BGIOSGA019172

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Revision as of 02:47, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019172| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019172, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA019172

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019172, complete gene.

LocusTag

OSJNBA0077J22.10

Ensembl Transcript ID

BGIOSGA019172-TA

Ensembl Protein ID

BGIOSGA019172-PA

Length

3786

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2954845..2958630

Sequence Coding Region

2954845..2954851,2954970..2955061,2955153..2955873,2955967..2956044,2956173..2956251
,2956350..2956449,2956600..2956685,2956762..2956844,2956989..2957131
,2957220..2957321,2957417..2957710,2957793..2957915,2958244..2958630

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2954845..2958630 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2954845..2958630 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGGAAAGAGGAGAAGAGGTCGCGCAAGGAGAAGCGGAAAGAAGCGAGATCGGAGAAGCAAAAACTGCGCTTTCTTTCTTGGGTTCAGCATCAGGGTGGCAAAAGCAAAAGTAAGAAGCCGGTAGAGCCATCTGTAGAATCAAGTCCAGTAGAGGAAAAGAAACCAAAGAAAGAACCTACCAATGTGAAGAAGAGAAGGAGGGATACTGAGGCTAAGCCCAAGTCCAAGTCCAAATTCCAGGAATATCTTGAGATGGAGAGGGGTGGAGCTGTGAGCAGAGAGGAGGATCTGGAGACAGAGAGGAGGCTAGCGAAGAAACTCAAGGTGAAGAAAGGAAAGTTGGGAGGTCCAGATGATGGTATGGACAGCCTTTTCGCGGACCTTGGATTTGAGGGCGACTTCGGTTCAGATGATGAGGCAAAAGAGTTTGATTGGAATACGGTGGATGATACTGAAGTAGACAAGAAAAAAGGGAAAAAGAAAAAGAAGAAAGTGAAGAATGATGCCACTGAGGAACTATATGATGGGGGTGTGAGTGAAGAGAATGATGAAGCAGTTCAGCAATCTGAGAATGAAGTAGACAAGAAAAAAGGGAAAAAGAAAAAGAAGAAAGTGAAGAATGATCCCACTGAGGAACTATATGATGGGGGTGTGGGTGAAGAGAATGATGAAGCAGTTCAGCAATCTGAGAATGAAGAGCCTAATGTGGTTGAACTACCTATGGCGTCAAAGGCGAAGTATGTACCTCCAAGTTTGCGTGCTACTTCCAATTCAGAATCAGAAGAGATCGCTCAGATTCGCCGGAGAGTGAGAGGGCTATTGAACAGGCTCTCAGAATCGAACGTGGAGTCCATTACTCAGGAAATTGCTGCGCTATTTAGTGTATTGTCCATTCCAAGAAGTACCGGTTGCCAGGTAATTGGCGATGAAGTTTTGGCAAGTTGTTCACGAGGACCTCGTGGAAATGAACAGTATGCTGCTGTATTTGCATCATTTGTTGCAGGTATGGCAAGCCTGGTTGGCATTGACTTCAGTGCCAAGATCCTTGCTTCTCTTGCAAAGTTGTTTGAGGATGAGTACTCAAAAGAAGATGGTCTATCTCTGAGGAATCTTACTTTACTGCTCTGTTATTTGTGCATATTTGATGTCATTTCAAGTGATCTTGTATATGATCTGCTATCAGTGCTGAGCAAGCGCTTGACAGAGCTGGATGTCTCGACTGTATTGACCATCCTACAGTGCTGTGGAATGAAGCTACGTGGAGATGACCCCAGTGCAATGAAAGACTTTGTTCTCAGTATTCAGAACTCTGTAAACCAGTTGAAACTGAAAGCGCACCCAGCTGGTCAAGATAATGGACAAGCAGAGATGCATAGCAAAAGAATGGAATTTATGCTCGAGACAATATGTGACATTAAGAACAACAAAAAAAGGCCCAAAGAGGATCCTGCACACCACACTCGCATAAAAAAGTGGCTTCAAAAGCTGAAAGCAGAAGATGTCCTCTTGCGCGGGTTAACATGGAATAAGCTTTTGGATCCTGATAAGAAAGGGCAGTGGTGGTTGTCTGGGGATGTTTCATCCACTGTAGGCAATATTGAAGAAGTTGCGGCAGTTATAAGCAAGGAGGTTGTTGAAGCACAAAAACTTGTTCAGCTTGCAGCTGCTCAGCGGATGAACACTGACATACGAAGAGCAATCTTCTGCATTATAATGAGTGCTGAGGACTATGTAGATGCTTTTGAGAAGCTCTTGAGGTTGGACCTTTCCGGGAAGCAGGATCGGGAAATCATAAGGGTCATTGTGGACTGTTGTCTGCAAGAAAAGATGTTCAATAAGTATTACGCAGTCCTCGCTTCGAAGCTATGCAGCCATGATAAAAATCACAAGTTCAGCTTACAGTACTGCATCTGGGATCATTTTAAGGAGTTAGATAATATGGAGTTGAATCGATCCATGAATCTTGCAAAACTAGTTGCGGAGATGCTGGCAAATTTTACACTCTCACTTGCAACCCTGAAGGTTGTCAAAAACCTGGCAGTGGAGGTGATTCCAAAAAGGACCATTCATTTCCGAATGCTGTTTGAGACCTTACTACAAAAGGATGATGCGGTGGTGTGGAACGTCTTTACACGCATTGCTGGACTTCCAGAGCTTGAAATTTTGAGAGATGGCCTCGTGCTATTCATCAAGCAGCATGTTATTGCTAAGGACACCGGTAAGGACTTGGCTAGCAAATTCAAGATCGCAAAGAAAGCGCTTGATAATACTGCTGGAGTTTTGATGTAA</cdnaseq>

Protein Sequence

<aaseq>MAGKEEKRSRKEKRKEARSEKQKLRFLSWVQHQGGKSKSKKPVEPSVESSPVEEKKPKKEPTNVKKRRRDTEAKPKSKSKFQEYLEMERGGAVSREEDLETERRLAKKLKVKKGKLGGPDDGMDSLFADLGFEGDFGSDDEAKEFDWNTVDDTEVDKKKGKKKKKKVKNDATEELYDGGVSEENDEAVQQSENEVDKKKGKKKKKKVKNDPTEELYDGGVGEENDEAVQQSENEEPNVVELPMASKAKYVPPSLRATSNSESEEIAQIRRRVRGLLNRLSESNVESITQEIAALFSVLSIPRSTGCQVIGDEVLASCSRGPRGNEQYAAVFASFVAGMASLVGIDFSAKILASLAKLFEDEYSKEDGLSLRNLTLLLCYLCIFDVISSDLVYDLLSVLSKRLTELDVSTVLTILQCCGMKLRGDDPSAMKDFVLSIQNSVNQLKLKAHPAGQDNGQAEMHSKRMEFMLETICDIKNNKKRPKEDPAHHTRIKKWLQKLKAEDVLLRGLTWNKLLDPDKKGQWWLSGDVSSTVGNIEEVAAVISKEVVEAQKLVQLAAAQRMNTDIRRAIFCIIMSAEDYVDAFEKLLRLDLSGKQDREIIRVIVDCCLQEKMFNKYYAVLASKLCSHDKNHKFSLQYCIWDHFKELDNMELNRSMNLAKLVAEMLANFTLSLATLKVVKNLAVEVIPKRTIHFRMLFETLLQKDDAVVWNVFTRIAGLPELEILRDGLVLFIKQHVIAKDTGKDLASKFKIAKKALDNTAGVLM</aaseq>

Gene Sequence

<dnaseqindica>1..7#126..217#309..1029#1123..1200#1329..1407#1506..1605#1756..1841#1918..2000#2145..2287#2376..2477#2573..2866#2949..3071#3400..3786#ATGGCTGGTAAGCTTCTTATCAGTCTAACATGACTCTGCCGTGTGAAGCATCGAGCATTGTTTCTGCTCTGGTGAATTCTGATGTCATTGCAATGCTGTTCTTTCCTGTTGGTGTTTGTTTGCAGGGAAAGAGGAGAAGAGGTCGCGCAAGGAGAAGCGGAAAGAAGCGAGATCGGAGAAGCAAAAACTGCGCTTTCTTTCTTGGGTTCAGCATCAGGTTAGCATGCCAAATCCTTTATGCAAAGAAAACTGACATGCTTTGCTAGTTTGGGGATTTTAATTTAGGTGTACAAAATTTCTTGCATTAGGGTGGCAAAAGCAAAAGTAAGAAGCCGGTAGAGCCATCTGTAGAATCAAGTCCAGTAGAGGAAAAGAAACCAAAGAAAGAACCTACCAATGTGAAGAAGAGAAGGAGGGATACTGAGGCTAAGCCCAAGTCCAAGTCCAAATTCCAGGAATATCTTGAGATGGAGAGGGGTGGAGCTGTGAGCAGAGAGGAGGATCTGGAGACAGAGAGGAGGCTAGCGAAGAAACTCAAGGTGAAGAAAGGAAAGTTGGGAGGTCCAGATGATGGTATGGACAGCCTTTTCGCGGACCTTGGATTTGAGGGCGACTTCGGTTCAGATGATGAGGCAAAAGAGTTTGATTGGAATACGGTGGATGATACTGAAGTAGACAAGAAAAAAGGGAAAAAGAAAAAGAAGAAAGTGAAGAATGATGCCACTGAGGAACTATATGATGGGGGTGTGAGTGAAGAGAATGATGAAGCAGTTCAGCAATCTGAGAATGAAGTAGACAAGAAAAAAGGGAAAAAGAAAAAGAAGAAAGTGAAGAATGATCCCACTGAGGAACTATATGATGGGGGTGTGGGTGAAGAGAATGATGAAGCAGTTCAGCAATCTGAGAATGAAGAGCCTAATGTGGTTGAACTACCTATGGCGTCAAAGGCGAAGTATGTACCTCCAAGTTTGCGTGCTACTTCCAATTCAGAATCAGAAGAGATCGCTCAGATTCGCCGGAGAGTGAGAGGTGTGACTAAATTCCATCTTTATTTCCTTCTGCATAACAGGCTTCTTATCCCCTTTTTTGCATATGCATGACCTATTGTTTTCTATGTGTCAGGGCTATTGAACAGGCTCTCAGAATCGAACGTGGAGTCCATTACTCAGGAAATTGCTGCGCTATTTAGTGTATTGTCCAGTACTATTTTTTTCTCTTTTCAGTCTTCAAATATTATGCTACCAAATTTCTCCAGATATTTTCTTTTCGTTTGATTAATCACAAGTCACTTTTTATGGTTTTGTTTCCATTTATCTGTTCGCAGTCAGTTCCAAGAAGTACCGGTTGCCAGGTAATTGGCGATGAAGTTTTGGCAAGTTGTTCACGAGGACCTCGTGGAAATGAACAGTTAAGGATCTTTCACAATAGTCACGGGTGTATCTGTGTCCTTGTGGGTGTTTATTATCAATAACAAACTAATGAAATTGCTTTGTTAAACTGTACAGGTATGCTGCTGTATTTGCATCATTTGTTGCAGGTATGGCAAGCCTGGTTGGCATTGACTTCAGTGCCAAGATCCTTGCTTCTCTTGCAAAGTTGTTTGAGGTATGACTATTTCTACTATTACAAAGATGAATTGCAACTGTTGTTTTCTTTCATCTGTTTTGGATACTTGGGTTATGTTCTGAGTGACTATCACAGTTTATTTTTATTTTTAGATAAGTTAATATGTTGTCTTCTTTCCCATTGTGACAGGATGAGTACTCAAAAGAAGATGGTCTATCTCTGAGGAATCTTACTTTACTGCTCTGTTATTTGTGCATATTTGATGTCATTTCAAGGTTGGCATTTGAATGGAACATTACACTTCCTTTCTTTGGAACAGATAAATCCTAATCATCCTATCTAATATTGCAGTGATCTTGTATATGATCTGCTATCAGTGCTGAGCAAGCGCTTGACAGAGCTGGATGTCTCGACTGTATTGACCATCCTACAGTGTATGATATTAACAGTTCTTTAAATAAATAGTAATAATGCACAACTCACATTCCAGACCATTGTAGCTGTTCCACTGATTGGAATACTGCAGCATGTTTTATACTTCAGTTAAGCTGGGGATATGTTTTCATCTGGATGTACAGGCTGTGGAATGAAGCTACGTGGAGATGACCCCAGTGCAATGAAAGACTTTGTTCTCAGTATTCAGAACTCTGTAAACCAGTTGAAACTGAAAGCGCACCCAGCTGGTCAAGATAATGGACAAGCAGAGATGCATAGCAAAAGAGTAGGTTGCCTGTTTTATGGCTATTTAAGGAACATTACATGTAACCAATAGTTTTTGAGTTTGGTATCTGTTATATCTTACTGTGCAGATGGAATTTATGCTCGAGACAATATGTGACATTAAGAACAACAAAAAAAGGCCCAAAGAGGATCCTGCACACCACACTCGCATAAAAAAGTGGCTTCAAAAGGTTTTTACAAGAACTTATTTCCCAATATCTGGAATTGTAAATTGTGAAACTTCGCTGTTCATTTAACATTTAGTTTCTCTTATATGTGCCTGCAGCTGAAAGCAGAAGATGTCCTCTTGCGCGGGTTAACATGGAATAAGCTTTTGGATCCTGATAAGAAAGGGCAGTGGTGGTTGTCTGGGGATGTTTCATCCACTGTAGGCAATATTGAAGAAGTTGCGGCAGTTATAAGCAAGGAGGTTGTTGAAGCACAAAAACTTGTTCAGCTTGCAGCTGCTCAGCGGATGAACACTGACATACGAAGAGCAATCTTCTGCATTATAATGAGTGCTGAGGACTATGTAGATGCTTTTGAGAAGCTCTTGAGGTTGGACCTTTCCGGGAAGCAGGTGTGCTATCTTCTGTAAGTTCCATTGTTTTGCTCGTGTCTCTCTCAGTATTACCTATGCCATTTCCTCTATTTGCATGAAGGATCGGGAAATCATAAGGGTCATTGTGGACTGTTGTCTGCAAGAAAAGATGTTCAATAAGTATTACGCAGTCCTCGCTTCGAAGCTATGCAGCCATGATAAAAATCACAAGTTCAGCTTACAGGTATTGCATTTGTCATCTTTGTTATCTGCTCAACAACTGTCCTGTCTAACAAATTAGTGGATTGCTGCTTTGCTGATGTTGCTAGTAGATTTATTTTTCTTGATTGACTTAATAGGATGAAACATGTTACACGTATACATTATAATAAACTGATGGCCTGTTAACTTGCATTTTTCTACTATTGTGTTCTGTTTGTGATGCCATTCTCTCTAGTGATGATAGTTGTAATATGCTGGCCACTTGCGTACTTCCTTTTAATGGGTGATGGCAGAAGTTAACATTATTCTTCTAACTATGTCTTCTCTGGTTTGTTCTGCCGCTGTTGCAGTACTGCATCTGGGATCATTTTAAGGAGTTAGATAATATGGAGTTGAATCGATCCATGAATCTTGCAAAACTAGTTGCGGAGATGCTGGCAAATTTTACACTCTCACTTGCAACCCTGAAGGTTGTCAAAAACCTGGCAGTGGAGGTGATTCCAAAAAGGACCATTCATTTCCGAATGCTGTTTGAGACCTTACTACAAAAGGATGATGCGGTGGTGTGGAACGTCTTTACACGCATTGCTGGACTTCCAGAGCTTGAAATTTTGAGAGATGGCCTCGTGCTATTCATCAAGCAGCATGTTATTGCTAAGGACACCGGTAAGGACTTGGCTAGCAAATTCAAGATCGCAAAGAAAGCGCTTGATAATACTGCTGGAGTTTTGATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019172

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019172&oldid=47928"