BGIOSGA019176

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Revision as of 02:47, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019176| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019176, complete gene.| tag = OJ1504_...")
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Gene Name

BGIOSGA019176

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019176, complete gene.

LocusTag

OJ1504_G04.1

Ensembl Transcript ID

BGIOSGA019176-TA

Ensembl Protein ID

BGIOSGA019176-PA

Length

3738

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3024680..3028417

Sequence Coding Region

3024680..3024996,3025259..3025429,3025525..3025598,3025684..3025760,3025868..3025939
,3026128..3026196,3026742..3026788,3026918..3027041,3027117..3027185
,3027266..3027369,3027795..3027870,3028244..3028417

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3024680..3028417 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3024680..3028417 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTACTCGCATTCCTGGTACTGTAGCAGCTAGCGGGGTGTACTACAATGATCAATACAGAATGCCATGTAAGCTGAAAGGAATTCATTGCATGGCATTGAATTGTATACCGCAAAAAGCGAAGGTAAGGAAGTGCATGAATGGATATCAATCAACATTCAGGTTTTGTGTAAATGAGAAAAATGGACAAACCACCGGACAGTCAAATGGTTCCTTGATCCAACAAGGCCAGAATTTCCGGTGTCATTCTTATGGTTCTCATAACAGCAGTGAAACTAAAGAGTGCAGCCTTGAAGATGGCACTGATTCATACAGGGATTTTGAAGAACATTCAAGAGGAGCCTCCCAATTTTCAGATAATCAAGTTGCAGCAAAGAAAAAATCAGTCAAATCTAGTCAAGGGTTGGCTGAAGCTTGCAAATTTGTTTACAACGATGCAAAATTTGTGAATGAAAGAGCTCAAAATGATATTCTCTTGCTTTCACGTGGCATAACAAGGCTGAACAAACGTGCGTGCCAGGATGTTGCTGTTTTAGGGTCAGGATTTCTCAAGCTTGATGCTCGTGCAAGGAAGGACACTAAAAAAATTGACCACAGTGTGAAGGAAAGGGCAGCGCGGCTTACCCATTTTGCGAGAATATTAAAGGAACAGGCTCAGTCAGACTTGAAGAAAGCAGCAGATCAGCATTGGAGCGATGGTGCTTTGGAGGCAGATCTGCGACGAGCTGACTCGGTTGTTAGACGACGTGCCATGGAAGATGCTTTCATGGCTTTAAAGTTTGTTCGGGATATCCATGACATGATGGCAAACAGATTACAAGAGCAATTCGCAAAGGATGGTTCCTCTTCTCCTGCTAATTCAAGAAGTTTCATCACCCTTGAGAAAAATGGAAATACCTTCGAGCTGTTTCCTCATGAAGTTTCAACGGACCAGATTACCGCCATAGAGCAAGCATACTGGAGTATGGCATCTGCGTTGTCTGAGGCTGATGGTATCGACTACACAGATCCTGAGGAGCTTGAGTTGTTAGTAGCAACTCTCATTGACCTGGACGCCATGGATGGGAAAAAGAGTGTTTCCTTACTTGCTGAATGTTCAAGCTCTCCAGATGTTAATACCAGGAAAGCTTTAGCTAATGCACTGGCTGCAGCTCCATCCATGTGGATTCTTGGAAATGCTGGGATGGGTGCATTACAGAGATTGGCTCAAGATTCCAATTATGCTGTAGCCAGGGCTGCAACAAGAGCCATCAATGAACTCACAAAGCAATGGGAGCTTGAAGAAGGTGACAGCCTGAGGTTTGTACTGAATCAAAATATGGTTTCTAAAGAGACAGCCGATGACAGTGCAGCAGCAGATGACACCAGGTGA</cdnaseq>

Protein Sequence

<aaseq>MATRIPGTVAASGVYYNDQYRMPCKLKGIHCMALNCIPQKAKVRKCMNGYQSTFRFCVNEKNGQTTGQSNGSLIQQGQNFRCHSYGSHNSSETKECSLEDGTDSYRDFEEHSRGASQFSDNQVAAKKKSVKSSQGLAEACKFVYNDAKFVNERAQNDILLLSRGITRLNKRACQDVAVLGSGFLKLDARARKDTKKIDHSVKERAARLTHFARILKEQAQSDLKKAADQHWSDGALEADLRRADSVVRRRAMEDAFMALKFVRDIHDMMANRLQEQFAKDGSSSPANSRSFITLEKNGNTFELFPHEVSTDQITAIEQAYWSMASALSEADGIDYTDPEELELLVATLIDLDAMDGKKSVSLLAECSSSPDVNTRKALANALAAAPSMWILGNAGMGALQRLAQDSNYAVARAATRAINELTKQWELEEGDSLRFVLNQNMVSKETADDSAAADDTR</aaseq>

Gene Sequence

<dnaseqindica>1..317#580..750#846..919#1005..1081#1189..1260#1449..1517#2063..2109#2239..2362#2438..2506#2587..2690#3116..3191#3565..3738#ATGGCTACTCGCATTCCTGGTACTGTAGCAGCTAGCGGGGTGTACTACAATGATCAATACAGAATGCCATGTAAGCTGAAAGGAATTCATTGCATGGCATTGAATTGTATACCGCAAAAAGCGAAGGTAAGGAAGTGCATGAATGGATATCAATCAACATTCAGGTTTTGTGTAAATGAGAAAAATGGACAAACCACCGGACAGTCAAATGGTTCCTTGATCCAACAAGGCCAGAATTTCCGGTGTCATTCTTATGGTTCTCATAACAGCAGTGAAACTAAAGAGTGCAGCCTTGAAGATGGCACTGATTCATACAGGTAATATTTGTACTACATTACAGGATAATGAGCCTACTTTTTCCCCAGATGACCAATGTTTATTGAATTTGTGTATCTGGACATGCAAATTCATTATCATCCTAATTCCTATCTTTCTACTGTCTTTAAATGACACGTCCTATGTACAAAGCTGAACACAGTCATTTTTAAGATGGACATAACCCATCCAACATTTTTTATTTTGTTTTTATGGTTGACATAACCTGTTTGTCTTTTTAAATTTCTAAATCTATTGTTGCAGGGATTTTGAAGAACATTCAAGAGGAGCCTCCCAATTTTCAGATAATCAAGTTGCAGCAAAGAAAAAATCAGTCAAATCTAGTCAAGGGTTGGCTGAAGCTTGCAAATTTGTTTACAACGATGCAAAATTTGTGAATGAAAGAGCTCAAAATGATATTCTCTTGCTTTCACGGTATTCCTTTCATAATAATCTTTAAAAAATATATCCCTTGGTAAAAACAAGAGATTTGTACATAACAAAATTATGTGTCTCATTTCTAATCCTAGTGGCATAACAAGGCTGAACAAACGTGCGTGCCAGGATGTTGCTGTTTTAGGGTCAGGATTTCTCAAGCTTGATGGTACATGATTTCCCTTTTAGCTGACAAGCTCTTAGTTTCTTTGGTATGATTTAACTATCCATCTAAAGCTATTATTTACTGAAAGCTCGTGCAAGGAAGGACACTAAAAAAATTGACCACAGTGTGAAGGAAAGGGCAGCGCGGCTTACCCATTTTGCGAGAGTATGATTTTTCAATATGTTTAGATAATTGAACCATCCATGTGCTTTACTTTTTGTTCCTTTCTACCTCTATGTACTTTAGCCTGTTACCTCTGTATGCATATTCAGATATTAAAGGAACAGGCTCAGTCAGACTTGAAGAAAGCAGCAGATCAGCATTGGAGCGATGGTGCTTTGGAGGTCTGTGCTAGTTCTCTGTCCTTCACTTCATTTTGCTGGAACTAGTTGAAAATACTGAGCGATATATAGCTGCCAAATGTTTCTGGAGTACCGATGTTGTTTTATTACCGGTGTTAACCTTCTTTGTGTGTGTTACTATCAAATTCATGGGTTATGCTTATATAATACACTATTTATTTGCAATGCAGGCAGATCTGCGACGAGCTGACTCGGTTGTTAGACGACGTGCCATGGAAGATGCTTTCATGGCTTTAAAGGTAGCCCAACTTGTTCTTTTCCATCTCTACTGTCTTTAAATGCAGCAAGTTGGTTTAGTTTTCATTACAATTTACAAGCTAAGATATGCAAGATTTTAGGATGAAAACATAATCAGTTATTTTGATTTATGAAAGCAAGATTTATAACTCAAACTCGTAACAATTCTTGATTATTTATTTGCTTAACATCATGCCCCATACATCATATTTCCAACAAATTTTGTTTGTTTTATGAGCCTGCTGTCATGACCGGTTTGCTGTTATGCATTACATTAATAGCTAAGGTTTAGTTTGATTGGCTTAGCAGAAAATAAATAATCATATATCTAGACATGAATAACTAGCCTCAGACTTAATCATACTCTATCTACACCTTGCCATATCGACATTTTTTTGGTATTTGTTGCTGCACAAAAGGAAAAGTTTATGGATCACATACTAGATGTTTTGATCAATTTGACCCTTCCCAATTCTCGGTATTTCTCATACAGCATCTTGATTATTAAATATTACACTTGTATGTAATTCTGTAATATTTAGTGCAGTTTGTTCGGGATATCCATGACATGATGGCAAACAGATTACAAGAGCAGTAAGTTCATTTCAAATGCTCATTTCTTAGAGAAATTCAATGTTTAATTAAGGAGGGTATGATTTTACTTCGCTGGTTCATATTCATTGTTAGAACAATCTGATTTGTACTAAAATAAATATACTTTAGATTCGCAAAGGATGGTTCCTCTTCTCCTGCTAATTCAAGAAGTTTCATCACCCTTGAGAAAAATGGAAATACCTTCGAGCTGTTTCCTCATGAAGTTTCAACGGACCAGATTACCGCCATAGAGGTTATATCTAGATTAACTTATTTAGCAGAAAACTCCCATCATATGGCTAATTTTGGTTAAATTTGTTATCCATAGCAAGCATACTGGAGTATGGCATCTGCGTTGTCTGAGGCTGATGGTATCGACTACACAGATCCTGAGGAGGTGAAACATTTTTTACCCACATTATAAAGATGAACCTTCCTATGTCCATCTTTCTAACCTTCTCTTTTCTGTTTCTGAAGCTTGAGTTGTTAGTAGCAACTCTCATTGACCTGGACGCCATGGATGGGAAAAAGAGTGTTTCCTTACTTGCTGAATGTTCAAGCTCTCCAGATGTTAATACCAGGTATATCACAGCATTATTGAGTACAGTTACCTGCAATGTATGTTGCTTCTGCGTTGTTAGCAAGATCGAATCCATCTTCAAGTACAGAAAATGAGAATATACAGAAAATGAGAGAATGTTAATATAAAGAATGCAGATTTGATATGTCCTGTCTCTATACATCATGGCTATGTGCCAAAATAGCTAATTAGCGACAAAAAATAATTTATGGATAAAACTATTATGTATATGTCCTTAGTGACTTAAAAGCCAATTCAAAAAAGGAACTATGTTGAAAATACCGTAGAATTAACTCAAAAATTAAGTCTTAAATAAATTTTGGCGGTGGCTGATTCGTTGTAGGGCAAACGATGAGGCTCTATGTTATATTTCTGAATTACATCGCATTCGTATTGACCATTATTATGTATGTATACCCCTTGTAGGAAAGCTTTAGCTAATGCACTGGCTGCAGCTCCATCCATGTGGATTCTTGGAAATGCTGGGATGGGTGCATTACAGGTGAACATAAATCTCTCCTATAGCTCCTCCTATTGACAATTTCTGATTACCTTCATATCAGAATTTTTTGTATGAGAAATTTCTAAGCCTCTCAGAGCCAGGAATCATGCTTGCCCCACAGTTCAAATTTGATCTTCATATTCATTTGTAACCATGATTTCCAAGCTGTACAAACTGAAGCTCATTTCTCTCTTGTGATCAATTATCTAAAAAAGGTTAAAATCCATAGTACAACGCAGCCTGTTTCTGCATAATAATCAGTTATTGTTGAATGAACTTGCTAGTTGCTACTTGCTACATGAACTAGTTTCTTTGAAGTTACTTGGGTAACTATTGATGTTTCATCAATCTTTGCTTGCTCTTTCAATTGCAGAGATTGGCTCAAGATTCCAATTATGCTGTAGCCAGGGCTGCAACAAGAGCCATCAATGAACTCACAAAGCAATGGGAGCTTGAAGAAGGTGACAGCCTGAGGTTTGTACTGAATCAAAATATGGTTTCTAAAGAGACAGCCGATGACAGTGCAGCAGCAGATGACACCAGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019176