BGIOSGA019183

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Revision as of 02:47, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019183| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019183, complete gene.| tag = OJ1504_...")
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Gene Name

BGIOSGA019183

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019183, complete gene.

LocusTag

OJ1504_G04.12

Ensembl Transcript ID

BGIOSGA019183-TA

Ensembl Protein ID

BGIOSGA019183-PA

Length

5477

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3088620..3094096

Sequence Coding Region

3088620..3088791,3090079..3090170,3090393..3090455,3090578..3090676,3091006..3091164
,3091700..3091771,3091847..3091979,3092093..3092157,3092296..3092371
,3092516..3092617,3092804..3092996,3093856..3094096

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3088620..3094096 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3088620..3094096 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCACCGCCTCCGGCGACGGCGGGGACGGCGGCGGCGGCGGGGATGGCGCCTCGTCGGCCGCGGGGGGCGGCGGGAGGCGGATCCCGCCCGCCTCGTCCATGCCGTGGGTCCGCAACCTCCGCCGCTTCGTCGGCACGGGCGCCGGCCTCGGATCCGAGGCCTTGATGGAACTGGAAACAAAAAGGATACTGCTTGAGATTTTCAAGGAGCGCCAACGGAAGAGTATGGAAGCTGGTGCCATTCCAAGTTTTTATAAGAAGAAACCTGAAGATGGATCCATTAGCAATAGAGTTCAGAAATTGGCAAAGTACAGGTTTCTAAAGAAACAATCTGAACTTCTGCTTAATGCTGATGATCTTGATGCCATGTGGGTTTGTCTCAGAGAAAATTGCGTTATTGATGATGCTACAGGTGCTGAAAAGATGAATTATGAAGACTTTTGCCATATTGCAACAGTATGCACAGAGCAGATCGGCCAGAAGTGCAAGCGTTTCTTCAGCCCTTCAAATTTTATGAAGTTTGAGAAGGATGATTCTGGGAGAATTGCAATCCTACCATTTTATCTTTATGTTATGCGGACAGTATCTCTCACACAAGCGAGAATTGATATGAGTGAGCTTGATGAGGATTCTGATGGTTTCCTTCAACCTCATGAAATGGAAGCATACATAAGAGGGCTTATCCCCAATTTGGCACAACTGCGTGATATGCCATCAGCATTTGTTCAAATGTACTGCCGCATAGCTGCACGCAAGTTCTTTTTCTTCTGCGATCCACACAGACGAGGGAAAGCATGCATAAAGAAAGTATTGCTGAGCAATTGTCTTCAGGAACTTATGGAACTACATCAGGAGAGTGAGGAAGAGGTTACTGATACTGAGCAGGCTGAAAATTGGTTTTCCCTGACGTCAGCTCAGCGCATTTGTGATATGTTTCTTGCACTTGACAAAGATACAAATGGAACATTGAGCAAACAGGAGCTCAAGGAATATGCAGATGGCACATTGACTGATATCTTCATTGAAAGAGTTTTTGATGAGCATGTACGCCGGAGCAAAGTTGGAGGTGGCAACAGTCGTGAAATGGACTTTGAAAGCTTTCTTGACTTTGTTTTGGCTCTAGAAAACAAAGATACTCCTGAAGGATTGACATACCTATTTAGATGCCTTGATCTTAATGGAAGGGGATTCCTGACAACTGCTGATATCCATACATTATTTAGGGATGTACACCAGAAATGGATTGAAGGTGGAAACTATGAACTTTGCATCGAAGACGTGAGGGATGAAATCTGGGACATGGTAAAGCCGGCAGATCCTCTCAGGATCGCACTAACAGATCTTCTATCTTGCAAGCAAGGCGGGACTATTGCCAGCATGCTTATAGATGTGCGCGGCTTCTGGGCCCACGACAACAGAGAGAACCTCCTCCAGGAAGAGGAAGAGCAAGTGGAAGAGGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MSTASGDGGDGGGGGDGASSAAGGGGRRIPPASSMPWVRNLRRFVGTGAGLGSEALMELETKRILLEIFKERQRKSMEAGAIPSFYKKKPEDGSISNRVQKLAKYRFLKKQSELLLNADDLDAMWVCLRENCVIDDATGAEKMNYEDFCHIATVCTEQIGQKCKRFFSPSNFMKFEKDDSGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPSAFVQMYCRIAARKFFFFCDPHRRGKACIKKVLLSNCLQELMELHQESEEEVTDTEQAENWFSLTSAQRICDMFLALDKDTNGTLSKQELKEYADGTLTDIFIERVFDEHVRRSKVGGGNSREMDFESFLDFVLALENKDTPEGLTYLFRCLDLNGRGFLTTADIHTLFRDVHQKWIEGGNYELCIEDVRDEIWDMVKPADPLRIALTDLLSCKQGGTIASMLIDVRGFWAHDNRENLLQEEEEQVEEA</aaseq>

Gene Sequence

<dnaseqindica>1..172#1460..1551#1774..1836#1959..2057#2387..2545#3081..3152#3228..3360#3474..3538#3677..3752#3897..3998#4185..4377#5237..5477#ATGAGCACCGCCTCCGGCGACGGCGGGGACGGCGGCGGCGGCGGGGATGGCGCCTCGTCGGCCGCGGGGGGCGGCGGGAGGCGGATCCCGCCCGCCTCGTCCATGCCGTGGGTCCGCAACCTCCGCCGCTTCGTCGGCACGGGCGCCGGCCTCGGATCCGAGGCCTTGATGGGTCAGTGCCGTTCGCCGCCGCCCCATCCCTTCTCCTTTCCTGTGGTGTTTGGCCGGGCCGGGATTCCGTTCCTCATCGTGGAGATGGCGGTGCGGTTAGGGTTTACGCGTCTCTTCCATGAAAATGATGATGTGATTGGGGAGGAGAAATTATGGGCCCCCCTCTAGTGGGAAGGATTATTATTATGTGTTCCTCAGGTTTGAGATTGCATAACGCAGCGTGTGGATGCGTGGAATGGGCTCGCTCTTGCTTGATTTGCAGTGGGTGATTTGGGTGGAGCGGCATAGTTTCTTGACATTTGACGAAGGTCACAACTCACAAGATGTTCAGGCTTCTGGGAGTCCTCTGCACAGAGGAAGGCTTGCCGGCTGTGGACGCAGTCAGTAGTGGCAATGTAGGGTGATGGGCTGGGATTTTGAGTCTTCGTCGTGGAGATGGCGATAAGGTTAGGGTTTTCGCGTCTCTTCCACGAAATGGTGATGCTATTGGGGAGTAGAAGTTAGGGTGCTCTAGTGGGAAGGGTTACTGGATGAGTTATAGTGCCTCAGGTTTGAAATTGCATAATGCAGCCGGTGGATGTTGAAATGAACTCACTCTTGCTTGATTTCCACTGGGTGATTTGGGTGGAGAGGCATATGCTTTTCACCTTTGAGGCTTTCACAAAAGTCACAAGATGAAATCTTCTGGGAGTCCTTTTCACATACTCCCTCCATCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATCACTAGGATTGGGTTTTTTTTGGTACGTAGGGAGTAGTAACTAGTAAGGCACTGTAGGCTTGTCGGCCACAGACGAGTAAGTAGTGGTAGGAGTAGTAAGGCACTGTAGGCTTATCGGCCACAGACGAGTGAGTAGTGGCATTGTAGGAAGACAAACATCAGATTTTAGTCATGTGCGTTTTACTTGTTGATACGTAAGCTGAGGCTATTGGTAATGTGGCTTGAGGATATCTCCCAGCTAGTTCAGGAAAACTTTGATCCATATAGTGCATATAGTTGAGGCTTAGTTGTCCTTTTCTGTTTTAATCGCATTTGTGGAATTAGGGACTATAAGATAAGATGTCTCATTGGCATGCAATTTTTGGGTGCATTTGCTACAATAACATGGTTGCTTTGTTGATCAATATTCGCATGTTTTTCATGTGCCTGCTTGTAAACTATTTGTTTTAAACCTTTGATCGCAGAACTGGAAACAAAAAGGATACTGCTTGAGATTTTCAAGGAGCGCCAACGGAAGAGTATGGAAGCTGGTGCCATTCCAAGTTTTTATAAGAAGGTGCACAGCTTGGTTCAGTTTATTGGATACCGAGATTTCATAATCTTTTACGTTATTATCAAATTCGCAGCGTAAGCAAAATAAAGATCTTGACAACAGTAGCTGCTTTGACAAACGATGATAAAAAAGATATTGGTTTCCTAAGTATCATAGTTTAGTTCTGATTCAAGAATGCATTGCCTTCTCGTCAACTCATGAAATTAATATCTCCTTTATGGACAGAAACCTGAAGATGGATCCATTAGCAATAGAGTTCAGAAATTGGCAAAGTACAGGTTTCTAAAGGTAATGTTTGATTTCTTCTTATTGCTATTGAGATATTCGTGTTTGGTTGGCAGCTTACTTGCATTGCCATTTAACCTACTCATGGTTTGGGCCTTACAATAGTTATTTTAAACAAATGGCAGAAACAATCTGAACTTCTGCTTAATGCTGATGATCTTGATGCCATGTGGGTTTGTCTCAGAGAAAATTGCGTTATTGATGATGCTACAGGTGCTGAAAAGGTAGGTTGTTTTATGTACCTTTATTTCAGACCAGCAATCTGCCAGTTTTTAATCTAAAAAGTTCAGATCCTTGGATGACAATATGCATCATATGTCTACAATATGCACGCAAAAAACTCATCCAAAATGAAAAAAAATCTTTTGGTGTGATATGCTTAATCTCTTTTAGGGGATTTTTTTAGTTCATTGCTACTTGCTTGAATTTGGTGTACATACTGCCCTGTAAATCTAACGATGATCCTTGTATCTGTATTTGTGTTTGGTGTAGTTGTTCATGTAGCAGTTTTGGTTCGATTACCTTGCTCATCTATTTTTCTGGAGTCTTGCAGATGAATTATGAAGACTTTTGCCATATTGCAACAGTATGCACAGAGCAGATCGGCCAGAAGTGCAAGCGTTTCTTCAGCCCTTCAAATTTTATGAAGTTTGAGAAGGATGATTCTGGGAGAATTGCAATCCTACCATTTTATCTTTATGTTATGCGGACAGTAAGTTATTTTCAAACAAATATTATTAGGATTACCAAATTTGTTTTGTGTAATATTTGATGTCTTCCATTTGCATCTCTGATAAACTGGTAATTCTAGCCCACACCATGCTTCTTTTCCAATTTCCCATTGGATGTACTCCTAGTTCTTTTTACTAAATGACAAAGTAGGCTAGTTATATGTTATCATCAGTTGCTCCATTATTATTGTTAGTTAGCTTTTATTAGAAAAGCCATTCAAAGCAATAACACCAAATCGCTATTACAATACAAGAACATGAGTCATGTCATTCACCAAAATAAACTTGATGGGTGTAACAATGCCCAAGGAAGCTAAAATCGTTTCCTCCTATTACATCAGGATGGGTCACATTTAAGTCTGAAACATCACATAAACTCTGAATTCCCATCCAGCAAATTTTTTGCTGAATCCATATTTATAGCTATAACTTATTTCAAATCATTATCATGCATGCTACTGTTTCTTTTTCCTTGCGTATACAATTGTATGACATTCTTTTAACTAATTTCTTCAGGTATCTCTCACACAAGCGAGAATTGATATGAGTGAGCTTGATGAGGATTCTGATGGTTTCCTTCAACCTCATGTAAGGACATCCTAACACACGTTAACGCCATTGCACACCTTAGTAATGTTTGACATGACTTAATTCTATTAACAGGAAATGGAAGCATACATAAGAGGGCTTATCCCCAATTTGGCACAACTGCGTGATATGCCATCAGCATTTGTTCAAATGTACTGCCGCATAGCTGCACGCAAGTTCTTTTTCTTCTGCGATCCACACAGACGAGGTTTAGAACCAACCTTTAAGTGCAGTTGTATTAATATGCAAATTACTTTAATCGATACATTTATTCTTTGTAAGAGTAGCTAACTGTTTGTAATCGATACATTTTTTTTTCAGGGAAAGCATGCATAAAGAAAGTATTGCTGAGCAATTGTCTTCAGGAACTTATGGAACTACATCAGGTAATAGAAGAAACATATTTCATGGTTTGCTGGTAGAAACTCTGTAAATTTTATACCCTTATAGGCTTACAACATAATATTGCTGTATCCTATATTCTGTTTCTTTGTGGTTACGATTCTTATCAACTATATTTTCAGGAGAGTGAGGAAGAGGTTACTGATACTGAGCAGGCTGAAAATTGGTTTTCCCTGACGTCAGCTCAGCGCATTTGTGGTATGCCAGCCACCCTCATGTCTGGTTTTCTGATTTTTCTTTTGGGTAGCAGTAGCACACAATCAGTGCTCTCCAAAAAGTTACCTTTTGCCATTCTATTGCAGTATAGTTGATGATCTACCTAATGCGCATGGTCCCATGCAGATATGTTTCTTGCACTTGACAAAGATACAAATGGAACATTGAGCAAACAGGAGCTCAAGGAATATGCAGATGGCACATTGACTGATATCTTCATTGAAAGAGGTTAAAATCCATTATCTGCTCTCATGATACTTTATGTTTGTCTTTCTAGACGTCCTAACCAAAAAGAAACATGCAATTGCAGTATGTGAAGTTTTTTTATGCATTATACACATAGATCGTGGTGTATTTCATAAATCTTTGGTCGTGAATAGATAAACAATATTATAACTTCTTTTCTTTTTCCAGTTTTTGATGAGCATGTACGCCGGAGCAAAGTTGGAGGTGGCAACAGTCGTGAAATGGACTTTGAAAGCTTTCTTGACTTTGTTTTGGCTCTAGAAAACAAAGATACTCCTGAAGGATTGACATACCTATTTAGATGCCTTGATCTTAATGGAAGGGGATTCCTGACAACTGCTGATATCCATACATTATTTAGGTATGTACGGGGAATCTGTATTGTATATTTTTTGGGCAGTGACGGAAACATCTGCTTCGGAAAAGTGGCTTAAGCAGGAGAAAATTGATTGTTGTTCATTAGAATAGCTTTTCCATGGCATATAAAAGTTGAGCTAGCATTGTTTTTGTCAAAATTGGGAACAGCCTCTGCAATCACATGCTGAATAATTTACTGCTATTCTATTCCTCTGTTAACTTTTATCTCGGAAGAAAAGAAAGGAGGATGTGAGAGTTAGCATTCCTGCCTGATACAATCTTCCTAGATTTAATCTGCCATTTTGTTTGCTTGCTGAACTATTAGACAGTTTTGCTGGCCTTAGTGGGCAGGACATCACCATGACATTGGTTCAATCGCACATAGGTGTCGCTGTTTCTTACATACTCACAAGTGCAACATCTTCATTTGCACGTGTACATATTTTTATATACTTCAGTATTTTCTCAGTTTCTTATGAGAACTAATTAGTAAATAATTAGGAAATCTTGATGTGTTCAATAGACTATAGGAATGGTTCAAACTAGATGTCATACATATTTGTAATATCCTTTGGACCTTTGTAAGGCCTTGTTCGGTTAATCCCAAGAGGGAGGGATTGGAGGGGATTAATTCCACACCAATACACCACAATAGGTGTGGAATAAATCCCCTCCAAAACCGTCTCAATCCCCTTGTGGGAGGGATTAACCGAACAAGGCCTAAGTGGTTTTACCATCAAAAAACCATTTTGGAACAGTTATTCATATTAAACTTCTAATAGGTTTGCCAGTTAGATCACCAGTCATCATTATTTTTACTTCGATTGTTCATCTTACTCAAGCAACTTCGTCATCGTTTCCAGGGATGTACACCAGAAATGGATTGAAGGTGGAAACTATGAACTTTGCATCGAAGACGTGAGGGATGAAATCTGGGACATGGTAAAGCCGGCAGATCCTCTCAGGATCGCACTAACAGATCTTCTATCTTGCAAGCAAGGCGGGACTATTGCCAGCATGCTTATAGATGTGCGCGGCTTCTGGGCCCACGACAACAGAGAGAACCTCCTCCAGGAAGAGGAAGAGCAAGTGGAAGAGGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019183