BGIOSGA019208

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Revision as of 02:47, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019208| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019208, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA019208

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019208, complete gene.

LocusTag

OSJNBA0059G01.13

Ensembl Transcript ID

BGIOSGA019208-TA

Ensembl Protein ID

BGIOSGA019208-PA

Length

6399

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3448639..3455037

Sequence Coding Region

3448639..3448815,3449402..3449635,3449885..3450058,3450155..3450259,3451033..3451110
,3451777..3451858,3452271..3452433,3452852..3453187,3453263..3453481
,3453578..3454196,3454275..3454340,3454855..3455037

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3448639..3455037 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3448639..3455037 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCCGTTGGCTCCAGTCCGCGGGTCTGCAGCACCTCGCCGCCTCCTCCACCTCCTCCTCCTCCGCCTCCACCGCCGGTGGTGGGGTGGACCCGCGCGCCGGGGGTGGTGTCGGCGTCGGGGCCCTCGGTGGCGGCGCTGGCGGGGGGAGCTTGCTCCCGAGCCTCCTCATGCAGGGATATGGACCACAGTCCATTGAAGAGAAGCAGAGACTTTATATGCTGTTGAGAAGTTTGAATTTTAACGGAGAGACCGCACCTCCATCAATTTCTGAGCCCTATACGCCAACGGCTCAGAGCTTTGGCGGTGGTAATTCCCTAGAGGGGTTTTATTCACCTGAGCTTAGAGGTGAACTTGGAGCTGGCTTGCTGGATCTTCATGCTATGGATGACACCGAGCTACTTTCTGAGGATGTAGCTTCAGAACCATTTGAGCCTTCACCCTTTATACCAAAGGAAATGGATGAGGATGATGATGACATGCTTCCAGGAAGCCAGCCAGGCCCATCAGACAACTATAATGCAGTGGCCAATGAAAAAGAGAGCACTGCCAGAGAAAATAATGTAGCAAAAATTAAAGTTGTGGTAAGGAAGAGACCTTTGAACAGAAAGGAGGTATCTCGTAAGGAAGAAGACATCATAACTGTGCATGATTCATCATCTTTGACAGTTTATGAACCTAAGCTAAAGGTGGACTTGACAGCTTATGTGGAAAAGCATGAATTTTGTTTTGACGCTGTCCTGGATGAGCAAGTTTCGAATGATGAGGTATACCGCGAGACTGTGGAGCCCATTATACCAATAATATTCCAAAGAACAAAAGCAACATGTTTTGCTTATGGTCAAACAGGTAGTGGCAAGACATATACGATGCAACCTTTGCCTCTGAGAGCTGCACAAGACATGGTTCGCCTTTTGCATCAGCCTGTCTACCGTAATCAAAATTTTAAGCTGTGGCTTAGCTACTTTGAGATATATGGTGGGAAGCTCTTTGATCTTCTCTCTGATAGAAGACAGCTCCTGATGAGGGAAGATGGCAAGAAACAAGTTTGCATTGTTGGTCTGCAAGAATTTGAGGTTTCTGATGTTCAGATTGTCAAGGAATATATTGAGAGAGGAAATGCAGCCCGGAGTACAGGGTCAACGGGGGCCAATGAAGAATCATCAAGGTCACATGCTATTCTGCAGTTGGCTATCAAGAAACATATCATAGTAACTGATACCAGGCGACAAAGAGATCGAGATGCTAATGAATCTAAAAACACAAAGGCTGTGGGAAAAATTTCATTTATTGATCTTGCTGGAAGCGAGCGTGGAGCCGATACAACAGACAATGATAGGCAGACGAGAATTGAAGGAGCTGAGATAAACAAGAGCCTGCTCGCTCTGAAGGAATGCATTCGGGCCCTTGATAACGATCAGATACACATTCCTTTCAGAGGAAGCAAGCTTACAGAAGTTCTTCGTGATTCATTTGTTGGTAACTCTAGGACGGTGATGATCTCTTGCATTTCTCCAAATGCAGGTTCATGTGAACACACATTAAATACCTTGAGATATGCTGACAGGGTTAAAAGTCTCTCAAAGGGCAGCAATACAAGAAAAGAGCAGCCCACTGGGCCAACTATACCTTCCAGCAAGGATTCTTCATCTGCCCCTTCATATCCTATGCCCATCGAAACTGAGGAAATTGCCAACCAGATTCAAGAGAAGAGACCTGTTGAAACTTCTAGGAAGGCTGCTGAAAATTTCACCTCGAACTCTTCTATGGAACCTGACAGGAATCCTGTTAGTATGATTCCAAGTTATTCTAATAGAGGAAAAGAAGAAAATGGTTCATCTGGCTTGAATGACAGAGAACGGGTTGATCTGAATTCCAGTCGAATTAGCTACAACAGTAAACCACAGTCTGTTCAGAGTTCAGCAAATTTACAAGAAGAGGAAAAGGTTACAAAAGTTTCTCCTCCTCGGAGAAAGGCCTATAGGGATGACAAACCTGAAAGGCAGAGCAACTATGCGAAGAAGGATAGTGGACCTGAGACAAGTAGGCCTGGGTATAAGGTGCAGCAGGCAAAGCAGTTGCAACAGCAACAACGGCCGACATCTGCTTCAGCTTCTCAGAATTCATCAAGGCAATCTGAAAAGGAAAGTTCTTGTGATGATGTGGAAATAGATGCTATTCTTGAGGAAGAGGAGGCTCTCATAGCAGCACACAGGAAGGAAATCGAGAACACTATGGAGATTGTACGAGAAGAGATGAACCTTTTGGCAGAAGTTGACCAGCCAGGGAGCCTTATTGACAACTATGTAACACAACTGAGTTTTCTTCTGTCACGCAAGGCTGCTGGCTTGGTCAGCCTCCAAGCACGCCTGGCGCGGTTTCAGCATCGCCTCAAAGAGCAGGAGATACTCAGCCGTAAGAAATCTTCCAGATAA</cdnaseq>

Protein Sequence

<aaseq>MARWLQSAGLQHLAASSTSSSSASTAGGGVDPRAGGGVGVGALGGGAGGGSLLPSLLMQGYGPQSIEEKQRLYMLLRSLNFNGETAPPSISEPYTPTAQSFGGGNSLEGFYSPELRGELGAGLLDLHAMDDTELLSEDVASEPFEPSPFIPKEMDEDDDDMLPGSQPGPSDNYNAVANEKESTARENNVAKIKVVVRKRPLNRKEVSRKEEDIITVHDSSSLTVYEPKLKVDLTAYVEKHEFCFDAVLDEQVSNDEVYRETVEPIIPIIFQRTKATCFAYGQTGSGKTYTMQPLPLRAAQDMVRLLHQPVYRNQNFKLWLSYFEIYGGKLFDLLSDRRQLLMREDGKKQVCIVGLQEFEVSDVQIVKEYIERGNAARSTGSTGANEESSRSHAILQLAIKKHIIVTDTRRQRDRDANESKNTKAVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSRTVMISCISPNAGSCEHTLNTLRYADRVKSLSKGSNTRKEQPTGPTIPSSKDSSSAPSYPMPIETEEIANQIQEKRPVETSRKAAENFTSNSSMEPDRNPVSMIPSYSNRGKEENGSSGLNDRERVDLNSSRISYNSKPQSVQSSANLQEEEKVTKVSPPRRKAYRDDKPERQSNYAKKDSGPETSRPGYKVQQAKQLQQQQRPTSASASQNSSRQSEKESSCDDVEIDAILEEEEALIAAHRKEIENTMEIVREEMNLLAEVDQPGSLIDNYVTQLSFLLSRKAAGLVSLQARLARFQHRLKEQEILSRKKSSR</aaseq>

Gene Sequence

<dnaseqindica>1..177#764..997#1247..1420#1517..1621#2395..2472#3139..3220#3633..3795#4214..4549#4625..4843#4940..5558#5637..5702#6217..6399#ATGGCCCGTTGGCTCCAGTCCGCGGGTCTGCAGCACCTCGCCGCCTCCTCCACCTCCTCCTCCTCCGCCTCCACCGCCGGTGGTGGGGTGGACCCGCGCGCCGGGGGTGGTGTCGGCGTCGGGGCCCTCGGTGGCGGCGCTGGCGGGGGGAGCTTGCTCCCGAGCCTCCTCATGCAGGTGAGGTTTTGTTCTTGTTCTTCTTTTTTATCTGATGAAATGCCTGATCTAGTTCTTGGAATGGCGGATCGTTCGCGGAAATATGCTCTCGTGATGTCGCGATTCGCGTTAGGGTTGAGGTTCGCGTGGAATTGATTGGATTAACTTAGTTTCGTTTAGAGTTGGTCGTCGGTTCTATGATTTGGGTTACCTTTTGGCTGCATTGCCCGGATACCGATCATGGTACTCATAGTCCTATACTCGTGTCAGGAGCATTCTTTATTGTCTTGGATATGAATGGCAGATTGCTTGATTCCAAACGTTGTACGGGTTTGTAATTTGTTTGACTCTGTATATGTTTTGTGTGAACCGTGAAGCTGCGCATGTTGTTCGAACGGAGACCAAGTTATGTTCTTTCTGTTCTGATGGCATGCTGATTTCCATTTCTTTCAAATGTCTTCAAGGTTCATGTGCATAATGGGAAATATTGTGATAGTTCACCCATAGATTTCTTCTGATCCCTAGTGACAGGCGTTGCCATGTACATATACTGTTAGCATTTTTGATTGCATAGTTTGCAATGAGTGATAAAATTATTGTTTGCTAGGGATATGGACCACAGTCCATTGAAGAGAAGCAGAGACTTTATATGCTGTTGAGAAGTTTGAATTTTAACGGAGAGACCGCACCTCCATCAATTTCTGAGCCCTATACGCCAACGGCTCAGAGCTTTGGCGGTGGTAATTCCCTAGAGGGGTTTTATTCACCTGAGCTTAGAGGTGAACTTGGAGCTGGCTTGCTGGATCTTCATGCTATGGATGACACCGAGCTACTTTCTGAGGTACACCTCAAATGCTACATTTTAAAAATGTTTTTCTTATTTTCTTACCATTTAACATCGATGAGATAACAGACAATGTATACATGAAGTCGTCGGTCATTATTCTATCAATATTGGGATGTTACTGTACGTACATACTTATGCTGCAAGCAATAGGATGAATTCACTTAAATGGTGGTTTATATGGATTCATGTGAAATATTTTTATCCGTGCAGTCCATTCCAAACTAACTGTTTTCCTTTTGGCAGGATGTAGCTTCAGAACCATTTGAGCCTTCACCCTTTATACCAAAGGAAATGGATGAGGATGATGATGACATGCTTCCAGGAAGCCAGCCAGGCCCATCAGACAACTATAATGCAGTGGCCAATGAAAAAGAGAGCACTGCCAGAGAAAATAATGTAGCAAAAATTAAAGTTGTGGTACGTTAAGCCATTTGAAGTGTTCCGTTGATAACCGGTTTTGACACAACAATGCTTGACAAATATATTTGACTTATTTTCACCCCATATTTTCAGGTAAGGAAGAGACCTTTGAACAGAAAGGAGGTATCTCGTAAGGAAGAAGACATCATAACTGTGCATGATTCATCATCTTTGACAGTTTATGAACCTAAGCTAAAGGTATGAACTGTCCATCCCAAGGGGATTTTGTGGGGCCAGTATTTTTAAGTTACTTTTTGCTGGTTTATGCAGCTATTGCAATCAATTTATTTAACTATTAAATGCCTACAATGTATTATGTGGTCAATATAGGAGGAACAATAGTTTCAGTCTACGATAATTTTACTTGATGTTCACTATACTAATGTATTCACTTTTTACTGACCATCGTATCTGCCCTCGTGTTAATAGTCTGGGATACTTCTAGCATTTTTTATGCTGACTGTTTCTATAGATGCTTACCATGTGTCATACTAGATAGGTGTGCAGATTTCCGGTGATATACATTTGTGGTACTGGGGATCTTCCTGTTCTTGAAATGGACATATTGGTCATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCATTCTAGGGTGCAAAGATCTATTGTAAATTTGTATTATGGTAGCTGGAATATAACATTCCTGGTACAGTCTCAAGAAAAGGGAAATTACCACATTCTAAACCTACCGCTCTAACAAAAGTTCTTCAGAAGTATTGTGGTTAACTGAAGTTATGCTATATTTCCATTTTATTAGCTATGCATGATTATTTTTTGGACAAAAGTAGCATTTAATACATTTGCCAGAACCGCTAGACCTCTAGAGGATCAATACTAGTACATACATTTTCAAGAATTTAAGTTTTCCTCATGAGTAGTCCTGCAATTCTTCCTGTTACTATGTTAACATCTTGTATCCATTGAAAGGTGGACTTGACAGCTTATGTGGAAAAGCATGAATTTTGTTTTGACGCTGTCCTGGATGAGCAAGTTTCGAATGATGAGGTATTACTATTTTCTCATGTTGACCAAATCATACTTATTTGTTTTGAAAAATTGTTATGGGACACCAAAACTACGTCACAAGCAACGTTTTGGACATTGACATTTCTTCTGTGATGTAACCTAGTGAAATTATAATACCTTGTTGAGACAACTCTACACACATCATTTTCATGTCAGCATTGTAGTTCAAATTGTATCTCAGCATTGTATCTGTTTGGTGTCTAGGCAAATGGTACAGCTTTGTTGCCAGTTGTCACCAAGCGGTTTTCATCCGCTAACAGGTCCATGTGCTCAAATTGCCCGCTTACAAATATCCTTACCATCGTTTTTATTTGTGTACTTTCCCCACCTCTACTACTGTTGTATAATGTATCACCACCTTGGCAGCTGCTCTCCTTTGTTCTCTCTCTCTCTCTCTTTTTTTGGGGGGGTATCAGTTGTGGGTGGCAGTTTTTTTAGGTGTTCCACATTTTGTCCATCTATCCAGCCTTGATATGGCAATGGACTTGTGCTAGATTTGGGAGTACTAGTTTGAGCTACATAGTATTTGGATCACAAGGAAAATCATTTTGTTGTCCTTGTTGGTGTATCATGGATTTTCTCTATAACAGCGAAGGGATTGTTCTTGATTATTTCAGCATTTGACTTTTGGGTCTCTCTGGACAGGTATACCGCGAGACTGTGGAGCCCATTATACCAATAATATTCCAAAGAACAAAAGCAACATGTTTTGCTTATGGTCAAACAGGTTAGGCTGCAATGCTGATATAAAGTGGGTTTTTATATGTTGCGTTTTTCAATCACAAACATATAATAGTAATCTGGGCTCACTTCCTTAGTGTGTAAAGTATTGCCTGATAAATGATAATAGTATGGTTCTTTTGGACAATTTTTGGCAAATGATTAGCCTAATGCCTCAATATGATTGTGCTGAAGTTGATCTTTCGCGCAAAATAAGTGTTGTTTGAGCTCTTAAAGTTTAGGCTGCAGAAAACACTGGGAAACTGCTTTTACTGTCTACTAATTTCCCTTCGTTGACTTATAGATTATAGCTCTTGTGGTAAATTTGGAAAAGAAAATCTAATTCTTTTATTCTTTCTCAAAGTTTACCTTTTTAGATCTTTTACTAGTTTTGTTGTACTTTTTTCATTCATGAGCAGGTAGTGGCAAGACATATACGATGCAACCTTTGCCTCTGAGAGCTGCACAAGACATGGTTCGCCTTTTGCATCAGCCTGTCTACCGTAATCAAAATTTTAAGCTGTGGCTTAGCTACTTTGAGATATATGGTGGGAAGCTCTTTGATCTTCTCTCTGATAGAAGGTTGGTCATTGCATTTCTTTTCTGTCCATGCCTTCAATTGGTATATCTGTTTCCTTCTGATTTTTAAACTTGATGCATCTTGCATATACGTACCTGCACTTGTCTGTGTGCTCATCTTGCATTTATTACAGTATATGTGTTTTCTTCTGGGTGCAAGTCCCTTTTGTTTGTCATAATTTTTTTGAACATCATGTAGGGATCTGCTAAAATGTTACATGATGCTATGTTGCATAGGATTCTATGAGCCAAGAGTTAGCCAAACACCATTTAATCTTTAGTTCCCTTTGATGCATTACACTGATAATACCTTTTAATTTGAGAATTGTACTTCTGAATTGCATTTTGTTTTGAAGTGTCTTTTGACTTGGAATTTTCAAATTATATACTCAACTGAATTTTGTCAACTCTTGTTTTACAGACAGCTCCTGATGAGGGAAGATGGCAAGAAACAAGTTTGCATTGTTGGTCTGCAAGAATTTGAGGTTTCTGATGTTCAGATTGTCAAGGAATATATTGAGAGAGGAAATGCAGCCCGGAGTACAGGGTCAACGGGGGCCAATGAAGAATCATCAAGGTCACATGCTATTCTGCAGTTGGCTATCAAGAAACATATCATAGTAACTGATACCAGGCGACAAAGAGATCGAGATGCTAATGAATCTAAAAACACAAAGGCTGTGGGAAAAATTTCATTTATTGATCTTGCTGGAAGCGAGCGTGGAGCCGATACAACAGACAATGATAGGCAGACGAGGTGATAATTTTTTATCTTACTTTTCCTTGTTGCCTGTATTTTCTAACTATTGACCTGCAACTTTTGTTTTCTCAGAATTGAAGGAGCTGAGATAAACAAGAGCCTGCTCGCTCTGAAGGAATGCATTCGGGCCCTTGATAACGATCAGATACACATTCCTTTCAGAGGAAGCAAGCTTACAGAAGTTCTTCGTGATTCATTTGTTGGTAACTCTAGGACGGTGATGATCTCTTGCATTTCTCCAAATGCAGGTTCATGTGAACACACATTAAATACCTTGAGATATGCTGACAGGTAATAATTCAAAGCGTACTTTACAGTCTCCAATTCATGTACAGGTTTCAGTTACTTAATGTCCATTAACTTACAAAATTACTGACCAACTAACAGGGTTAAAAGTCTCTCAAAGGGCAGCAATACAAGAAAAGAGCAGCCCACTGGGCCAACTATACCTTCCAGCAAGGATTCTTCATCTGCCCCTTCATATCCTATGCCCATCGAAACTGAGGAAATTGCCAACCAGATTCAAGAGAAGAGACCTGTTGAAACTTCTAGGAAGGCTGCTGAAAATTTCACCTCGAACTCTTCTATGGAACCTGACAGGAATCCTGTTAGTATGATTCCAAGTTATTCTAATAGAGGAAAAGAAGAAAATGGTTCATCTGGCTTGAATGACAGAGAACGGGTTGATCTGAATTCCAGTCGAATTAGCTACAACAGTAAACCACAGTCTGTTCAGAGTTCAGCAAATTTACAAGAAGAGGAAAAGGTTACAAAAGTTTCTCCTCCTCGGAGAAAGGCCTATAGGGATGACAAACCTGAAAGGCAGAGCAACTATGCGAAGAAGGATAGTGGACCTGAGACAAGTAGGCCTGGGTATAAGGTGCAGCAGGCAAAGCAGTTGCAACAGCAACAACGGCCGACATCTGCTTCAGCTTCTCAGAATTCATCAAGGCAATCTGAAAAGGAAAGTTCTTGTGATGATGTGGAAATAGATGCTATTCTTGAGGTAAAGGAATAATCTGCAAGTACTGTTATGTTATAATCCTGAATGGAGTTATACATCAAATTTTCTTTTATATGTTAGGAAGAGGAGGCTCTCATAGCAGCACACAGGAAGGAAATCGAGAACACTATGGAGATTGTACGAGAAGTAAGTTATTGATGTACTGTGCTTCCTCAGGGTGAACGGCATCATCATATATATTGCACTTGTAGCTCCAATGTTCTTAACTAGAATCTTTCCAGACATTGAGAAGTCCCCTCCCCTGTTATAACATGTGTTGGCCAGTAAAAACCTACTAAGCCGAGCTCAAAGAATCTAAGCAGCCATGTTGGTTACATCTCAATTCATTAGGCCTAAAATATTTATTTAAGCGCTGTAGGCAGGCTATAACTGCTTTCGAATCTGAGTTGCATATCATGTAATATTAACCTGCTTATAAGTTACAACTTGTGAAGCTAGTAGTGTTGAATTCTTTGGTTTGATCTGAAGTTGAATGTAGAACTAGTTCAGTCTTGTGCACAACTTGAATCTAAGTAGGTGATTCAAGTGCATTGCACACGATTTCTATCTTTGTTGTGTACGTGTTTCGGCTTATGAAATATGGCATCCCTTGATTATATCATGCATCTGAACCAAGTGCATCTTTACTTTTCAATTTCAGGAGATGAACCTTTTGGCAGAAGTTGACCAGCCAGGGAGCCTTATTGACAACTATGTAACACAACTGAGTTTTCTTCTGTCACGCAAGGCTGCTGGCTTGGTCAGCCTCCAAGCACGCCTGGCGCGGTTTCAGCATCGCCTCAAAGAGCAGGAGATACTCAGCCGTAAGAAATCTTCCAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019208

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019208&oldid=47964"