BGIOSGA019222

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Revision as of 02:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019222| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019222, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA019222

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019222, complete gene.

LocusTag

OSJNBA0017J22.2

Ensembl Transcript ID

BGIOSGA019222-TA

Ensembl Protein ID

BGIOSGA019222-PA

Length

4291

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3614005..3618295

Sequence Coding Region

3614005..3614347,3614444..3614581,3614889..3615013,3615588..3615857,3615937..3616067
,3616817..3617024,3617113..3617178,3617268..3617345,3618239..3618295

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3614005..3618295 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3614005..3618295 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCACGGTCGAAATCAACGCCGGATTCCGATCTCCGCTCGCACGACGGCATTCCCAATCCCGGATCGTGGTCGGGGAGGTTGACTCGCTCCCGAGCAAAGCAGATTGGACTGGTTCTTCCGATTCAGGCGGTGGAATCGCCGGGAATCTCTTCCAACAACAACAAGAAGAGAAGGATCGAGGAGGAGACGGCGGGGGAGTCGCCGGCGACAGTGATTCCGACGACGACGACGACGGGGGAGCCTGGTACCTTGGCACGCCGGCCGATCCACCCGCCGCAGCCGCACTCCACCGCACCGCGCATCGGCAGAGAAAGCTCCTGGATCGCCCAGCGCAAAGTTGATCGACTTCGGAAGGCAACTCTCCGGGATGCGGAAGACGAGCCCTCCACCGCGGCCGCCATGCCCACCCCCTCTGACAAGAAGATGGTGTTGGGCATGTCTCGCTCAATCGTCCGTGTTTCATCTCCACCGACTGAGGGAAAATTTATCTCTCCGCTCACCGGCACCGTCATCAGTTGGGATGGAGCCACCAAGCGTGCTATGATCCTCACGATCTACTCCACTGACTTCAAGAGTAAGCCGCATGAGCCCCAACCCGAGCTATGGGTTCATCTCCCAGATAAGTCTATCGTGCAGGGACGGTTGATATTCGTGAATCGCCACTACAGTCTTGCCATCTTGGAGATCACGTCTGACCTACCATTGCAGGTCCCCACTTTTGGGTCAGCAGCAAAGTATGGCCAAGAAATTCTTGCCTTGTCTCGGGATGAAAATATGTCCCTGGTGGCGAGGCGTGGAGCAATCACCTGGTCGGATGGTTCTTTGATGTGGAGAAACCATTACATGTTTCTGGATTGTGATGTTCCTGAGGGTGGTGAAGGAGGGCCTGTGGTTGACTACTGTGGTAGTATCATTGCTGTAGTATACAGAGACGGCCCTTGTGCAGCAATCATTTCAATCTCAATTATTCATGCCTTGTATGAGATGTGGGAGCAATTTAGCTGTGTTGCCCGCCCTGTGTTTGACATGGATTTAAAAAGTGTGGAACTAGCTAGTTTCTCACTCCGGGAGGAGCTCTCTCTGAAACATAACATCGAAGGTGGCTTTATTGTTGAACACATAGCCAATGATTCTGCTCTTGAAAATCTCGGTGTTAGACGGGGTGACGTGATCTTTTTTGAGGATAAGTGCGGGACTATGTTGCCTGAGATAGAAGATTATCTCCTTCATCTTGGTCGGAGATACCTGGGTGAGAAGAAGTCGATGGTTCTCAAGTTGGAAGTACATGACATTGAAGGTACATGCAAGGAGACAATTACCTTACCCTTAGAATTTAAAGTCAGCTCAGGAAAGCCAAACTCTCAGCCCTGCTTTGATGAGCTTGGAATATGTAGGTACGATGGAAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MSARSKSTPDSDLRSHDGIPNPGSWSGRLTRSRAKQIGLVLPIQAVESPGISSNNNKKRRIEEETAGESPATVIPTTTTTGEPGTLARRPIHPPQPHSTAPRIGRESSWIAQRKVDRLRKATLRDAEDEPSTAAAMPTPSDKKMVLGMSRSIVRVSSPPTEGKFISPLTGTVISWDGATKRAMILTIYSTDFKSKPHEPQPELWVHLPDKSIVQGRLIFVNRHYSLAILEITSDLPLQVPTFGSAAKYGQEILALSRDENMSLVARRGAITWSDGSLMWRNHYMFLDCDVPEGGEGGPVVDYCGSIIAVVYRDGPCAAIISISIIHALYEMWEQFSCVARPVFDMDLKSVELASFSLREELSLKHNIEGGFIVEHIANDSALENLGVRRGDVIFFEDKCGTMLPEIEDYLLHLGRRYLGEKKSMVLKLEVHDIEGTCKETITLPLEFKVSSGKPNSQPCFDELGICRYDGK</aaseq>

Gene Sequence

<dnaseqindica>1..343#440..577#885..1009#1584..1853#1933..2063#2813..3020#3109..3174#3264..3341#4235..4291#ATGTCGGCACGGTCGAAATCAACGCCGGATTCCGATCTCCGCTCGCACGACGGCATTCCCAATCCCGGATCGTGGTCGGGGAGGTTGACTCGCTCCCGAGCAAAGCAGATTGGACTGGTTCTTCCGATTCAGGCGGTGGAATCGCCGGGAATCTCTTCCAACAACAACAAGAAGAGAAGGATCGAGGAGGAGACGGCGGGGGAGTCGCCGGCGACAGTGATTCCGACGACGACGACGACGGGGGAGCCTGGTACCTTGGCACGCCGGCCGATCCACCCGCCGCAGCCGCACTCCACCGCACCGCGCATCGGCAGAGAAAGCTCCTGGATCGCCCAGCGCAAAGGTTTTCTTGAGCTTTCGATCCATCCATCCCCACCACTGTTTCTTCCCCAATTTTTTAGAGTACCTATATTTTTTTTCTCTTCTTCATCTTCTTCAGTTGATCGACTTCGGAAGGCAACTCTCCGGGATGCGGAAGACGAGCCCTCCACCGCGGCCGCCATGCCCACCCCCTCTGACAAGAAGATGGTGTTGGGCATGTCTCGCTCAATCGTCCGTGTTTCATCTCCACCGACTGGTAATTAACATCTACTTCTAATTCAACTGAGTCAACCCACTTTACTGTCTGATAGATTGATCGATCTACTTATGCAGTCAAAATCAGAAAATTATTGCTGCTCTCTACTCCCATGGTAACCATGGATGTAGTGCTAATCTAGTCATCGATCAAACTTAATTAGCTGTAGGCGAGATAGACAATGTCTAGTTCGAATTGCAACGAAAGGGAAAATATGTATTTAGTAGTAGCCCGATACAAAATATGAATTTATATCAACTTCTAGCTATGTATGTAGCTACCTGCTAATCAACCGGATGTTTTTCAGAGGGAAAATTTATCTCTCCGCTCACCGGCACCGTCATCAGTTGGGATGGAGCCACCAAGCGTGCTATGATCCTCACGATCTACTCCACTGACTTCAAGAGTAAGCCGCATGAGCCCCAACCCGAGGTGCAGGCTTCTTTTCCTGCAGCTTCTGTATATATATACTGTGGCTTCTATATGTGTGTAATCTGTTATTATTAACCATCATGTTCAATTCAGTTTCTATAAATGACTCTTACAATGCCTGTATATTTCTTTAAATTTCTTGGGGCAAGTGCAGGACACCGATTTCCATTAGCTAATCCCCATGTTTCTATCATCCGAGTTCCATTATTGTTCTTGTTAAGTAGGGGCAAACCCAATTGCTAAAAATGACTCTTCATGCCTGCCAGTTTCTTTAATTTCTTGGTCCAAGTGTAGAACACCGATTTCCATTAGCTAATCCCCATGTTTCTATCATCCGAGTTCCATTGCCATTTTTATTAAGTATGGTCAAGTAATTGCTAACGGTAGCTGGGCTGCCGTGCATTTGCTTTGTGCGAACTTTACTCAGCCCTCTGATTTCAATTCTCAAACATTTTCATTGTCAGGCCTTTTCTTGTATATCCTTAGTATTAATTATGTTTCTTGTGCTTAAAATGAGTAACAATATGGCATTAACCTTTTTTTTCTCCCATTGCCTGCTCTCTCTATCTTTCAGCTATGGGTTCATCTCCCAGATAAGTCTATCGTGCAGGGACGGTTGATATTCGTGAATCGCCACTACAGTCTTGCCATCTTGGAGATCACGTCTGACCTACCATTGCAGGTCCCCACTTTTGGGTCAGCAGCAAAGTATGGCCAAGAAATTCTTGCCTTGTCTCGGGATGAAAATATGTCCCTGGTGGCGAGGCGTGGAGCAATCACCTGGTCGGATGGTTCTTTGATGTGGAGAAACCATTACATGTTTCTGGATTGTGATGTTCCTGAGGTAAATACCTTTTCTTCACACTTGCTATTTATTTTACCTTCTACTTAGTGGTATTTATTTATTTTTTTAATTAATGCAGGGTGGTGAAGGAGGGCCTGTGGTTGACTACTGTGGTAGTATCATTGCTGTAGTATACAGAGACGGCCCTTGTGCAGCAATCATTTCAATCTCAATTATTCATGCCTTGTATGAGATGTGGGAGCAATTTAGGTATATACTCTTTCTCCATCAGTATTAAATTTCTTTATTCCATCAGTACTAAAATGTACCGCCGTTTGAATCAAAATCGAAGAAACTAACTTCATTACGATAATATTGTATGTTTAAATGCCAAAAGAAAAATGGAAGCAAGGATTATGTTGCAACCATTGAAAAATATTTGGATAAAACCACTACACTACATACGGGTATAGTAGTAGCCTGTATGAAGAAAACAATAAACAGGGAACTAGATGAGCAGTGTAAGTAGTAGCATGTAATTTCACTACAAAATGATGGATAGAAATTGGCAATCTAAGACATTTTTTTTAGGATATGTATTTCCTCCTAATACAGATTATGTTATGTACATGTGAAATTATCTATATTATGGAAATGGCACTAACTTTTTAGATGTCATTTTCCCATAATATCGTCTTGAGCAATTTCTCAAAGTTAAAAAGTTTATCTAGCACGTAAACCCACTAATCACGATATATTCTTATTAGTTTTATGGATAAATCTTTTATATCTATGTTATTAGCGGTTCGAAAAAGCAAATGCTGGAAAGTAATCCATGATTAAAAAATACCTAAAATCAATTAAAATTAAGTCTTAAAATTCAATTTGCTAAATAATATACAAGGGCTATAAAGTGGTCGGCGCACCAACATGCGCACTCATTTTCTACTAATAGAGTAAATCCATCTTATCACTAGCACTCATTTTCTTCTAATAGACTAAATCCATCTTATTTGTAGCTGTGTTGCCCGCCCTGTGTTTGACATGGATTTAAAAAGTGTGGAACTAGCTAGTTTCTCACTCCGGGAGGAGCTCTCTCTGAAACATAACATCGAAGGTGGCTTTATTGTTGAACACATAGCCAATGATTCTGCTCTTGAAAATCTCGGTGTTAGACGGGGTGACGTGATCTTTTTTGAGGATAAGTGCGGGACTATGTTGCCTGAGGTGAAATGAGTTCTTGTCTCAAGTAATCAATATTATGCAAGAATAATACAAATGTGTTGTGATTTCTATTTTTAAAATTCGTGAACAGATAGAAGATTATCTCCTTCATCTTGGTCGGAGATACCTGGGTGAGAAGAAGTCGATGGTTCTCAAGGTCTGATATTATATAATAACAAAAAATATTACTTATTTATTTTACAAAATTGGGGAAAAATAATTAGCAAAATTACTTTTCTTGTGTAGTTGGAAGTACATGACATTGAAGGTACATGCAAGGAGACAATTACCTTACCCTTAGAATTTAAAGTCAGCTCAGGAAAGGTAAACTTCTCTAAACTATTGTACAATTGTTCTACTTTGCTTGTTTTAATACCTAGATTTTACCCCTTAAGCAGCGATAAATGTGTTGAATTTTAGGTTGCCTGACGGAGGATGGCTTGAAGATGTACAGCAAGACTGAAGTTACCTGGAGAGGATAATTTAGTGAATGTTATGTAATTCGAGTGTTCTTTGACTTGATGACTTCTGTCGGGGCGTTTAACCTAGGATGTTACCTAATTTTGGCTGAACTGCTAATATTCATATGAACGACTGTCATATATATTCAGCCCGATTGGTCCTTTTTGAACGAAGTTTGGTGTTCATGTCCCCGTGTTCTTGCCTGTATCTCTTGCCACCTATACAATGTTGCCTAGTAGTATATCTCATGCCATCTACTCCATTGTTTTCCACGTGCATGCTTTTCAAACCGCTAAACGTTGTGTTTTTTGCACAAAAAAAAATCTGTAGGAAAGCTGTTTATAACAAATGCGTAATTACTTGCTCTGTTTTGCGTGTGTGGGGGAGAAGATCGCAACCGTTCCAGAAGAAAGCAGCCTATAAACTTGGTAACTTGCCCCTCTTGACTGTCACCATTGCAATGTTTTGCTGCATGTTTCAGCATGAATACTAATAGTCAATTCATTGATGTTCATTTCAGCTGCTTTGATGAACAGAGACTGATTCAAGTAAATTGTATGTTATTGTTAGATATTTTGGATTATATATGCATATTGCCAATATATTTGAACAGTTAACTGTAAGATTTCAGAGAAGCTGTACAGAAACTGTACTGTGCAGGATAATGGGGAAGATTTGAGGTGCATGATAAAAAAAAAACTGAAAAATGACTTCAATTGACTGATCTAAGATTAAGATGATGTAAACCTATATAGCCAAACTCTCAGCCCTGCTTTGATGAGCTTGGAATATGTAGGTACGATGGAAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019222