BGIOSGA019230

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Revision as of 02:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019230| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019230, complete gene.| tag = OsI_185...")
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Gene Name

BGIOSGA019230

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019230, complete gene.

LocusTag

OsI_18558

Ensembl Transcript ID

BGIOSGA019230-TA

Ensembl Protein ID

BGIOSGA019230-PA

Length

5319

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3733880..3739198

Sequence Coding Region

3733880..3734267,3734374..3734523,3734690..3734747,3736796..3737045,3737127..3737257
,3737939..3737987,3738489..3738629,3738696..3738788,3738868..3738942
,3739020..3739097,3739181..3739198

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3733880..3739198 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3733880..3739198 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCCGAAACGGGGCGGTACCATGAAGACGACGGCGGCGGCGGCGGCGGGAGCCACGGGCACAGCGGGAGCCTCTCCAGTCGGCGGCGGTCCAGCGGGAGATGCAAGTGCTGCTGCGGGGAGGAGGGTTACCCGCCTTCGATCGAGGGAGCTAGGGCTGGAGGCGACGACGGGCGCTGGGGAGGATGTCGCGTCGGATGATCCGGGGCCGGCTCGGAAGAAGGGGAAGGTCCAGCCGGCGACGAAGGGAGCCAAGGGTAAGGCCGCACGAGCGGATCCCCCTACCCCGCCGCCGCGTCCTAGATTGCCGCCGTACCCCAAATCCGGCGATCCCATGGATATTCTCAAGTGGGATACAGAGTTCAGGAGGATCTGCGCTCTTCCAGAACCTGCAGGTACTGTCATCCCTTGCACTGTCAGGAGGAAGCCTACGGGCCCTCGCACCGTCAGCGTCACGGACATCGCAAGCGTAGCAGACAATAGCATGATCCGGAAGGCTTCTCGTTCCGTCGTCGGCATTTCCTCCAGGATACCTGATGGGAAGGAGATTATGCAATGCAGTGGTATCGTGGTCGATTGGAACAAGACCAGCAGGTCTACCGCAGAAGGACAATTGCTTTTCTTCAATGCACACTACCGTATTGCATTGCTGGAGGCCTTGGTGGACTCTCCATTGGAGCCTGCTAATTTTGGCTCTAGTCCAAAATTTGGACAAAAGGTGTTTGCCTTGGCAAGGGACAGGAAGTCATCCTTCTTTGCTAGGTCTGGGACAGTCCTGTTGCAGGATCCACCATTTTTTTTGAAGTACAAATACTGGTTATCTCTCAGCTCTGCAATTGAACTGTGTGGCACTGGAGGACCTGCGATTGATGAGCGTGGTGATGTTGCAGGGATGACATTCGGTCGTTTGCCAAATCCAGATCTCCTCTCTATCTCTATCCTGCAGACATGCATTGACATGTGGAGGAGATTCAGAGAGAAGATAGAAGATATCAGTATGATAGAGAGATTGAGAGAAAAAAAATTAGTGAATTTGGCTTATTTCAGTCGTGTTGCTCGCCCATTTCTTGATATGGACTTGATAGCCTTTGAGACGTTGGATATTTCACACCAGGAGGAGATTGAATCGGAGCATGGCATTACCGATGGTTTCATCGTGGACTTGGTGCGCCATGATTCCACTGCTGGGAGAGTTGGTATTTCCAGGGGTGATGTCATTGTTTCATACAATGGACTTCGTGACTTCACTCTGCATACGTTCGAGGAGTACCTTCTCAATCTTGGCTGGGGTTTTCTTGAGAGTACTGATCCGAGCTGGACGATCAATTTAGAGCTTGAGATATATGATCCTGTTAGACGTACTATCAGAGGTGTTACCTTCCCTCTGGGATTTTCTGATATTTGCGAGGATGTCCTTGTACTGCCATGA</cdnaseq>

Protein Sequence

<aaseq>MPPKRGGTMKTTAAAAAGATGTAGASPVGGGPAGDASAAAGRRVTRLRSRELGLEATTGAGEDVASDDPGPARKKGKVQPATKGAKGKAARADPPTPPPRPRLPPYPKSGDPMDILKWDTEFRRICALPEPAGTVIPCTVRRKPTGPRTVSVTDIASVADNSMIRKASRSVVGISSRIPDGKEIMQCSGIVVDWNKTSRSTAEGQLLFFNAHYRIALLEALVDSPLEPANFGSSPKFGQKVFALARDRKSSFFARSGTVLLQDPPFFLKYKYWLSLSSAIELCGTGGPAIDERGDVAGMTFGRLPNPDLLSISILQTCIDMWRRFREKIEDISMIERLREKKLVNLAYFSRVARPFLDMDLIAFETLDISHQEEIESEHGITDGFIVDLVRHDSTAGRVGISRGDVIVSYNGLRDFTLHTFEEYLLNLGWGFLESTDPSWTINLELEIYDPVRRTIRGVTFPLGFSDICEDVLVLP</aaseq>

Gene Sequence

<dnaseqindica>1..388#495..644#811..868#2917..3166#3248..3378#4060..4108#4610..4750#4817..4909#4989..5063#5141..5218#5302..5319#ATGCCGCCGAAACGGGGCGGTACCATGAAGACGACGGCGGCGGCGGCGGCGGGAGCCACGGGCACAGCGGGAGCCTCTCCAGTCGGCGGCGGTCCAGCGGGAGATGCAAGTGCTGCTGCGGGGAGGAGGGTTACCCGCCTTCGATCGAGGGAGCTAGGGCTGGAGGCGACGACGGGCGCTGGGGAGGATGTCGCGTCGGATGATCCGGGGCCGGCTCGGAAGAAGGGGAAGGTCCAGCCGGCGACGAAGGGAGCCAAGGGTAAGGCCGCACGAGCGGATCCCCCTACCCCGCCGCCGCGTCCTAGATTGCCGCCGTACCCCAAATCCGGCGATCCCATGGATATTCTCAAGTGGGATACAGAGTTCAGGAGGATCTGCGCTCTTCCAGGTTAATTTATGCTTAATTAATTACTACTTTTCTCTTTAGCCGATGTCACTAGGAAGAAGGAAAACAACTGAAATTTTTTGTTCTGTTTGTTGCGCGATTTCTTCAGAACCTGCAGGTACTGTCATCCCTTGCACTGTCAGGAGGAAGCCTACGGGCCCTCGCACCGTCAGCGTCACGGACATCGCAAGCGTAGCAGACAATAGCATGATCCGGAAGGCTTCTCGTTCCGTCGTCGGCATTTCCTCCAGGATACCTGGTAAAAAGATTGCTGTTAACGATCAATTTCAATTACAATCCCCTCCAATTAACAGCTGCTTCTTTTTTTTTTTAAGATAAAGGAAGCTTTTATTCAGATCAAGATAACTACATTTCTTACCAGCTGCTAATTCTGCCTATGTTGCTATTTCTTCCTATGTTTTCAGATGGGAAGGAGATTATGCAATGCAGTGGTATCGTGGTCGATTGGAACAAGACCAGCAGGTTGGCGACAATCGTAACTTGCTCTGCAGCCGTGTGCTTTGATGGTGCACTAGTCCATCCCAACCCCAAATCTTAATAATATTTGGTCAGCCTCTTCCAAGACCATGAAAATTAATTAACATAGGGTAGATATGTTTGCACAATAGCACTCCAGAATTAACCCTTGTTCTTTAGATAGCTACGGGTCCTACATAAACTAGTTGACACCCTGCGTGTTGCGGTGGGCACACTATAAAATTTTCAAAGTGCATAAAATTGATGCAAATTTTGGTCATCGAATCAGCATATGAAAAAAATAAAGATTTACAGTGTTGAGATAGAATTCGTGCCTAAATGTCCGTTTTTCAATTAGGAAAGCAACCCCAATTCTCATGGTTCCTGACATTCTAGCAATACCAGGCTGGTCGATTTGCTGGATGGCTGCGAAGATATGTTAGGTATAAAATCAGGATTAGTCTCATGGCAATATGATTAATTGAAAAGTTCAAAAGTTTATAGAACATATAAAAAGTTATCTCACCTTCAGCAGCTATCCCAAACGAACCTTAATGGCTGCCTTCATCTGGATAATCTAGGCTACATGCAGGCCTTATTTATAGCAACTCCAATCTGTATTACAAGAAATCAATATATGTTGAAACTGAATTCATACTGAAATTTGTGTTTTGAGGTCGGTAGAGATAATTGGCATTTGAAGATGAATATAAAAACTGTACAATAGGAAAGCTAAGGCCAATACTGCTTCTTTACTGAAACAAATCTACAGCAAGCAATGAAAGAGAGGGAGTGTTTAGTTTTGTTTACCACTTCATTAAGGAATGACATATACCAATTCGATGAATTGTTGCAAATCCTATTGGACAGAAACCTGCGAAAATAGGTAGAAACCAATTGATTAACTATTAGTCCTTGTCATATATCAGGATGAAGAAAAATCTAGCAAAATCAACCACCTGATGGGAACATGTACGAAGCAAAATGAAAACTTAGATGTTGTTAGAGATAAAGAAAACTATTTACGGTGGAGGAATAAAAAACAACAGCTGAGCGTGGCCTGCAATTGATAAGTTGGTGAGCCTTAAAGAATAATTTAGAAAATGTTTTTAGTTAGGAATGTAAATTTAGAGCTTTGTGCAGTACATACAATCAATGTAAACACTCATCCACAGCAATTATTAGTTGAACAAAAGATGGTACTGGGGTTACAGGGCCATGAAGTCACTATTGCTTGCAGTCCTGTGGTAGGTCATCAGAAATCACATACATGACGATTGTTAATTGACAAACTCCAAAACTGTGCAAAATAGGATAGGAAACAGAATGTGGTCGAGCAGGAGATTTTCCGGAAGCACAAAGTAGTGGTAATAAGATAGTAAAACGGCATACCAAGCTTTCCAGCAATTCTTATTTCCAAAATGTTCAACATATAAGTTGAGACAAACATATGTAAATATGTAAGGAAAAAAATATCTATTTGATCACAGCAAATTGTAGGCAGGTAGTAGTAATATAAGGTGGAAATAGCTAGTACATAGTAGCAATATAAGGATCGGTTGGTGAGGGTTAGGAGCGTGCATTTTTTCCCCCACAAGGACCGCTGTGGGTATGGAGCGTGGGCGAGGTGGGCTGGGCCAATGGAAAACATTGATGGGGAGCTGCCCCAGTGAGTAAGCTGGCCCAAGATATCAATACCGTTGATCTGGAACCATGAAGACCAATCCAAATGTCGAGAATTAACGATGACGTGGTGCAACGTATTGCAAGCTTTATAGTATTAATTGCTATGGTGGGTACTAACTATATAGGAAGAAGGGATGGCTAGCATATTATGACTCGAAATTAAGAGTATATTTGCATAGGAAGCATGAGAGGGGATAGTACATATGTTTATTCCGTGTTTTTATTATCTTTTTCTGAATTGTTTAATTTTGTCTTTTCATTCTTATTGTTTCAACTGTGCTATTCCTGTTCATAATCTTTATTGGATCACACGATTCAAAACCATGTGATCATCTCTTTTTGCAGTTGCTCGTACATTTGCCTAATAGGTCTACCGCAGAAGGACAATTGCTTTTCTTCAATGCACACTACCGTATTGCATTGCTGGAGGCCTTGGTGGACTCTCCATTGGAGCCTGCTAATTTTGGCTCTAGTCCAAAATTTGGACAAAAGGTGTTTGCCTTGGCAAGGGACAGGAAGTCATCCTTCTTTGCTAGGTCTGGGACAGTCCTGTTGCAGGATCCACCATTTTTTTTGAAGTACAAATACTGGTTATCTCTCAGCTCTGCAATTGAACTGGTATAAGGATCGTTGTTGTTGCAGTTTTTTATCCATTCCCACTTTCTTGCCTATTTAGTTTGTGTTATTTCTTTGATGCAGTGTGGCACTGGAGGACCTGCGATTGATGAGCGTGGTGATGTTGCAGGGATGACATTCGGTCGTTTGCCAAATCCAGATCTCCTCTCTATCTCTATCCTGCAGACATGCATTGACATGTGGAGGAGATTCAGGTTCATTAACAATCTCTTGTATTGTTGTATTGTTTCTACTATTCTTTTGATGTCTATAAAATTGTGGCATGTTGGGTAGGTTAACTTCAAAATTTAGATAATATTTAGATATATGTTTATGTTGGTATTGAAAACAGATAATATTGCAATCCTAACATGAGTGTTTAGTCAGCGGCGAAGCCATAGCCCCCCGCCCCCCGCGTTAGCAGTGGCACATGTCAATCTAAGGATTTAACGGATATTACTAGCCACATGTAATATTATTTTACGATAAAATATCTTTCTTAAACTGAGATCTTCTTTCTGTAGCAGTGACGGCGTCATCACTCTCTCGCCAAAACTCTGACCATGTCATACGATGAATCTCTAGAGAAATCTTGGCACCCCAACCTTCAAATCGTGGCTTTACCTCTGTGTACAGTGGCGGACCCAGGATCGAAATCCTGGGTGTGCCCACATCGACCTCAAGTGCAAAAATCAAAGTCCGGTGCTCATAAATACCATGTGATCTCAAGAGCAAAAAGTCAAAAGTTTTAGTGCACATAAACTCCCTATTTTCCTTCGCATATAGTTGATTGGTTCAACTTGATCTCTCCCTACAAATAATAGAAAACACAACTTCAATTTGAACTCTCACTAATTTTAGTTTTTAATTTTTCAATCAATCTTTGTCACCTCCAGAGAGAAGATAGAAGATATCAGTATGATAGAGAGATTGAGAGAAAAAAAAGTAAGAATGTAAACTAGGACGGCTGGACAGGGAAGTCCTGGCCACTTCGCTGGTCACTATGAGCCTGCGACTTCTGCCAACTTCCCATGTAGGCTCTTGGGCTTTGATTTCTGCCAGCTTGTTTGAGGCAATGAAGCAACCATCCTTTGTATAGGTCCACTATGCATACTACTAGCTATTTTTTTCCCCAAAAATTGTGGGTATACCGGTGTCTCCACCCCTGCCTGTGTACAATTTCACTGTCCTATATGCATAGAAATATTCAATGGCTGACGCTTTAAGATTAGCTACTTATGTTTAAACTTTGGTTGTTATACTTGGTATACTTTGTAAGAAATTCCACAAATTCTTGATGGACACATAGGTGTGGCATATAATATTAGCGAATTGTCTTTGTCTTTAATAGTCTGTGTAGCTCTCTTGTATATCTTGCAGTGTAGTTTATGTGTGCTTATCAAATATTTTAATATCTTCAAAATAATTCCTTGTCAAAATTTGAAGTTAGTGAATTTGGCTTATTTCAGTCGTGTTGCTCGCCCATTTCTTGATATGGACTTGATAGCCTTTGAGACGTTGGATATTTCACACCAGGAGGAGATTGAATCGGAGCATGGCATTACCGATGGTTTCATCGTGGACTTGGTATAGATATATTTGTTTTACTTCAGTTCTCAGAAATATATTTTTAAATTATTTTGAACTTTTTAGGTGCGCCATGATTCCACTGCTGGGAGAGTTGGTATTTCCAGGGGTGATGTCATTGTTTCATACAATGGACTTCGTGACTTCACTCTGCATACGGTAGAAAGTTTATGATTGTTTTCTTAGTTTTGAAAGGTGCAAAACAGTATTGCTTATATGGTGAAATTTTTATAAGCAGTTCGAGGAGTACCTTCTCAATCTTGGCTGGGGTTTTCTTGAGAGTACTGATCCGAGCTGGACGATCAATTTAGAGGTATATTTCATAATCTTCTTGGTGTTGAGAATATTGAAACTAACAACTGAAAATATAATATATTTTTTTGCTTGTAGCTTGAGATATATGATCCTGTTAGACGTACTATCAGAGGTGTTACCTTCCCTCTGGGATTTTCTGATATTTGCGAGGATGTATGTAACATTTTATCTTAGCGTATTGTTTTATGTGATATGTTTTTTAAAAAATTAAACTGACAAACTTGTGAAATTTTTAGGTCCTTGTACTGCCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019230

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019230&oldid=47986"