BGIOSGA019232

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Revision as of 02:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019232| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019232, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA019232

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019232, complete gene.

LocusTag

OSJNBA0034O12.11

Ensembl Transcript ID

BGIOSGA019232-TA

Ensembl Protein ID

BGIOSGA019232-PA

Length

4600

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3782490..3787089

Sequence Coding Region

3782490..3782661,3782756..3782936,3783727..3783880,3783968..3784099,3784326..3784403
,3784484..3784588,3784677..3784757,3784849..3784979,3785057..3785151
,3785466..3785565,3786437..3786551,3786632..3786742,3786943..3787089

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3782490..3787089 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3782490..3787089 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCCGTCGGCGGCCACGCGCAGGAAGCTGCAGCGCAAGTTCAAGCTGCGAGGCTTCACCCTCAAGGTGGACGCCCTCGAGGAGGCCGCCGCCTTCCTCGCCCGCTTCCCCGACGCCGAGGACGACGCCCTCGACCTCCTCCTCGACGAGCTCGACAAGGAGCCGCTGCAGTCGTCGATTCTTGACCGGGACGCGGTGCGGCGCGTGGTGGCGCTGCTCGTCGAGGCGGACGAGGCGGTGGATGCGGCGTCTCCGGCGGCCACCAGCGCGCGCTCGGCGCTGCGGGTGGTGGATTCGTTCGTCGTGCCAAGGTTCCACTACGATCCGATCAAGAAAGTCTTCTACGAGCATACCAGCAGATTAGCCATACATGGAGAAGCTGGAGATAAAGCAGCCCTGTACAGGGACAGGTATCAGGTTCTGCTTCAGAGGCTAGCTCGTGATATATACTTCTCTAAGCCAGCTTTTGACACTGTTATGACCGAAGATGATAATTGTGAGATAACTTCTATTCAGTCCCTAATTGGGTGCACTGGTCGGAGATGGATTATGGGGGTCATATCACAGTTGGAGGAACGTCAATTCTACTTGGAGGATCTTACTGGAGCTGTGCCAATTGACTTATCGAATGCTAAAATCACTTCAGGTTTCTTCGTTGAAAATACTGTAATTGTAGCAGAAGGGGAATTGCTTTCAAATGGCATTTTCCAGGTAAATACATGTGGATTTCCTCCTTTAGAGGATAGAGAAGCATCACTTTCGATGCTTATGGGGCTAGATTTCTTCGGTGGAGGTGTCATACCAACTGAAGAAACAGTAAGGCTATCAACCTTAGAGAAGAAGGCCATGAATGATATGTTTGTTATACTTTCAGATGTTTGGCTTGACAATTATGAGACCATGGAGAAATTAGGTGTTGTTCTTGATGGTTATGATAGTCTAGAAGCAGTTCCTTCCCTTTTTGTTTTAATGGGCAATTTCTGCTCCCGGCCCTGCAATCTGGCATTCAATTCATTTGAAGAACTCAGATTGCAGTTCGGAAAGCTTGGTGAGATGATTGCAGCTCGATCCAGGTTAAAGGAACACAGTCGTTTTTTGTTCATTCCTGGTCCTGACGACGCAGGCCCTTCTAAAGCCCTTCCAAGGTGTGCACTTCCGAAATATCTAACTGAGGAACTGCAGAAGCACATCCCAAATGCAATATTCGTAAGCAACCCTTGCAGGGTGAAGTTTTATACACAAGAAATTGTATTTTTCCGGCAAGACCTCCTTTATAGGATGCGGCGGTCTTGTCTGATTCCCCCAACAACAGAAGAAACAAGTGACCCTTTCGAGCATCTGGTAGCAACCATCACCCATCAGAGTCATCTTTGCCCATTGCCTCTTACAGTTCAGCCAATCATATGGAGCTACGATCATTGCCTTCGACTCTATCCTACTCCTCATACGATAGTACTGGGCGACAAGAGCGACCAGAAGGCCTTCAAATACACAGGAATAACTTGCTTCAACCCTGGTTCTTTTGCTAACGATAGCACCTTTGCAGCTTACCGTCCTTGCACTAAGGAGGTTGAGCTTTCTGCATTAGAAAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MAAPSAATRRKLQRKFKLRGFTLKVDALEEAAAFLARFPDAEDDALDLLLDELDKEPLQSSILDRDAVRRVVALLVEADEAVDAASPAATSARSALRVVDSFVVPRFHYDPIKKVFYEHTSRLAIHGEAGDKAALYRDRYQVLLQRLARDIYFSKPAFDTVMTEDDNCEITSIQSLIGCTGRRWIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQVNTCGFPPLEDREASLSMLMGLDFFGGGVIPTEETVRLSTLEKKAMNDMFVILSDVWLDNYETMEKLGVVLDGYDSLEAVPSLFVLMGNFCSRPCNLAFNSFEELRLQFGKLGEMIAARSRLKEHSRFLFIPGPDDAGPSKALPRCALPKYLTEELQKHIPNAIFVSNPCRVKFYTQEIVFFRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWSYDHCLRLYPTPHTIVLGDKSDQKAFKYTGITCFNPGSFANDSTFAAYRPCTKEVELSALES</aaseq>

Gene Sequence

<dnaseqindica>1..172#267..447#1238..1391#1479..1610#1837..1914#1995..2099#2188..2268#2360..2490#2568..2662#2977..3076#3948..4062#4143..4253#4454..4600#ATGGCGGCGCCGTCGGCGGCCACGCGCAGGAAGCTGCAGCGCAAGTTCAAGCTGCGAGGCTTCACCCTCAAGGTGGACGCCCTCGAGGAGGCCGCCGCCTTCCTCGCCCGCTTCCCCGACGCCGAGGACGACGCCCTCGACCTCCTCCTCGACGAGCTCGACAAGGAGCCGCGTAACCAATCTGTCTCTCCCCTCTCTCTCTCTGCCCTCCCCGTGGTCTCGTCTCCAATTTGGCTATCGTTTGGTGCGCGCGCGCGTGCGTGCAGTGCAGTCGTCGATTCTTGACCGGGACGCGGTGCGGCGCGTGGTGGCGCTGCTCGTCGAGGCGGACGAGGCGGTGGATGCGGCGTCTCCGGCGGCCACCAGCGCGCGCTCGGCGCTGCGGGTGGTGGATTCGTTCGTCGTGCCAAGGTTCCACTACGATCCGATCAAGAAAGTCTTCTACGAGTACGTAGATGCCGCTTCTTCCTTTCCTTGTACATCCTCTTGAGAATTTCGCTATTTCCTTTTCCCGCTTTGGTGTTGAACTGTGGTTAGAATTGCTACATTGACGAAATTGAGTTCTAAGTCTGGCTAAATCTTCAATGATTCAACAAAGAATTTATGTAGGGCATAGATTCCAAAATGATGCTACTGATTTTCTTTTAAAATAATTAAACCTCATTTCTGTGTGAAGAGAAAACTTGTTAGATGTATAGTATTTTTTTTTGTTTGGATTCAGTATATTGTGCTTCACTAGATGAGATTGTTAGCTTCTTCATGAGTATTGAACTATTGATTGGGTTTTGGAAAAAAAATCAAATGACTTGATTTTATGTGACAATTAAAGATTTGCCACTCCAATGAGATGCAGTTGAGACTACTGTATGTATGGCTAGGTTAACATGTCGCCTGCTCCATCCTCATGCCAATAAGACATTTAGCGGCAATATTTGCAGTGGCAACTCTTGTTAGATATGGAAGTAACTTCTGGCCTACTGCACCATGGATGCACACATCTACTCCCTCCGTCCCAAAATATAGCAACTTTTGGCTATGAATCTGGACACACAGTTGTTCAGATTCAAAACGCTTATATTTTGGGACTGAGGGAGTATTTAATTATGAGCATCATTGATTACACATAGATTCTCTTGATGCTAGGACTAATGAGCTTAAAGACTGTCCTATTATTTCTAACCAAGACTGAATTATAAGTTATAATGAGTTAACAGCCCTGAAATATGCTATTATATAGGCATACCAGCAGATTAGCCATACATGGAGAAGCTGGAGATAAAGCAGCCCTGTACAGGGACAGGTATCAGGTTCTGCTTCAGAGGCTAGCTCGTGATATATACTTCTCTAAGCCAGCTTTTGACACTGTTATGACCGAAGATGATAATTGTGAGGTATTTTTTTTTGTTTCATGTCATGATTTTCACAAAATATTCTTAGTTCTTGTATGTGAAATTACTTACACACTTTTTTACATGTAGATAACTTCTATTCAGTCCCTAATTGGGTGCACTGGTCGGAGATGGATTATGGGGGTCATATCACAGTTGGAGGAACGTCAATTCTACTTGGAGGATCTTACTGGAGCTGTGCCAATTGACTTATCGAATGCTATATCCTGAGAGCCCATTATTTGTCATATTGTAGTATGATTTATCTAAAAATTGAATAGTTTCTTTAGCTACCTATGAAATATATATAACAACAAAAGGTCTGCTCAAATTTGAGTGATAACATGTCATTAATTCAGGATTCATGTTTGACACTAAAATTTAATTTGATCCATATCAATCTCTTGCTTACTCAGAAAAGTGTTATGCTTTCCTTAGCACAAAACACAAAATCACTTCAGGTTTCTTCGTTGAAAATACTGTAATTGTAGCAGAAGGGGAATTGCTTTCAAATGGCATTTTCCAGGTCTGTAATTCTTATCAACAAGAATGTGTTCAGCTCTTGTATTGTTGTGTTCAATCTGATTTTGTTCCTATCATCTGCAGGTAAATACATGTGGATTTCCTCCTTTAGAGGATAGAGAAGCATCACTTTCGATGCTTATGGGGCTAGATTTCTTCGGTGGAGGTGTCATACCAACTGAAGAAACAGTAAGTTCAAATATTTCTGTTCCGCATGTAATCTGACTTTTCAAAATAACCTTTACTGATTAATTTTATCAATGGAAATATCAAACAGGTAAGGCTATCAACCTTAGAGAAGAAGGCCATGAATGATATGTTTGTTATACTTTCAGATGTTTGGCTTGACAATTATGAGGTATCTTCATTTGTACTAGGCCCTATTTCAAATAACCATTATTATTGAGCCATATTCTCAGGATGTTCATATGTGTTTTCTCGTAGAGAAGACCATGGAGAAATTAGGTGTTGTTCTTGATGGTTATGATAGTCTAGAAGCAGTTCCTTCCCTTTTTGTTTTAATGGGCAATTTCTGCTCCCGGCCCTGCAATCTGGCATTCAATTCATTTGAAGAACTCAGGTCTGGCTTTTAAGTTATATAAGATAGTCAAAGCTTGTATTTTGTTTTCACCTTCCAATCGAAGAAACCTATTGTAGATTGCAGTTCGGAAAGCTTGGTGAGATGATTGCAGCTCGATCCAGGTTAAAGGAACACAGTCGTTTTTTGTTCATTCCTGGTCCTGACGACGCAGGTACTCGAAAACCCATTGATTTGCTTTTAGCTGACAACTGTTCATATTCACATGTGAATTTGCTCCAACTCAATTTTGTTTGCTCCAAAATGTATTAAATCTGAGTTGGTCTATTCTTTTTTCTATGCCCTACTATTATTGGCATTCCTTTTGTATTTAAATTAATGAATGCTGTGATATGGTTGGTTTGAAATGAACTCGTTAATTGTAAATGGAATAATGTCATTTTATGTCCCAGATAATTGGAATGAGATGTTTCTTTCTCTTCCTTTTTCTGTGATGTGCTATTTCTCTTACTTGATTACATATTTCAGGCCCTTCTAAAGCCCTTCCAAGGTGTGCACTTCCGAAATATCTAACTGAGGAACTGCAGAAGCACATCCCAAATGCAATATTCGTAAGCAACCCTTGCAGGTTCGACATTAAAATATTGCCTTGTATGATTGTGTCATTATCTGAATTTCTACATTGTGCCTGGGTTTTTTATGAAGCTATGGGCACCATCAATACATGGATAAACATTTCTGGTTAAAACTATTATTATATGTACAAATTTAGAAATGTCAAAAATAAGCATTTGGACAAGAATGCATGATAGTGCTATTTCCTTTTTTTTTCAAGGCTGAAGGATAAAAACGCTGGTTTCTTTTTATTGGAACTGAAAATAGGATGCTGTTTCTTTTTATGTTTCTACCACATCGTAAATTCGTTATATTTAACACCCAATTGTTTTCACCATAAGTCCACATTTTATGGTCAGGTCCATAGTCCATTGCATGATTCAGACTAAGCTGTTGGTAACCTGTAGTTATTTTGACGACTCACAGAACCCCCTTATTATTGTTCTGAGAGCTATCCACACAATATCATGATCATGATGCACACTAGTAATAGCTTCATGTTAAATTGAAGAGGCTATAATCACCATACCTGTACTAGTCTACTGATGTGTATTAACAGATTTTTGGTCGGTGGCATGATGCATGATGCGCACATTCTACTTTTTTGTACTAGGCATTATCTTCCTCATTTTATCAATTTTTTTCTGAACTTATCTGATTCTATCTTTAGTGATTCCACTGTCATTTCAGTCAATCTTGGAAAAAGCTTCATATACTCACTACCCACTGAGACTACCATATAGTGATAGATTGGCAGAGAAGAGCTTGTCTAAGCTATGCCATTAACCCTTTTTGAGTTGTCATGATTAAGAAAACACTTAAGTTTGCAGATTGTTCAATTATTATCTGTTCTATCTCCAGTAAATAAAACTGTAATTATCCAGGGTGAAGTTTTATACACAAGAAATTGTATTTTTCCGGCAAGACCTCCTTTATAGGATGCGGCGGTCTTGTCTGATTCCCCCAACAACAGAAGAAACAAGTGACCCTTTCGAGCATGTATGTTAAATACCCCTCCTTTGTTGTTATTTCAATAAGCATATATTGTTCAAAGAATTAACACATCATTTTCTTTTCAGCTGGTAGCAACCATCACCCATCAGAGTCATCTTTGCCCATTGCCTCTTACAGTTCAGCCAATCATATGGAGCTACGATCATTGCCTTCGACTCTATCCTACTCCTCATACGGTATGCAATTTAGGACATAAGCCTATTCAGGACCTTGAAATGTGCTCTAAATTTGTTGCGATGAATGTGCTGTTGTGCTCATTTAATTGCTTGACCGTGCATGTGTGATTACTTTCTTTTGTATAACTATTACAATTCATCACTATAAACAAAAGTTTTGGACGTTCTTTGCTGATTTTCTTCCTGAAAAACTTCTTCAGATAGTACTGGGCGACAAGAGCGACCAGAAGGCCTTCAAATACACAGGAATAACTTGCTTCAACCCTGGTTCTTTTGCTAACGATAGCACCTTTGCAGCTTACCGTCCTTGCACTAAGGAGGTTGAGCTTTCTGCATTAGAAAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019232

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019232&oldid=47988"