BGIOSGA019237

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Revision as of 02:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019237| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019237, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA019237

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019237, complete gene.

LocusTag

OSJNBB0099P06.6

Ensembl Transcript ID

BGIOSGA019237-TA

Ensembl Protein ID

BGIOSGA019237-PA

Length

6764

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3887983..3894746

Sequence Coding Region

3887983..3888039,3888148..3888272,3888400..3888475,3888649..3888750,3888840..3889055
,3889985..3890065,3890923..3891006,3891176..3891280,3892109..3892287
,3892452..3892536,3892660..3892861,3892936..3893005,3893124..3893193
,3893516..3893605,3893792..3893860,3894352..3894450,3894636..3894746

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3887983..3894746 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3887983..3894746 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGACGAGACCTCCACCTCCGTCGCCACGCAGTCGCAGGAACCTGCAGCAGTGGGAGCTGGGAGTGTGAAGCAACAGCTCTCCAAGTTGGTTATTGCATCACTCCGGACTACGGTTCCCGAAGTGGAAGTCGATCCTATGGTTGAAGTCTGCACAGCAAAGTTTGGTGACTACCAGTGCAACAATGCAATGGGATTATGGTCAAGAATTAAAGGATCTGGAACAAGTTTCAAGAACCCCAATGCAATTGGACAGGCCATTGCGAAGAACCTGCCTCCGTCTGATATTATTGAATCCACATCTGTCGCTGGACCTGGTTTTGTGAATATTGTCTTGTCCAACAGCTGGGTTGCAAAGAGAATACAAGGTATGCTTGTGAATGGTATCAAAACATGGGCACCAATCCTGCCAGTTAAGAGGGCAGTGCTTGATTTCTCATCCCCTAACATTGCCAAGGAAATGCATGTTGGGCATTTAAGATCAACAATCATTGGAGACACCCTTGCCCGCATGTTTGAATTTTCCAATGTTGAAGTTCTCCGCCGTAATCATGTCGGGGACTGGGGCACACAGTTTGGAATGCTCATACAATATCTATTTGAAAAATTTCCAAATTGGGAGGAAATTGGTAGCCAGGCTATTGGTGACCTTCAGACTTTCTATAAAGCGTCCAAGAACCGCTTTGATGGTGATGCAGAATTTAAAGACAGAGCTCAACAAGCAGTCGTTAGACTTCAGGGAGGGGAAGAGAGATACCGTGCTGCTTGGAACAAGATTTGTGAAATCAGCAGGAATGAATTTGACATGGTTTACAAGCTCTTGAATGTAAAGCTTGAAGAAAAGGGAGAGAGCTTTTATAATCCTTTTATTCCACAAGTCTTGGAAGAGTTGAATAACAAAGGTTTGATCAAAGAAAGCGAGGGTGCTAAAGTGATATTCATAGAAGGCCATCAAATCCCTTTGATAGTGGTTAAAAGGGACGGTGGCTTTAACTATGCCTCAACAGACTTAGCTGCTCTATGGTACCGTCTTAATGTTGAGAAGGCAGAATGGATAATATACGTAACAGATGTTGGACAGCAGCAGCACTTTGACATGTTCTTTAATGCTGCCAGAATGGCTGGCTGGCTTCCAGATCCAAAAGAAAAGAAATATCCAAAAACGAATCATGTTGGGTTTGGTCTTGTTCTTGGATCAGATGGCAAGCGTTTCCGAACTCGTAGTACCGAAGTTGTTCGATTGATAGAGCTACTTGATGAGGCTAAATCTCGGAGTAAATCAGAACTTCTCCAGCGACTAACAGAAAATGGTAAAATTGTTGATTGGACTGAGGAGGAACTGGAAAAGACTTCAGAAGCAGTAGGATATGGCGCTGTCAAGTATGCAGATCTGAAGAACAATCGTCTTACCAATTACACATTTAGCTTTGAACAAATGCTGAGTGATAAGGGAAATACAGCTGTTTACCTTCAGTATGCTCATGCTCGCATTTGCTCTATAATCAGGAAATCCAACAAGGATGTAGAAGAGCTGAAAATGAGTGGTGCCATTTCTCTTGATCATCCAGATGAGCGTGTCTTGGGACTGTACCTGATCCGATTTGCAGAGGTTGTGGAAGAGGCGTGCACCAACCTACTTCCGAATGTCCTGTGCGAGTACCTGTACAACCTTTCTGAAATGTTCACAAGATTTTACACCAACTGCCAGGTGGTTGGATCGCCCGAGGAGACAAGCCGACTGCTGCTCTGCCAAGCGACGGCGGTCGTGATGCGACAATGCTTTGAGCTGCTCGGAATTACACCAGTTTACAAGCTGTGA</cdnaseq>

Protein Sequence

<aaseq>MGDETSTSVATQSQEPAAVGAGSVKQQLSKLVIASLRTTVPEVEVDPMVEVCTAKFGDYQCNNAMGLWSRIKGSGTSFKNPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNSWVAKRIQGMLVNGIKTWAPILPVKRAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVLRRNHVGDWGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQAVVRLQGGEERYRAAWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPFIPQVLEELNNKGLIKESEGAKVIFIEGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGLVLGSDGKRFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELKMSGAISLDHPDERVLGLYLIRFAEVVEEACTNLLPNVLCEYLYNLSEMFTRFYTNCQVVGSPEETSRLLLCQATAVVMRQCFELLGITPVYKL</aaseq>

Gene Sequence

<dnaseqindica>1..57#166..290#418..493#667..768#858..1073#2003..2083#2941..3024#3194..3298#4127..4305#4470..4554#4678..4879#4954..5023#5142..5211#5534..5623#5810..5878#6370..6468#6654..6764#ATGGGGGACGAGACCTCCACCTCCGTCGCCACGCAGTCGCAGGAACCTGCAGCAGTGGTGAGTTTTGGATTGCTGGGTCTGGACATGACTGTATTTTTTGTGCTTCCCACTTTGCTACTCGCTTGAGCTCGTTAAATCTGGAAAATGTGTTGGTTGTCTGCACAGGGAGCTGGGAGTGTGAAGCAACAGCTCTCCAAGTTGGTTATTGCATCACTCCGGACTACGGTTCCCGAAGTGGAAGTCGATCCTATGGTTGAAGTCTGCACAGCAAAGTTTGGTGACTACCAGTGGTATGTTATTGGTTTCTTGCTTTAGCCACTGTTTTGCATCTCATGAACGATATTTTTGCTTGCTACTACTCTTAGCTAGAGTCCCTTTTACAAGCTAATCAAGTGATTCTTTGTAAATCGTGTTCAGCAACAATGCAATGGGATTATGGTCAAGAATTAAAGGATCTGGAACAAGTTTCAAGAACCCCAATGCAATTGGACAGGTTAGAATGATCTTCACTTGTTGAAGTATGGTGTTTTGCCTCAAGAAAATTTCATAGACAAAGAAAATTCTCCCATAGGCTCTGTTACTACTATTTCCTTGCTTTTTCCCTCTCTTTCTATGCATGCTGAAACTCTGTTAGACTTAACATACTGGACCATTACATTTTTCCAGGCCATTGCGAAGAACCTGCCTCCGTCTGATATTATTGAATCCACATCTGTCGCTGGACCTGGTTTTGTGAATATTGTCTTGTCCAACAGCTGGGTTGCAAAGGTCTGGTGTCTTTTATCTGTGAAGTATCCTGGCATTACTTGATTACTCATTCCATTCCTGCTAAGCATCAGTGAACTACAATATTGCAGAGAATACAAGGTATGCTTGTGAATGGTATCAAAACATGGGCACCAATCCTGCCAGTTAAGAGGGCAGTGCTTGATTTCTCATCCCCTAACATTGCCAAGGAAATGCATGTTGGGCATTTAAGATCAACAATCATTGGAGACACCCTTGCCCGCATGTTTGAATTTTCCAATGTTGAAGTTCTCCGCCGTAATCATGTCGGGGACTGGGGCACACAGGTAACAGGCCTTGTTGTTGTGACTTCAAACTGCTTTACTACTTCTCGTTGTTGCAAATGTTGTTTATGATGCTTTAGTTTGTTGATCCTGTTTGTTTGATGCTGCTTGGATTATGCACAGTCTGCCCTAATTTTTTTTCCCTGATGGGACCGTTTCTTTTGCTTCTATCTTCTTACTCCCTCCACATCGCAATGTATGTTTGTGGAGTTGAGAGTAGTTAATATAACTTCCTACCATTTAGCCCTAATTTCGTGCAACAAAATAGGCTGGGTAATTGTGGCATGCCTTATGGTAGGGGTATGTTGGTCATCTGCATTAACATTTTCTTATAGTTAGTGCATTGTTGGCGTGTGAATGATGGCCATGGAGATATATTGTGAACTGAAGGGAGTACCTAGATGTTCTTCATGCCTTCAATTTCTCTACATCCTGATGCACTTAAGGTTTAGCTATTGCTATCTGTTGTGCCTGCAATTAGTTGAATAGTTCCGCTGACATTATTTTCCATGAAATCTTACGTAGGAGGGTAGAACACTTTAGTTTACTTTATTTATTGCCAAAGTATGCACTATTTCTGTACTCTGGTACAATTTAACTTTCTTACATTTTATAACCCAATTTTGATTTCTCGACCTGATTATTGTTGTGTTTTCCTTTAGCTGCGTAACTGAACTTTATAACCTTGCAGTGGCTAGGTTATACTGTCAATATCTAGATTTCCTTTCTATGGATACTGAAAACATGCTTATAAAGTACTTATGGCATGGTATTAGAGCCCTGATATCTTATTTTAGTGGAAACTTCTACTACTTGTTATTCCTAGAAACTAGGTACTACAATTATGCTTATTCTCTTGGAGGTGTTCAAAACTGAGACAGTGTACTGGTTTTGTACTGCATACTAAACTGTGCCGATCTTTGTTTCTGCAGTTTGGAATGCTCATACAATATCTATTTGAAAAATTTCCAAATTGGGAGGAAATTGGTAGCCAGGCTATTGGTGACCTTCAGGTAAGGCTGTTCCCTGCACTGATGCTAGACTGCTATATATCACTTGCCGTCTGGCATGAAAACATAGAAATGCATGATGAAAAGTAAGGCATGCTCAATTAAAGTATATAAATGTGTATTTAGTTCGATACGGGATATCCATGTCAAAACCTATATCATAAAAATATTGACATTTGAGTACAGGGTAATTAATTGTATAAAAATAAATTACAGTGCTGAGTTATTGTCTTGTTCATGTTAGGACTCATACGGTGCTTCGCTTGTCTATATCATTTATTTGGCATCTTAAACTTCTCAAGCTTAACCTGTGCATACAATATTGTTAGGTTTTAGTGTTCTATGCCTATGAAAGTGCAAAAGGCCAATAACTGATGGATGAAATTTGTGAATCATGTGATGTTATTTTGCGCACCAAATTGCATTGCATCGCATTGCCTTTTTTCCCCATATCTTTAGCTCAAGTAGTGTGGGCCAGGAGGTTGATTTGAAAACTCAATGCATCGAATCTTGCTTGTAGCTGCTAATTTCCTATTTTGGTGGTTGCCTACTTCCCTTCCTAGTAATCCATCACAATATTTTGGAACTTTAAAGCTGTGCTCAAAATTATTTCTGAATATGTATGTCATTCAACATACACTCCTTACACTGTAATCATACAGAAACCATGCACACATTATCTCATTTAGTTACTACCATTTGCATGTTCAGTTGTGTACAAATGTATTTGTCTTCATCGGACAATGTTGCTTCCTTGTGTCCCAATTAGACTTAATTTCTTCGTGTTATGTATTTATCTTTGCCAAAGGTGCAAAGTAGCACTTAGTTTGTATCATGTACAATTTGGTCATCTGTTACAGACTTTCTATAAAGCGTCCAAGAACCGCTTTGATGGTGATGCAGAATTTAAAGACAGAGCTCAACAAGCAGTCGTTAGACTTCAGGTCAGTGCACCTTCTTGGATCTGGAATATGTTAATGTTTTTTTTTTTTTTGGGGGGGGGGGGAGACATGGAAACACTTTGCGTGTCATTCCATTAGAGATAGAAAATGAGTATGTTAAAATTGCATCTTATCATCCTCATACAATGCCTAAGAAATATATTAACTGTAGGGAGGGGAAGAGAGATACCGTGCTGCTTGGAACAAGATTTGTGAAATCAGCAGGAATGAATTTGACATGGTTTACAAGCTCTTGAATGTAAAGCTTGAAGAAAAGGTAGTGTCACACTCTATTGGACGCGACTTATATTTCTTTAGAAGGTTGCTTATCAATAACATGAATTTGCTACCTGAAATTTCTGTTTGTTGTTTTAGTAGAATATTTGCGCAACCATCATCCCTTTCCTTTTCTATATAGGATCTGAGACTTAAACTTTTACTGTATCAATTTTTATGATATTTTTGGATAGATTGTTCTTTCTCTTGTTCCCATCTGAGCCATTTTGAAAAGTCTCTGATAACTAACCACTAGTTTTACATGACTCAACAAGGTGTACCTCATCTTCATATGAAGAGTGGAAACATTTTGCTGCCAAAATTTTACAAATTAGTCAGTTGCTGATTGGGGTCCTTTTACTTGATATTTCTCTGTTGCATAGCTTGTGATTCCTATTGGAAGATGTATTGACGTTCATATTCCAGGGATGTTAGAAACACATTCAATTTGTTGAACTTCTGTCTTTTTAGCTGAATCCATTAGTCAATATTTTCAGGAGATATTTATAGGGCTTCACTTATCTGTTTTGTCGATATGTATTTGTTGAAGTTTCCGATGGCACTAATATTAATTTAGTTGGATTTCTGGATTTCTTTCTTATTAGTAAAAACATCAGTTTGTCTGTTTATGATCTGTTACAGCTTGTATGGCTGCATTTTATCTTAATCCATTTTGACAATAGCACCTGTAGCTGTGTGTACTTGCTTTCAACCAACTTTTGGCTATTGGTATCATGAAATGCTTATGTTTGTCGTTTTCTTCCCTGAGCATCCAAGCAGCTTGTTGATTTATATTTTGTAGTGTTGAGAAGAGAGCTATTCTTTTCAGGGAGAGAGCTTTTATAATCCTTTTATTCCACAAGTCTTGGAAGAGTTGAATAACAAAGGTTTGATCAAAGAAAGCGAGGGTGCTAAAGTGATATTCATAGAAGGCCATCAAATCCCTTTGATAGTGGTTAAAAGGGACGGTGGCTTTAACTATGCCTCAACAGACTTAGCTGCTCTATGGTGAGTTGCTAATCGATAATTTTGGTGTGTTCCTACAGTGCAATTACTCTTATATTAGCTATAATTTGCAGAAACAAAGTGAATATATTTTCGTAGTTGATTCAGTCTATTTCCACAGGATCAGAATTTGTGAATGTAATCGTTCTATTTGTGCTTTTATGCAGGTACCGTCTTAATGTTGAGAAGGCAGAATGGATAATATACGTAACAGATGTTGGACAGCAGCAGCACTTTGACATGTTCTTTAATGTAAGAATGCGCCCTTTGTCTTCATAACATGTTACATAATCTTGGTGCAAGCAATTCTTATCAGATAATCAATTAGATATATTATTTCATTTCCCTTTGCTAAAACTTTTGTTGTGTTAACAGGCTGCCAGAATGGCTGGCTGGCTTCCAGATCCAAAAGAAAAGAAATATCCAAAAACGAATCATGTTGGGTTTGGTCTTGTTCTTGGATCAGATGGCAAGCGTTTCCGAACTCGTAGTACCGAAGTTGTTCGATTGATAGAGCTACTTGATGAGGCTAAATCTCGGAGTAAATCAGAACTTCTCCAGCGACTAACAGAAAATGGTAAACGGTCATTATTTTCTAGTTTCTCTCTCTTTTGTTTGCCTGAGGTAAAATATGTTCATGAATTTATTTAGGTAAAATTGTTGATTGGACTGAGGAGGAACTGGAAAAGACTTCAGAAGCAGTAGGATATGGCGCTGTCAAGTATGTACAAGATTTCTTCTTTCAGGAAGACAAATATGTTGAACTGAAATATGATAACAAAGCTTTTTAAATGCTTATCCAATTAGTACTCTTATGTTTTTCTGCCTGATAAACACAGGTATGCAGATCTGAAGAACAATCGTCTTACCAATTACACATTTAGCTTTGAACAAATGCTGAGTGATAAGGTATTTCTAGACTCCACTATTTGTTTACTTGTATAAAAGGGTGTTTTTCTCCATTAATTTTATTTGTGTTAAAACTTTTATGCGCCACATATTTGCTTATGATGTATTCCAGTATTTGTGGAAGGATCTGTTGCTCTATGTTCTGCATTGGATATTGAAAATCACAGTCTATAGTGGTCGCTCTTTTGCATAAATGAAAAAATATGTTCTTGAGTAGTTTCTGGGCAGATTCTTTATATTAGTAAGTAGTTGGTGAACCCATTCACCTTCTTGCTTACTCTCATTACTTGTTATTGACAAGCTCATTCCTTTTTGTCACCAGGGAAATACAGCTGTTTACCTTCAGTATGCTCATGCTCGCATTTGCTCTATAATCAGGAAATCCAACAAGGATGTAGAAGAGCTGAAAATGGTAATACTTGTGTTATTTCTATGCACTGATTCTATTGTTGATTTTATAAAGTCCTGCTGTTGTTATTTTAGAGTTCCATCATCTTTTTTTTTTTTACTTGAGTTCCATCATCAATTATTCGTTCTCTTTCAGCTATCAGACATGGATTTAAACACGTTGACTCTGTTTTCCTGTTTTTCTTCTCAGAGTGGTGCCATTTCTCTTGATCATCCAGATGAGCGTGTCTTGGGACTGTACCTGATCCGATTTGCAGAGGTATCATTGGCGCTATTAACTGAATCTCTTTTCTTAAAGATCTTTTTTCAGACCTATATTTTCATAAGGCCTAGGAACTAAAAATGAGCTAAAAAGGGTAGTCCAGTTTATTCTTGAACAGCAAACAGCCGCAGTGGTCTGACAGCATGTTGATTGTGTGCTCTTGTTTGGAGTTGTTTGTGCTTAGCCCACAAGTAGGTGCATGTTACTGAGATTTTCCTGTTCAACTTTAGGTGTGGTTAGTGCAAGAACAATGGAAAAACTAGAAGTCATACATTACATCATTATTAGGTGTACGAACATGTTGCACTAATCAGTCATGGAAATAGTATCAAAATACCAGTCAAGCGCTGTAGCATTTCATTCAGATAATTCCTACGAGGTGTAACAAACACCGATAATTCTATTTCATAGTTTAGTCAACAATATGGCTTAATTCACAACTAAAGCTTTTTTCCCCTCTTCTGATTTACGTTTGCTGTGTCTGTCAGGTTGTGGAAGAGGCGTGCACCAACCTACTTCCGAATGTCCTGTGCGAGTACCTGTACAACCTTTCTGAAATGTTCACAAGATTTTACACCAACTGCCAGGTATACTTCCATCTGTTTACATCATTTTCCCCTGGTGAATCTTACTTTCTTCCAGAACTTGAAAAAAAGTTTCTGACATGTTCACCAAGTGAATTTTGTTTCTCTTATAAACTAGAGAATAATTATACCAAACATTCAAAAGAAATGATTTTTACTGCGGGCTCACTTTACGTTGAACCCATCAGGTGGTTGGATCGCCCGAGGAGACAAGCCGACTGCTGCTCTGCCAAGCGACGGCGGTCGTGATGCGACAATGCTTTGAGCTGCTCGGAATTACACCAGTTTACAAGCTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019237