BGIOSGA019248

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Revision as of 02:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019248| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019248, complete gene.| tag = OsJ_172...")
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Gene Name

BGIOSGA019248

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019248, complete gene.

LocusTag

OsJ_17273

Ensembl Transcript ID

BGIOSGA019248-TA

Ensembl Protein ID

BGIOSGA019248-PA

Length

1635

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4261309..4262943

Sequence Coding Region

4261309..4261318,4262015..4262531,4262620..4262701,4262878..4262943

Genome Context

<gbrowseImage1> name=IndicaChromosome05:4261309..4262943 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:4261309..4262943 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGGAGACCTGCAAGGTGCTATCGCCAGATCAAGAACAAGCCGTACCCCAAGTCAAGGTACTGCCGTGGTGTCCCTGACCCCAAGATCAGGATCTACGATGTCGGGATGAAGAAGAAGGGTGTGGATGAGTTCTCCCACTGTGTGCATCTCGTCTCTTGGGAGAAGGAGAATGTCACCAGTGAGGCTCTTGAGGCTGCGCGTATCGCGTGCAACAAGTACATGACCAAGTCTGCAGGAAAGGATGCCTTCCACCTCAGGGTTCGGGTTCACCCGTTCCATGTGCTCCGTATCAACAAGATGCTTTCGTGTGCCGGGGCAGATAGGCTCCAGACTGGAATGAGGGGTGCTTTTGGGAAGCCACAGGGAACCTGTGCTAGGGTGGATATTGGCCAGGTCCTCCTTTCTGTGCGGTGCAAGCCCAACAATGCTGTCCATGCCAGCGAAGCCCTCCGTCGTGCCAAGTTCAAGTTCCTGGTCGCCAAAAGATCATTGAGAGTAGAAAGTGGTAAGTATCAAACAGGGGGTTTCACCAAGTTCAGCCGCGATGAATACGTCAGGCTTAAGAGCGAGGGTAGAATCATGCCTGATGGTGTCAATGCTAAGCTACTTGGTTGCCATGGTCGCCTCTCTGCTCGTGCCCCCGGGAAGGCCTTCCTCTCAGCCGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFLVAKRSLRVESGKYQTGGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGCHGRLSARAPGKAFLSAA</aaseq>

Gene Sequence

<dnaseqindica>1..10#707..1223#1312..1393#1570..1635#ATGGGGAGGAGTAAGTCTAACCATTTCCTGCTCTACCGCTCGTTGTCTTGCTGTTTGTTCCACGGTTGCGCTGGATCGGTCGCCGCGGCTCCCTGATTTCAGGCGCGTTTTGGGCGTTTGGTTTAGATCCATAGTAGCTGGGCGCTGCTGGATTGTTGCTGTTCCCGGTGTTGATCTGTGTTTTGCTTTGATGAATTTAGGTGTAGATAGATTTTGTAGTTGTTTCGTTGCATATCTCGTTAGTTTGCTTACTCAACCTGAAGGAGTCATGTTGGACTTAATAGGATGTGAATATTGTTGGGGGAACTGTACCGATCTTTGATTTTCACAGATAATGGTAGTATGATATGATTAGTGGTTCTCTGTGAATCTAAATGATTTATTCTGATGTAGCTAGCAGATGTAGATGCATTTATCCTAGCTAGAAATGGCTTGTTTGTGGTGGTTTTGTTGTTTGAAGCGAATCCCTGTAATGGATTTAGTTACTTCATGGCTATTTCTATATCCACTATTTTCTTGTTCATCGATCAATTATGATTATTTAGATTAATGTAATGGATTTAGTTTCTTTCATGACTTTGTATATTCACTATTTGCGTGTTCATCGATCAGTTATGAATAGTATTCAGATTAACAGTGATGGGGCTGTAGGTGCTTTAGGGTGTTTCTGAGTAACTAACTTGACTTTGTGGCTTGCTTTGGTTAGGACCTGCAAGGTGCTATCGCCAGATCAAGAACAAGCCGTACCCCAAGTCAAGGTACTGCCGTGGTGTCCCTGACCCCAAGATCAGGATCTACGATGTCGGGATGAAGAAGAAGGGTGTGGATGAGTTCTCCCACTGTGTGCATCTCGTCTCTTGGGAGAAGGAGAATGTCACCAGTGAGGCTCTTGAGGCTGCGCGTATCGCGTGCAACAAGTACATGACCAAGTCTGCAGGAAAGGATGCCTTCCACCTCAGGGTTCGGGTTCACCCGTTCCATGTGCTCCGTATCAACAAGATGCTTTCGTGTGCCGGGGCAGATAGGCTCCAGACTGGAATGAGGGGTGCTTTTGGGAAGCCACAGGGAACCTGTGCTAGGGTGGATATTGGCCAGGTCCTCCTTTCTGTGCGGTGCAAGCCCAACAATGCTGTCCATGCCAGCGAAGCCCTCCGTCGTGCCAAGTTCAAGTTCCTGGTCGCCAAAAGATCATTGAGAGTAGAAAGTGGTAAGTATCAAACAGGGTGATGCATACGAGTACATCTAAATTTCTGATGTGCTCTGAGTACCATAAGCTCATGTTCCGTTCCTAACTTGCACTTTCTTGTTCAGGGGTTTCACCAAGTTCAGCCGCGATGAATACGTCAGGCTTAAGAGCGAGGGTAGAATCATGCCTGATGGTGTCAATGCTAAGGTAAACACGCTGTTTCTAAACTAATGCTTATCTTGGGTCCTATCAGGATGAGTAACTTATTTTGTTAAAATCCTTTTTCGCTTTGCTTTTATGACCTGTCAATTGCTATTGTAATTGTTCTCGTATGCATCGTTGCGGATAATCTAATCTTTGTCAATACTGTCTCTATGGTGCAGCTACTTGGTTGCCATGGTCGCCTCTCTGCTCGTGCCCCCGGGAAGGCCTTCCTCTCAGCCGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019248