Os11g0692300

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Revision as of 09:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0692300| Description = Similar to Bacterial blight resistance protein| Version = NM_001075030.2 GI:297612424 GeneID:4351164| Length = 3751 ...")
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Gene Name

Os11g0692300

Description

Similar to Bacterial blight resistance protein

Version

NM_001075030.2 GI:297612424 GeneID:4351164

Length

3751 bp

Definition

Oryza sativa Japonica Group Os11g0692300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:30088302..30092052

Sequence Coding Region

30088302..30088524,30088538..30090412,30090703..30090814,30090833..30091377,30091552..30091838
,30092017..30092052

Expression

GEO Profiles:Os11g0692300

Genome Context

<gbrowseImage1> name=NC_008404:30088302..30092052 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:30088302..30092052 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcttgttcgattgccagtatggattttcgttgcggcgttgttaatcgcttcgtccagtactgtgccttgtgctccctctctaggtccgatcgccagcaagagtaacggcagcgacaccgacctcgctgcattgctggccttcaaagcccagctctccgatcctaacaacatccttgccggcaattggaccaccggaacgccgttctgccggcgggtggcagccaccgccgccggcggcagcgcgtcaccgctccaaggagaactcagctctcaccttggtaacatttcttttctcttcatcctcaacctcaccaacaccggcctcgctggctcggtgccgaacgaaataggaaggctgcatcgcctcgagctccttgatcttggccacaatgccatgtctggtggcatcccaatcgccatagggaacctcacgaggcttcagctacttaatctacagtttaaccagctatacggtccaatcccagcagagctgcaggggttgcacagtcttggcagcatgaatctccgtcacaattacctcactggatcgattccggacgatctgttcaacaacacgcctttgctaacttatctcaacgttggtaacaatagcctgtcaggactgataccgggttgcatcggttccttgccaatcctccaacaccttaactttcaggccaataacttaactggggcggtgccaccagccatcttcaacatgtctaaattaagtaccatttctcttatatcgaatggtttaactggccctatccctggtaatacaagtttcagcctcccagttctacgatggttcgccatcagtaaaaacaatttctttggtcagattccactggggctcgcagcgtgtccatacctccaagttattgccatgccttataatttattcgagggtgttttgccaccatggctgggcaggttgaccaatcttgatgccatctccttgggtgggaataactttgatgctggccccatccctactgaacttagcaacctcaccatgctgacagtcttagatttgacgacgtgcaacctaacaggaaacatccctgcagatattgggcacctaggccaactttcatggttgcatcttgcgatgaatcaactaacaggacctattcctgcttctcttggcaacctttcatcgttggcaatcctgctactgaaaggaaacttgctggatggatcattaccatcgacagttgatagcatgaactcactaacggcagttgatgttactgaaaacaatctacacggggatctcaacttcctttctactgtttccaattgtaggaagctttctaccctccaaatggacctgaattatatcaccggaatcctcccagactatgttgggaacctgtcgtcacagctgaaatggttcacgttatctaacaacaagttaactggcacgcttccagctaccatttcaaatttaactgctcttgaggtgatagatctttcacataaccaactgcgcaatgcaattccagaatcaatcatgacgattgagaatctccaatggcttgacctaagtggaaatagcttgtctggcttcatcccatcgaatactgcacttctaaggaacattgtaaaactgttccttgaaagcaacgaaatttctggctccataccaaaggacatgaggaacctcactaatctagagcaccttctattgtctgataacaaattaacgtcaactataccaccaagcttatttcatcttgataaaatcgtcaggctagatctttctcgaaacttcttgagtggtgcactgccggttgatgtagggtatttgaagcaaattaccatcatggatctctctgacaaccacttttctggtagaatcccatattcgataggacaacttcagatgttaacacacctgaatctatcagctaacggattctatgattctgttccagactcttttggtaatttaactggcttgcaaactttggacatatcccataacagtatttctggtaccatcccaaactacttggctaattttacgacccttgttagcttgaacctatctttcaacaaactacatggtcaaataccggaaggagccgaaaggttcggtcgaccaatttcattaagaaatgaagggtacaatacaattaaagagcttacaacgacagtatgctgtcgaaaacagattggggcaaaagccctgacccgattgcaagagcttcttcgtgcaaccgatgatttcagcgatgatagcatgttgggcttcggaagctttggaaaagtttttaggggacgattgagcaacggtatggtggttgccataaaagttatacaccagcatctggaacatgccatgagaagctttgacaccgagtgtcgtgtgctccgaatggctcgacatcgcaacctgataaagattctgaacacttgttccaacctggactttaaagcactggtacttcagtacatgcccaagggtagcttagaagcactcctgcactcagaacaagggaagcaattaggctttctcgagaggttggatattatgctagatgtgtcaatggcaatggaatacctgcatcatgagcactatgaggtggtcttacactgcgatttgaagcctagcaacgtactatttgacgatgatatgacggcacatgtggcagactttggtattgcaaggttgttgttaggtgatgacaactccatgatctcagctagcatgccaggaacagttgggtacatggcaccagtgttcactgcgaagagacccacagatgctatgtttgtgggagaactgaacatcaggcagtgggttcaacaggcgtttcctgcagagcttgtccatgtggtggactgcaaacttctacaggatggctcttcttcttcttcaagtaacatgcatgacttccttgtgccagtgttcgagctgggcttgctctgttcggctgactcccccgagcaaaggatggcgatgagcgatgtggtcgtgacactgaacaagattagaaaggactatgtcaaattgatggcaaccacagttctgcaacaatttatagttggtgtaaaaatgtga</cdnaseq>

Protein Sequence

<aaseq>MALVRLPVWIFVAALLIASSSTVPCAPSLGPIASKSNGSDTDLA ALLAFKAQLSDPNNILAGNWTTGTPFCRRVAATAAGGSASPLQGELSSHLGNISFLFI LNLTNTGLAGSVPNEIGRLHRLELLDLGHNAMSGGIPIAIGNLTRLQLLNLQFNQLYG PIPAELQGLHSLGSMNLRHNYLTGSIPDDLFNNTPLLTYLNVGNNSLSGLIPGCIGSL PILQHLNFQANNLTGAVPPAIFNMSKLSTISLISNGLTGPIPGNTSFSLPVLRWFAIS KNNFFGQIPLGLAACPYLQVIAMPYNLFEGVLPPWLGRLTNLDAISLGGNNFDAGPIP TELSNLTMLTVLDLTTCNLTGNIPADIGHLGQLSWLHLAMNQLTGPIPASLGNLSSLA ILLLKGNLLDGSLPSTVDSMNSLTAVDVTENNLHGDLNFLSTVSNCRKLSTLQMDLNY ITGILPDYVGNLSSQLKWFTLSNNKLTGTLPATISNLTALEVIDLSHNQLRNAIPESI MTIENLQWLDLSGNSLSGFIPSNTALLRNIVKLFLESNEISGSIPKDMRNLTNLEHLL LSDNKLTSTIPPSLFHLDKIVRLDLSRNFLSGALPVDVGYLKQITIMDLSDNHFSGRI PYSIGQLQMLTHLNLSANGFYDSVPDSFGNLTGLQTLDISHNSISGTIPNYLANFTTL VSLNLSFNKLHGQIPEGAERFGRPISLRNEGYNTIKELTTTVCCRKQIGAKALTRLQE LLRATDDFSDDSMLGFGSFGKVFRGRLSNGMVVAIKVIHQHLEHAMRSFDTECRVLRM ARHRNLIKILNTCSNLDFKALVLQYMPKGSLEALLHSEQGKQLGFLERLDIMLDVSMA MEYLHHEHYEVVLHCDLKPSNVLFDDDMTAHVADFGIARLLLGDDNSMISASMPGTVG YMAPVFTAKRPTDAMFVGELNIRQWVQQAFPAELVHVVDCKLLQDGSSSSSSNMHDFL VPVFELGLLCSADSPEQRMAMSDVVVTLNKIRKDYVKLMATTVLQQFIVGVKM</aaseq>

Gene Sequence

<dnaseqindica>1..223#237..2111#2402..2513#2532..3076#3251..3537#3716..3751#atggctcttgttcgattgccagtatggattttcgttgcggcgttgttaatcgcttcgtccagtactgtgccttgtgctccctctctaggtccgatcgccagcaagagtaacggcagcgacaccgacctcgctgcattgctggccttcaaagcccagctctccgatcctaacaacatccttgccggcaattggaccaccggaacgccgttctgccggcgggtgggtgtctcgtgcagcagccaccgccgccggcggcagcgcgtcaccgctccaaggagaactcagctctcaccttggtaacatttcttttctcttcatcctcaacctcaccaacaccggcctcgctggctcggtgccgaacgaaataggaaggctgcatcgcctcgagctccttgatcttggccacaatgccatgtctggtggcatcccaatcgccatagggaacctcacgaggcttcagctacttaatctacagtttaaccagctatacggtccaatcccagcagagctgcaggggttgcacagtcttggcagcatgaatctccgtcacaattacctcactggatcgattccggacgatctgttcaacaacacgcctttgctaacttatctcaacgttggtaacaatagcctgtcaggactgataccgggttgcatcggttccttgccaatcctccaacaccttaactttcaggccaataacttaactggggcggtgccaccagccatcttcaacatgtctaaattaagtaccatttctcttatatcgaatggtttaactggccctatccctggtaatacaagtttcagcctcccagttctacgatggttcgccatcagtaaaaacaatttctttggtcagattccactggggctcgcagcgtgtccatacctccaagttattgccatgccttataatttattcgagggtgttttgccaccatggctgggcaggttgaccaatcttgatgccatctccttgggtgggaataactttgatgctggccccatccctactgaacttagcaacctcaccatgctgacagtcttagatttgacgacgtgcaacctaacaggaaacatccctgcagatattgggcacctaggccaactttcatggttgcatcttgcgatgaatcaactaacaggacctattcctgcttctcttggcaacctttcatcgttggcaatcctgctactgaaaggaaacttgctggatggatcattaccatcgacagttgatagcatgaactcactaacggcagttgatgttactgaaaacaatctacacggggatctcaacttcctttctactgtttccaattgtaggaagctttctaccctccaaatggacctgaattatatcaccggaatcctcccagactatgttgggaacctgtcgtcacagctgaaatggttcacgttatctaacaacaagttaactggcacgcttccagctaccatttcaaatttaactgctcttgaggtgatagatctttcacataaccaactgcgcaatgcaattccagaatcaatcatgacgattgagaatctccaatggcttgacctaagtggaaatagcttgtctggcttcatcccatcgaatactgcacttctaaggaacattgtaaaactgttccttgaaagcaacgaaatttctggctccataccaaaggacatgaggaacctcactaatctagagcaccttctattgtctgataacaaattaacgtcaactataccaccaagcttatttcatcttgataaaatcgtcaggctagatctttctcgaaacttcttgagtggtgcactgccggttgatgtagggtatttgaagcaaattaccatcatggatctctctgacaaccacttttctggtagaatcccatattcgataggacaacttcagatgttaacacacctgaatctatcagctaacggattctatgattctgttccagactcttttggtaatttaactggcttgcaaactttggacatatcccataacagtatttctggtaccatcccaaactacttggctaattttacgacccttgttagcttgaacctatctttcaacaaactacatggtcaaataccggaaggaggtgtctttgcaaacatcactttacaatacttggaaggaaactcagggctatgtggtgctgcccgtttaggattcccaccatgccaaaccacctcccccaacagaaataatggtcacatgctaaaatatttgctacctactataatcatagtagttggaattgtagcttgttgcctgtatgtagtgattagaaagaaagctaaccatcaaaatacttctgctggtaaggctgaccttatcagccatcaattgctctcctagcatgagctttttttttttttgccgggtcagccgaaaggttcggtcgaccaatttcattaagaaatgaagggtacaatacaattaaagagcttacaacgacagtatgctgtcgaaaacagattggggcaaaagccctgacccggtaagctataatcaacagattgcaagagcttcttcgtgcaaccgatgatttcagcgatgatagcatgttgggcttcggaagctttggaaaagtttttaggggacgattgagcaacggtatggtggttgccataaaagttatacaccagcatctggaacatgccatgagaagctttgacaccgagtgtcgtgtgctccgaatggctcgacatcgcaacctgataaagattctgaacacttgttccaacctggactttaaagcactggtacttcagtacatgcccaagggtagcttagaagcactcctgcactcagaacaagggaagcaattaggctttctcgagaggttggatattatgctagatgtgtcaatggcaatggaatacctgcatcatgagcactatgaggtggtcttacactgcgatttgaagcctagcaacgtactatttgacgatgatatgacggcacatgtggcagactttggtattgcaaggttgttgttaggtgatgacaactccatgatctcagctagcatgccaggaacagttgggtacatggcaccaggtacttaatagtttttcttgtctttctcaaactttgcccgatcttttattattattgagtagatagggtgcaactaatttttggtgtctaatttttcttgagcagagtaagggactctaggaaaagcatcacggaagagtgatgtgttcagttacggcatcatgctgcttgaagtgttcactgcgaagagacccacagatgctatgtttgtgggagaactgaacatcaggcagtgggttcaacaggcgtttcctgcagagcttgtccatgtggtggactgcaaacttctacaggatggctcttcttcttcttcaagtaacatgcatgacttccttgtgccagtgttcgagctgggcttgctctgttcggctgactcccccgagcaaaggatggcgatgagcgatgtggtcgtgacactgaacaagattagaaaggactatgtcaaattgatggcaaccacagtgagcgttgtgcagcagtgattcatcgctctctcgtggtatatgagcgaatgaaatatatatatcctttgcatccatttcttctgtattaggaatagcatcagtgtatacccagtgatcaattaccctttgcttctatgtgtttacggttgaattgaatatatctatggtgcttcaggttctgcaacaatttatagttggtgtaaaaatgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0692300, RefSeq:Os11g0692300