BGIOSGA019272

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Revision as of 02:48, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019272| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019272, complete gene.| tag = OsJ_173...")
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Gene Name

BGIOSGA019272

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019272, complete gene.

LocusTag

OsJ_17330

Ensembl Transcript ID

BGIOSGA019272-TA

Ensembl Protein ID

BGIOSGA019272-PA

Length

2548

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4956849..4959396

Sequence Coding Region

4956849..4957136,4957539..4957619,4957894..4957965,4958533..4959396

Genome Context

<gbrowseImage1> name=IndicaChromosome05:4956849..4959396 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:4956849..4959396 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATACAAACTTCAGGGAAGCCCATTGATCTGCTGATGGAGAAGGTTCTTTGTATGAACATTATGTCTTCTGATTACTTCAAGGAGCTCTACAGGCTGAAGACCTATCATGAGGTCATTGATGAAATATACAATCAAGTTGATCATGTGGAGCCTTGGATGACTGGCAATTGCAGGGGCCCCTCCACTGCATTCTGTCTCCTCTACAAGTTCTTCACCATGAAGCTTACTGTCAAACAGATGCATGGTTTGTTGAAGCATCCTGATTCCCCATACATTAGAGCTATAGGGTTCTTGTATCTTCGATATGTTGCAGATCCGAAGATCTTGTGGACGTGGTATGAGCCCTACTTGAAGGATGATGAGGAATTCTCCCCTGGATCTAATGGTCGCATGACAACCATGGGTGTTTATGTGCGTGATCTTATACTTGGACAGTACTACTTCGATAGTCTTCTTCCAAGAGTTCCTCTTCCAGTAATTCGTCAAGTGACATCCAATCTTGAGAAGATGAAGTTGCCCACTAAGCTTTCTGGGATTACTGGAGAGTCTAATCGTCATGGATCAGAAGATACTGCCCGCCGGCCTCCTTCCGTGAAGGCTTCTCTGTCAGTTTCCTTTGGACAGCGTGCTCCGCATCGTGCATCCACACGGGAGTCATCTCCAGTTCGGAGGACAGTCACCCATGATGGCCATCGTAAATCTTCCTCACCATCTCGCCGTAGCGGAAGCCGCGAGGTTCCTGATCGTGATCGATCAAGCCGTGACCGTTCTAGTCGTGACTATGACCGTTCAAGCCATGACCGTGATCGTGACCATTCCAGTCGTGACTATGACCGTTCAAGCCATGACCGTGACCGTGATCGTGACCGTTCCAGTCGTGACTATGACCGTTCAAGTCGTGACCGGGATCATGATAGAGACATCAGAGACTATCATCGGCGTGATCGTGACAGCAGGGACCGTGACTACAGGTCTAGGCATTCATCCGAAAGACAAGATGACCGAAGGGACCGTGACCGTGAGGGTAGCAGGCACAGACGGTCCAGCTCTCGGCACAGAAGCAGAAGCCGCAGCCGCAGCCGCAGCCGCAGCAGAAGCAGGAGCCGCAGCAGAAATGAGGAGAGATCCAGTCCTTTTGGCAATGCAGGCAAAGAAAAGACTGCTGCCATCTCGAGCAACCTAGCAAAGCTCAAGGACTTGTATGGTGATGTAACTGAGAAGAAGGACGACGGTGAAGCCCCTCGCCGTGATTCGTGCGCGGAGGAGGTTATCAGGTTGGGTGGCCCGAGATGGAGATAG</cdnaseq>

Protein Sequence

<aaseq>MEIQTSGKPIDLLMEKVLCMNIMSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADPKILWTWYEPYLKDDEEFSPGSNGRMTTMGVYVRDLILGQYYFDSLLPRVPLPVIRQVTSNLEKMKLPTKLSGITGESNRHGSEDTARRPPSVKASLSVSFGQRAPHRASTRESSPVRRTVTHDGHRKSSSPSRRSGSREVPDRDRSSRDRSSRDYDRSSHDRDRDHSSRDYDRSSHDRDRDRDRSSRDYDRSSRDRDHDRDIRDYHRRDRDSRDRDYRSRHSSERQDDRRDRDREGSRHRRSSSRHRSRSRSRSRSRSRSRSRSRNEERSSPFGNAGKEKTAAISSNLAKLKDLYGDVTEKKDDGEAPRRDSCAEEVIRLGGPRWR</aaseq>

Gene Sequence

<dnaseqindica>1..288#691..771#1046..1117#1685..2548#ATGGAGATACAAACTTCAGGGAAGCCCATTGATCTGCTGATGGAGAAGGTTCTTTGTATGAACATTATGTCTTCTGATTACTTCAAGGAGCTCTACAGGCTGAAGACCTATCATGAGGTCATTGATGAAATATACAATCAAGTTGATCATGTGGAGCCTTGGATGACTGGCAATTGCAGGGGCCCCTCCACTGCATTCTGTCTCCTCTACAAGTTCTTCACCATGAAGCTTACTGTCAAACAGATGCATGGTTTGTTGAAGCATCCTGATTCCCCATACATTAGAGCTGTAAGTTCTTTGCCCCTATTAACTTTTATCACACTTTATTAGATTTAAGATTAATGCATGCTTTCTGTTGTTTATCAAGTTTTATTGGAGTGCAATGATAAACTAAGATTTTCAGTATAATTGGTGTGTACAAACAATCCAAATTTATTTCCTTCAAATTATAGTTCTAACACATAATATCTATTTCTACATTTTGGTTATATCCACTAACAGTCCTATGACTTGCTTCGTTGGATGGCCTTGTGTATTGGTTTTGGTCCTAGGACACGTGGATGACAAAGTTTCCAAGCAGTTCATAGTGTTCCAGTCTGTTCATTGGAGTTGTGAGCATTTTTTGTCTTTATTTATTCTGTTGATGAATATGATGCTTTCAGTAAATAACCAACCGGTGTTGTGTTGCAGATAGGGTTCTTGTATCTTCGATATGTTGCAGATCCGAAGATCTTGTGGACGTGGTATGAGCCCTACTTGAAGGATGATGAGGTATTGACATTTTCTTACATCTATGTATTTATATATAACATCTGCCTTTTGATAATATGTGGACCTCCAGTTACATAAGAGGAGAAATCATTAGAGAGCTTTTTGACTCACTAGTAACTTTGCCAAGTATGATGCCCTAAAATGGGCACTTGAAAAATATTGAAACATAAACCATGCAATAAGAAGTAATCATTGTGCCACCTTTTACTCTGTCTAGTCCATATGATTACATCAGATATGAGTTGCTTTTATTTAAATTTATGTTCTCATGCAGGAATTCTCCCCTGGATCTAATGGTCGCATGACAACCATGGGTGTTTATGTGCGTGATCTTATACTTGGACAGGTCTGCCTATTCATTCTTTGTGCTTTCAGTATAGAAATAACCAATAAACACACTTTTTCTCTTACAAATTAACAGTTGTTGTGCTAAAGTATCTTTTAAATGAATAACACTAGCAGATTAAAAAGAAAGTTTCTGCTTTTTGATGACTAGTGTGCTGTGCTATGATGACTTGATTCACATACGCACTCGATCACTACACATTATTAAAATAATCTCCATGTTATGGTGATTCACATAAGTTCATTTCATTTGTTCAAATGTTTGTGAACATTTTTTAAATCTAATTCTATTTGGTGTATGTTCAGAAACTTTGCCAACTAACTGGACATTCTTGGCCAGGCAAGTCGTAGTTCCACAACATAGCTTGTTAGTAGTTTTTAATCTCCTTACTTCCCCCCAGATTGGTAGTACTCCATAAATTTGCTTTAAGCTTTGTTGCTTGCTGATTTTCATTATCCATTTATCAGAAATGAATTGAATCCTCTGACTGCAAATTTTGACTAGCAACTATTTCCGATGCTCTTTCTTATAATTGATTAACCTGCTGTTTGTCTTTTCTTGGTGTAGTACTACTTCGATAGTCTTCTTCCAAGAGTTCCTCTTCCAGTAATTCGTCAAGTGACATCCAATCTTGAGAAGATGAAGTTGCCCACTAAGCTTTCTGGGATTACTGGAGAGTCTAATCGTCATGGATCAGAAGATACTGCCCGCCGGCCTCCTTCCGTGAAGGCTTCTCTGTCAGTTTCCTTTGGACAGCGTGCTCCGCATCGTGCATCCACACGGGAGTCATCTCCAGTTCGGAGGACAGTCACCCATGATGGCCATCGTAAATCTTCCTCACCATCTCGCCGTAGCGGAAGCCGCGAGGTTCCTGATCGTGATCGATCAAGCCGTGACCGTTCTAGTCGTGACTATGACCGTTCAAGCCATGACCGTGATCGTGACCATTCCAGTCGTGACTATGACCGTTCAAGCCATGACCGTGACCGTGATCGTGACCGTTCCAGTCGTGACTATGACCGTTCAAGTCGTGACCGGGATCATGATAGAGACATCAGAGACTATCATCGGCGTGATCGTGACAGCAGGGACCGTGACTACAGGTCTAGGCATTCATCCGAAAGACAAGATGACCGAAGGGACCGTGACCGTGAGGGTAGCAGGCACAGACGGTCCAGCTCTCGGCACAGAAGCAGAAGCCGCAGCCGCAGCCGCAGCCGCAGCAGAAGCAGGAGCCGCAGCAGAAATGAGGAGAGATCCAGTCCTTTTGGCAATGCAGGCAAAGAAAAGACTGCTGCCATCTCGAGCAACCTAGCAAAGCTCAAGGACTTGTATGGTGATGTAACTGAGAAGAAGGACGACGGTGAAGCCCCTCGCCGTGATTCGTGCGCGGAGGAGGTTATCAGGTTGGGTGGCCCGAGATGGAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019272