BGIOSGA019288

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Revision as of 02:49, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019288| Description = BGIOSGA019288| Definition = Oryza sativa Indica Group BGIOSGA019288, complete gene.| tag = | tid = BGIOSGA019288-TA|...")
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Gene Name

BGIOSGA019288

Description

BGIOSGA019288

Definition

Oryza sativa Indica Group BGIOSGA019288, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA019288-TA

Ensembl Protein ID

BGIOSGA019288-PA

Length

1335

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5303477..5304811

Sequence Coding Region

5303477..5304369,5304754..5304811

Genome Context

<gbrowseImage1> name=IndicaChromosome05:5303477..5304811 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:5303477..5304811 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTGACAGGGAAGCTGGGCAGCCTCCTCGCGCAGGAGTACACCCTGATCGCCGGCGTCCGCGACGACATCCAGTACATCAACGACGAGCTCGCCAGCATGCAGGCCTTCCTCAGCAAGCTCAAGCGACGGGACGTCGACCACGACGAGCAGCGTCAGGACTGGATGAAGCAGGTGCGGGAGGTGGCCTACGACATCAAGGACTGCGTCGACGATGTCGGCCACCGCCTCGGCCGCGAGCCGCGGGGGAGCGGCGCGGCCATCTCCTTCCAAAGGGCGTGGTACCTTCTCACCACCCTCTACAAGCGCCGCCGCATCGCAGCCGAGATCGGCAACCTCAAGCTCCGGGCGCAGCATGTCAGCGAGCGCCGCACCAGGTACGGGGTGGAGAACCTCGAGGGCAATGGTGGTGGTGGCGGCAGCGGCAGCGGCCTCGGCGTCGGAGCCAACGCTCCTAGAGACCGTCTAGCTCCTCTTCCCCGGCTGATTGGCACCATGGAGCCTGTAGGAATGGATGCTGCCATTGATGAGCTCCAGGAGTGGTTTTCCAAAGGGAAGGATGGCACCCAGCAGAGGTACCTCGCCATTGTCGGGTTCGGTGGCCTTGGCAAGACCACGCTCGCCATGGCGTTGTACCGCAAGCTTGGGGACGAATTCGATTGCCGAGCATTCGTGCTCGCGTCGCAGAAGTTCCATCTCCCGACGGTTCTGAGGAGCCTTGTCAAGCAGTTCCATGAGAAGCAGGCAGACGCTTCTGAGGATACCCTCCATGGAATTGAGGGTTGGGGTGATGAAATGCTGAAGAAGAAGCTGCTTGAACAATTAACAGGCAAGAGAAAAGCTCATCAAGAAGGGGAGAGGGTAACCCTCGACAGTGCCCCAAAGAGGTTATGA</cdnaseq>

Protein Sequence

<aaseq>MHAXXXXXXXXXXXXXXXXXLTGKLGSLLAQEYTLIAGVRDDIQYINDELASMQAFLSKLKRRDVDHDEQRQDWMKQVREVAYDIKDCVDDVGHRLGREPRGSGAAISFQRAWYLLTTLYKRRRIAAEIGNLKLRAQHVSERRTRYGVENLEGNGGGGGSGSGLGVGANAPRDRLAPLPRLIGTMEPVGMDAAIDELQEWFSKGKDGTQQRYLAIVGFGGLGKTTLAMALYRKLGDEFDCRAFVLASQKFHLPTVLRSLVKQFHEKQADASEDTLHGIEGWGDEMLKKKLLEQLTGKRKAHQEGERVTLDSAPKRL</aaseq>

Gene Sequence

<dnaseqindica>1..893#1278..1335#ATGCATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTGACAGGGAAGCTGGGCAGCCTCCTCGCGCAGGAGTACACCCTGATCGCCGGCGTCCGCGACGACATCCAGTACATCAACGACGAGCTCGCCAGCATGCAGGCCTTCCTCAGCAAGCTCAAGCGACGGGACGTCGACCACGACGAGCAGCGTCAGGACTGGATGAAGCAGGTGCGGGAGGTGGCCTACGACATCAAGGACTGCGTCGACGATGTCGGCCACCGCCTCGGCCGCGAGCCGCGGGGGAGCGGCGCGGCCATCTCCTTCCAAAGGGCGTGGTACCTTCTCACCACCCTCTACAAGCGCCGCCGCATCGCAGCCGAGATCGGCAACCTCAAGCTCCGGGCGCAGCATGTCAGCGAGCGCCGCACCAGGTACGGGGTGGAGAACCTCGAGGGCAATGGTGGTGGTGGCGGCAGCGGCAGCGGCCTCGGCGTCGGAGCCAACGCTCCTAGAGACCGTCTAGCTCCTCTTCCCCGGCTGATTGGCACCATGGAGCCTGTAGGAATGGATGCTGCCATTGATGAGCTCCAGGAGTGGTTTTCCAAAGGGAAGGATGGCACCCAGCAGAGGTACCTCGCCATTGTCGGGTTCGGTGGCCTTGGCAAGACCACGCTCGCCATGGCGTTGTACCGCAAGCTTGGGGACGAATTCGATTGCCGAGCATTCGTGCTCGCGTCGCAGAAGTTCCATCTCCCGACGGTTCTGAGGAGCCTTGTCAAGCAGTTCCATGAGAAGCAGGCAGACGCTTCTGAGGATACCCTCCATGGAATTGAGGGTTGGGGTGATGAAATGCTGAAGAAGAAGCTGCTTGAACAATTAACAGGCAAGAGGTATGATTTTGGGATTGCTAATATCTATCTCTTCACCACATTTTTATTGTACTGTCTTACTAGTCATCACTCCGTGCGTTTGCATACTCGGAAAACCTCCAAATTATTGTATATAAAGATATTTTTTTTTCGCTGAGAAGACCGAAGGAGGCCATCCGAATGTATTAAGAAGAAATAAAAGTTACAAGAAAAAACACCACAATGCACCAAGGTGCATGACCACACACCAACGCACTACCACCTAAGCACAAACCACTGAGAGTGAACGCCGCTAGGCATACGGCAACACCACAGAGACGAGACTCCGAAAACGATGCCACCAAGATGGTCACAACATCTAGAATGTCACCACTGCCCATCTAAAAAGATGTGGTTTTCTCCCAGAAAAGCTCATCAAGAAGGGGAGAGGGTAACCCTCGACAGTGCCCCAAAGAGGTTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019288