BGIOSGA019363

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Revision as of 02:50, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019363| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019363, complete gene.| tag = OJ1008_...")
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Gene Name

BGIOSGA019363

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019363, complete gene.

LocusTag

OJ1008_D08.7

Ensembl Transcript ID

BGIOSGA019363-TA

Ensembl Protein ID

BGIOSGA019363-PA

Length

3499

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7146278..7149776

Sequence Coding Region

7146278..7146539,7146638..7147014,7147119..7147425,7149550..7149776

Genome Context

<gbrowseImage1> name=IndicaChromosome05:7146278..7149776 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:7146278..7149776 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAATCCGCTGCTGACGGCCGCCGCCGCCGTCGTCTTGTGCTTCCTCCTCCATGGCGCGGCTGTCTCCGGCGACCGGCCGTTCCCTCCACGGTTCACCTCCATCTTCAGCTTCGGGAGCTCCTACTCCGACACCGGCAACTTCGTCCTCCAGTCCGCCGGCCTCCCGTCCATCCCCTTCAACCACTCCCCCTACGGCGACACCTTCTTCCGCCGCCCCACCGGCCGCCCCTCCGACGGCCGCCTCCCCATCGACTTCATCGCGGAAGCGCTAGGGCTCCCACTCGTGCCGCCGTTCCTGGCGAAGGAGGCGAACGACTTCGGCGGCGGCGGTGGCGCCAACTTCGCCATCGTCGGCGGCACGGCGCTGGACGTCGGGTTCTTCATCCGGCACAACAACGCGAGCGTGCCGCCGTTCCAGAGCTCCCTCCGCGTGCAGATCGGGTGGTTCCGGAGCCTCCTGAGGCGCGGCGGCAACGCCACCGCGGCCGCCGCGGCGGAGCGCCTCGCGACGGCGCTGTTCGTCGTCGGCGAGTTCGGCGGCAGCGACTACAGGTACCTCCTCTCCGGCGGCAAGAGCCTCGAGCAGGCCAAGTCCTTCGTGCCGGAGGTCGTGCGAGCCATCTGCCGAGGCGTCGAGAGGTTAGTGGAGGAAGGAGCGCGGTACGTGGTGGTGACGGGGACGCTGCCGGCGGGGTGCATGCCGATGGAGCTGACCAAGTACGCGGCGGCCGCGGCGGGGGCGGCGAACGCGTCATCGACGGCGGCGGCGGCGTACGATCGCCGGACGGGGTGCCTCCGGCGGCTCAACGGGCTGGCTCAGTACCACAACTGGGTGCTCCGGGAGGCCGTGGAGCGCATGCGCGGCAAGTACCCGACAACGAAGCTCGTCTACGCCGACTTCTACAAGCCGGTGGCGAGCCTCGTCCGGCGACCGGCCAAGTTCGGTTTCACGCAGCAACCACTGAAAGCTTGCTGCGGCGGGGGCGGGCCGTACAACTACAACCCTGGAGCGGCGTGCGGCTCACCGGGCGCGTCAACCTGCGGCGACCCGTCGGCCTACGTCAACTGGGACGGCATCCATCTCACCGAGGCCGCATACAAGTACGTCGCCGGCGGCTGGCTCAACGGCGTCTACGCTTACCCGTCCATTCTTAGCCTCCTGGCCCAATAA</cdnaseq>

Protein Sequence

<aaseq>MNPLLTAAAAVVLCFLLHGAAVSGDRPFPPRFTSIFSFGSSYSDTGNFVLQSAGLPSIPFNHSPYGDTFFRRPTGRPSDGRLPIDFIAEALGLPLVPPFLAKEANDFGGGGGANFAIVGGTALDVGFFIRHNNASVPPFQSSLRVQIGWFRSLLRRGGNATAAAAAERLATALFVVGEFGGSDYRYLLSGGKSLEQAKSFVPEVVRAICRGVERLVEEGARYVVVTGTLPAGCMPMELTKYAAAAAGAANASSTAAAAYDRRTGCLRRLNGLAQYHNWVLREAVERMRGKYPTTKLVYADFYKPVASLVRRPAKFGFTQQPLKACCGGGGPYNYNPGAACGSPGASTCGDPSAYVNWDGIHLTEAAYKYVAGGWLNGVYAYPSILSLLAQ</aaseq>

Gene Sequence

<dnaseqindica>1..262#361..737#842..1148#3273..3499#ATGAATCCGCTGCTGACGGCCGCCGCCGCCGTCGTCTTGTGCTTCCTCCTCCATGGCGCGGCTGTCTCCGGCGACCGGCCGTTCCCTCCACGGTTCACCTCCATCTTCAGCTTCGGGAGCTCCTACTCCGACACCGGCAACTTCGTCCTCCAGTCCGCCGGCCTCCCGTCCATCCCCTTCAACCACTCCCCCTACGGCGACACCTTCTTCCGCCGCCCCACCGGCCGCCCCTCCGACGGCCGCCTCCCCATCGACTTCATCGGTACGTGTTCCACGCAGTCGCCGATGCCGTCGCCGCCGTTCTTGATTAATTTCTCGTTGCTGTGTGATTGATGCTGTTTTGGCAATGGCGCGCGGCAGCGGAAGCGCTAGGGCTCCCACTCGTGCCGCCGTTCCTGGCGAAGGAGGCGAACGACTTCGGCGGCGGCGGTGGCGCCAACTTCGCCATCGTCGGCGGCACGGCGCTGGACGTCGGGTTCTTCATCCGGCACAACAACGCGAGCGTGCCGCCGTTCCAGAGCTCCCTCCGCGTGCAGATCGGGTGGTTCCGGAGCCTCCTGAGGCGCGGCGGCAACGCCACCGCGGCCGCCGCGGCGGAGCGCCTCGCGACGGCGCTGTTCGTCGTCGGCGAGTTCGGCGGCAGCGACTACAGGTACCTCCTCTCCGGCGGCAAGAGCCTCGAGCAGGCCAAGTCCTTCGTGCCGGAGGTCGTGCGAGCCATCTGCCGAGGCGTCGAGGTAACTAAAACAGAAAAAACACAAACACCATTGCCCAATGTCCATTGCATTTTTGCTCGCATGTGTCGCCGCCGGCGCCGACGAAGACGACGATGTGTGTGCAGAGGTTAGTGGAGGAAGGAGCGCGGTACGTGGTGGTGACGGGGACGCTGCCGGCGGGGTGCATGCCGATGGAGCTGACCAAGTACGCGGCGGCCGCGGCGGGGGCGGCGAACGCGTCATCGACGGCGGCGGCGGCGTACGATCGCCGGACGGGGTGCCTCCGGCGGCTCAACGGGCTGGCTCAGTACCACAACTGGGTGCTCCGGGAGGCCGTGGAGCGCATGCGCGGCAAGTACCCGACAACGAAGCTCGTCTACGCCGACTTCTACAAGCCGGTGGCGAGCCTCGTCCGGCGACCGGCCAAGTTCGGTGAGTCGCCGAGAATTTTTTTTCCTGCTTTAATTACCATTCATTTTATATCATAAGTCGTTTGATTTTTTTTCTTTAAGTTTGACCAAATTTATAGAAAAATATACTAACATTTTTAATACAAAATAAACATATTATCAAAATATATTCAATGTTGAATTTATTAAACCTAATTTAGTGTTGTAAATATTGCTAATTTTTTCTATAAATTTGGTCAGATCTAAAAAATTTTCAATAAGAAAAATATCGAACGACTTATAATATGAAGCGGATGGAGTATTTTCTACCGGAAGGAAAAACGAAAAAGAAAATTGTAATTATTTGCTTCGAGTACATATCGGACGGACTGACATGGTTACACCCACACACATATGGACATATCCTAGCTAGCACAACTCTAAAGAGATCGAAGGCCTAACATCATATAGCGGGTACATACTTTGTCAAGCCCGGGTTCAAATTATTGTTTCGGTATTTGCATCGGGTATTGGAAATTTTGGTTATTTTGGCCCAAAATAATTTGAACTTTTAACAAAATTTTAACAAATTTGACCAAATCAGAAAAAAATCTAAAATACTTCCCTCAAAACAATTTCAAAAATTTCAGTCAGGAATTTTAAACCACGGTCAACCCTACTACCTGAACTTGAATTGGGTCGTTGGATTGTACCACGGGTAATCTGATTAGCTGAGCTCGAAAAACAAATCCTAATAGGCTCAAATTTTGATGAATTATATTTGATTTTCTCTTTTATAGATCATCGACATCGATCAGCCATCGTCGTAGCTAGCTCATAAATGCGAGTGTGCGACAGTAGCCATGTACACACGTAAAGATATATAATGCATTAGTGAAGTCAAATTGGTTGATGAAACCTAAAGCGATAGAACAATTAACTGCGCTAGCTTGACTACTTAGCACTTCCAAGAGCTTTGCAACTCACGAAATTTTAGAATCTTTAGGTGCGTTGAGCCATGAACTATGTCGGGAAGGCAATGCCGAAGAAGCTACAAGATTATTCTGGCTTGTGGATCGAGAAACTAGCTACAAAGTCTAAAATCACAGTATCTTTTTATGAAAACAATCTGGCATGCAGCTGTAATTTTGTTGGGTATCACACAAAATAATCTACCAGCCAGCTTGGGTCAACTCTGCTAGCATATAAAATTACAAAACACTTGTACAAACCCAATGAACCCTGTTAGGTTTGTTGACATCAATTCTCGCTCATTTCAATCTAAACCAGGTTAGTCCTTTTGGTCATATGTATTTAACGTCTAAATTAATATTTTCTAGTAACTTCGTCAACCTTAAAATATTCTTGCCGGCTTTCAGAAATGTTTATAGAGATAGGGTATACATAGGTGCGTTCATATGGGTGAGTGTACATGCGTTATGATGACTAACGTTTATAATGTGTTTCTTAAAAAAGATTTAAATATTATTGACCACCGATAACTTCTCATATACTCCCTCCGTCCCAAAATATAATCATTTTTGGATTCTGACACAGTCTCCGAGATACTACTTTAACGGTTTGACCAAAAATATCTATAATTTGAATAAAAAGAGTTGCATATTATGATAGTTTGTTTAATGATAAATCTAGTAACATCAATTTTATATGATTGATCTTTTTTTCTATTAATAGTCAAAGTTAAACATAATTAACTTGTCACTATGCTAAAAATGTTTATATTTTGGGACGGAGGGAGTAGTTAGTAAAAGAAAAGAAGTGATTACATAGATTTTTTTTTCTTGAAAAGCACATTCTATGTACTTACTAGATTTTGAAAATCTTATAATATAAACATAGAAGTCAAAGTTTTAAAAGTTTGACTGAATTTTGTCTTAAACATAACCGGAGAACTAACTTGTTTCAAACAAACTTGCCATTTTTTTTTGTCGGATGATATAAAATTTACATATCCCTCGTGTCCCATATCAATACACTCCATATGTATAACAACATAATATGTCAATACACTTCATATCAGATACGAGTCTAAATCCTCTTGTATCATTTTGGTTGTGTATATCCTTTCGTAGATATAGAAATTGGATTAATGAAAAATCCATTATCTTAGAAAAAAAAAGGTAACTTATCTAACTTGGCCTTGCAGGTTTCACGCAGCAACCACTGAAAGCTTGCTGCGGCGGGGGCGGGCCGTACAACTACAACCCTGGAGCGGCGTGCGGCTCACCGGGCGCGTCAACCTGCGGCGACCCGTCGGCCTACGTCAACTGGGACGGCATCCATCTCACCGAGGCCGCATACAAGTACGTCGCCGGCGGCTGGCTCAACGGCGTCTACGCTTACCCGTCCATTCTTAGCCTCCTGGCCCAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019363