Os11g0696400

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Revision as of 09:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0696400| Description = Glycoside hydrolase, family 3, N-terminal domain containing protein| Version = NM_001075043.1 GI:115486734 GeneID:435...")
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Gene Name

Os11g0696400

Description

Glycoside hydrolase, family 3, N-terminal domain containing protein

Version

NM_001075043.1 GI:115486734 GeneID:4351177

Length

2827 bp

Definition

Oryza sativa Japonica Group Os11g0696400, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:30321686..30324512

Sequence Coding Region

30321686..30322201,30322290..30323259,30323466..30323810,30323893..30324512

Expression

GEO Profiles:Os11g0696400

Genome Context

<gbrowseImage1> name=NC_008404:30321686..30324512 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:30321686..30324512 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctcttcttctccatcccatctgcacctcctcatactcttcttcttcgccatagccgcctcctctctattgtccaccgcgacctccacgcgcgcctcgccggccgacactgccgtcggcggcatcgccgccaaggtgtacaccaaggtgtgcgacgcgacgaggttcgccggcctgggcctgaacatgacggagttccgctactgcgacgcgtcgctgccgtacgccgaccgtgtccgcgacctcatcggccggatgaccgtggaggagaaggtcggcgccctcggcgactggaccgacggcgctgcccgcatcggcctgccggcgtacaggtggtggtcggaggcgctgcatggcctctccagcaccggccccaccaccaagttcgacgacctcgccacgccgcacctccactccggcgtctccgccgtctacaacgccaccgtcttcgccaacgtcatcaacagcgccgcctccttcaacgagaccctctggaaatccatcggccaggctgtgtcgacggaggcgagggcgatgtacaacatggggaagggagggctgacgtactggagccccaacatcaacgtggtgcgcgacccgaggtgggggagagctctggagacgcccggcgaggacccgtacgtcgtcggccgctacgccgtcaacttcgtccgcggcatgcaggacatccccgggcacgaggcggtcgccgccggcggcgaccctaacacgcggccgctcaagacgtcggcgtgctgcaagcactacgccgcctacgacctcgacgactggcacaaccacacgcggttcgagttcgacgcgcgcgtcgatgagcgcgacatggtggagacgttccagcggccattcgagatgtgcgtccgcgacggcgacgtgagcagcgtcatgtgctcgtacaaccgcgtcaacggcatcccggcgtgcgccgacgcgcgcctcctgtcgcagaccatccgccgcgactggggcctccacggctacatcgtctccgactgcgacgccgtccgcgtcatgaccgacaacgccacctggctcggctacaccggcgccgaggccagcgccgccgcgctcaaggctggcctcgacctcgactgcggcgagagctggaagaacgacaccgacggccacccgctcatggacttcctcaccacctacggcatggaggccgtcaacaagggcaagatgagggagtccgacattgacaacgccctcaccaaccagtacatgacgctcatgaggctcggctacttcgacgacatcgcccagtactcctccctcggcaggcaggacatctgcaccgaccaacacaagaccctcgcccttgacggcgcacgccagggcatcgtcctcctcaagaacgacaacaagctgctgccgctcgacgccaacaaggttggcttcgtcaatgtccgtggccctcatgtccaggcccctgagaagatcatggatggagactacacaggtcctccgtgccgatacgtgacgccgcgccaaggtgtaagcaagtatgtgaggttttcgcatcgcgccaacactaccatctacttcggaggcctaaacctcaacattgagagggagggcaacgacagggaggacattctcctgcccaagaaccagacagaggagatcatccgtgtcgccaaggcgtcgccgaacccgatcatccttgtcatcttgtcaggaggtggcatcgacgtctccttcgcgcagaacaaccccaagatcggcgccatcctctgggctgggtaccctggtggtgaaggaggcaatgccattgcagatgtcatctttggaaaacacaatccaagtgggaggctgccattgacatggttcaagaacaagtacatctaccagctgcccatgacatccatggatctccggccggtggcgaagcacggctaccctggaaggacatacaagttctacgacggcccggacgtgctctacccgttcggctacggcctcagctacaccaagttcctctacgagatgggcaccaacggcaccgccctcatcgtccccgtcgccggcggccactgcaagaagctcagctacaagtccggcgtgtcaaccgcaccggcatgcccggcgatcaacgtgaacggccacgtgtgcaccgagaccgtcagcttcaacgtgagcgtcaccaacggcggcgacacgggcggcagccacccggtgatcgtgttcagcaagccgccggcggaggtggacgacgcgccgatgaagcaggtggtggcgttcaagagcgtgttcgtcccggcgtggagcacggtaagcgtgagcttcgagctcaacgtgtgcaaggcgttcggcatcgtcgagaagacggcctacaccgtcgtgccgtccggcgtcagcaccatcctcgtcgagaacgtcgactcgtcggtgtctttcccagtcaagatcgacttcgctatttag</cdnaseq>

Protein Sequence

<aaseq>MASSSSPSHLHLLILFFFAIAASSLLSTATSTRASPADTAVGGI AAKVYTKVCDATRFAGLGLNMTEFRYCDASLPYADRVRDLIGRMTVEEKVGALGDWTD GAARIGLPAYRWWSEALHGLSSTGPTTKFDDLATPHLHSGVSAVYNATVFANVINSAA SFNETLWKSIGQAVSTEARAMYNMGKGGLTYWSPNINVVRDPRWGRALETPGEDPYVV GRYAVNFVRGMQDIPGHEAVAAGGDPNTRPLKTSACCKHYAAYDLDDWHNHTRFEFDA RVDERDMVETFQRPFEMCVRDGDVSSVMCSYNRVNGIPACADARLLSQTIRRDWGLHG YIVSDCDAVRVMTDNATWLGYTGAEASAAALKAGLDLDCGESWKNDTDGHPLMDFLTT YGMEAVNKGKMRESDIDNALTNQYMTLMRLGYFDDIAQYSSLGRQDICTDQHKTLALD GARQGIVLLKNDNKLLPLDANKVGFVNVRGPHVQAPEKIMDGDYTGPPCRYVTPRQGV SKYVRFSHRANTTIYFGGLNLNIEREGNDREDILLPKNQTEEIIRVAKASPNPIILVI LSGGGIDVSFAQNNPKIGAILWAGYPGGEGGNAIADVIFGKHNPSGRLPLTWFKNKYI YQLPMTSMDLRPVAKHGYPGRTYKFYDGPDVLYPFGYGLSYTKFLYEMGTNGTALIVP VAGGHCKKLSYKSGVSTAPACPAINVNGHVCTETVSFNVSVTNGGDTGGSHPVIVFSK PPAEVDDAPMKQVVAFKSVFVPAWSTVSVSFELNVCKAFGIVEKTAYTVVPSGVSTIL VENVDSSVSFPVKIDFAI</aaseq>

Gene Sequence

<dnaseqindica>1..516#605..1574#1781..2125#2208..2827#atggcctcctcttcttctccatcccatctgcacctcctcatactcttcttcttcgccatagccgcctcctctctattgtccaccgcgacctccacgcgcgcctcgccggccgacactgccgtcggcggcatcgccgccaaggtgtacaccaaggtgtgcgacgcgacgaggttcgccggcctgggcctgaacatgacggagttccgctactgcgacgcgtcgctgccgtacgccgaccgtgtccgcgacctcatcggccggatgaccgtggaggagaaggtcggcgccctcggcgactggaccgacggcgctgcccgcatcggcctgccggcgtacaggtggtggtcggaggcgctgcatggcctctccagcaccggccccaccaccaagttcgacgacctcgccacgccgcacctccactccggcgtctccgccgtctacaacgccaccgtcttcgccaacgtcatcaacagcgccgcctccttcaacgagaccctctggaaatccatcggccaggttggttacaatttacaattcatcgatcatctcttcatttcaatctatagatcatacaaatctatatgaattttgttcaaatttgtaggctgtgtcgacggaggcgagggcgatgtacaacatggggaagggagggctgacgtactggagccccaacatcaacgtggtgcgcgacccgaggtgggggagagctctggagacgcccggcgaggacccgtacgtcgtcggccgctacgccgtcaacttcgtccgcggcatgcaggacatccccgggcacgaggcggtcgccgccggcggcgaccctaacacgcggccgctcaagacgtcggcgtgctgcaagcactacgccgcctacgacctcgacgactggcacaaccacacgcggttcgagttcgacgcgcgcgtcgatgagcgcgacatggtggagacgttccagcggccattcgagatgtgcgtccgcgacggcgacgtgagcagcgtcatgtgctcgtacaaccgcgtcaacggcatcccggcgtgcgccgacgcgcgcctcctgtcgcagaccatccgccgcgactggggcctccacggctacatcgtctccgactgcgacgccgtccgcgtcatgaccgacaacgccacctggctcggctacaccggcgccgaggccagcgccgccgcgctcaaggctggcctcgacctcgactgcggcgagagctggaagaacgacaccgacggccacccgctcatggacttcctcaccacctacggcatggaggccgtcaacaagggcaagatgagggagtccgacattgacaacgccctcaccaaccagtacatgacgctcatgaggctcggctacttcgacgacatcgcccagtactcctccctcggcaggcaggacatctgcaccgaccaacacaagaccctcgcccttgacggcgcacgccagggcatcgtcctcctcaagaacgacaacaagctgctgccgctcgacgccaacaaggttggcttcgtcaatgtccgtggccctcatgtccaggcccctgagaagatcatggatggagactacacaggtacgtaggtcgtcaaatgcaaaaattctcacttatgttactgttcatggtccgacaatggcatcatgttactgaacattattgattgatactttttttttcattgttgaaatgcttgacaaaccttgatgttactactgttcatgatccgacaatggctcaatcaattacagaaaaatgttactgaatactactttgaaatgcaggtcctccgtgccgatacgtgacgccgcgccaaggtgtaagcaagtatgtgaggttttcgcatcgcgccaacactaccatctacttcggaggcctaaacctcaacattgagagggagggcaacgacagggaggacattctcctgcccaagaaccagacagaggagatcatccgtgtcgccaaggcgtcgccgaacccgatcatccttgtcatcttgtcaggaggtggcatcgacgtctccttcgcgcagaacaaccccaagatcggcgccatcctctgggctgggtaccctggtggtgaaggaggcaatgccattgcagatgtcatctttggaaaacacaatccaagtaattcagaatgcaaatcacatcattattttattcttttgacacatcaaatctcaaaatcaaatgttctttgattgaacaggtgggaggctgccattgacatggttcaagaacaagtacatctaccagctgcccatgacatccatggatctccggccggtggcgaagcacggctaccctggaaggacatacaagttctacgacggcccggacgtgctctacccgttcggctacggcctcagctacaccaagttcctctacgagatgggcaccaacggcaccgccctcatcgtccccgtcgccggcggccactgcaagaagctcagctacaagtccggcgtgtcaaccgcaccggcatgcccggcgatcaacgtgaacggccacgtgtgcaccgagaccgtcagcttcaacgtgagcgtcaccaacggcggcgacacgggcggcagccacccggtgatcgtgttcagcaagccgccggcggaggtggacgacgcgccgatgaagcaggtggtggcgttcaagagcgtgttcgtcccggcgtggagcacggtaagcgtgagcttcgagctcaacgtgtgcaaggcgttcggcatcgtcgagaagacggcctacaccgtcgtgccgtccggcgtcagcaccatcctcgtcgagaacgtcgactcgtcggtgtctttcccagtcaagatcgacttcgctatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0696400, RefSeq:Os11g0696400

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os11g0696400&oldid=4814"