BGIOSGA019404

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Revision as of 02:50, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019404| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019404, complete gene.| tag = OsI_189...")
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Gene Name

BGIOSGA019404

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019404, complete gene.

LocusTag

OsI_18988

Ensembl Transcript ID

BGIOSGA019404-TA

Ensembl Protein ID

BGIOSGA019404-PA

Length

8595

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8614268..8622862

Sequence Coding Region

8614268..8614291,8615200..8615373,8615812..8615892,8616019..8616087,8616542..8616605
,8616803..8616882,8616979..8617062,8617233..8617317,8618426..8618511
,8618692..8618813,8619609..8619669,8619749..8619847,8622395..8622496
,8622576..8622617,8622722..8622862

Genome Context

<gbrowseImage1> name=IndicaChromosome05:8614268..8622862 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:8614268..8622862 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTCCCACTGACTCCGACCAGGTCTGCCAGACAACCACCGGCACTGCTCGCCTATGGCAGCTGAGAGAGACACCGCTAGTAGTGTCTGATGCGTGTCGAAACCGTGTCAGACACGAGCTGACACGGGGATGCGTGTCGACATGGAAAATTTTTTTGGACTCGCGTGTCCCGGTAACACTGGTTATATCTGGGGAGGTTTTGGTAGAAGCAAATGGTGTAACACGGACATTGGTTTTGAATAGGCCAAAGCAGTTGAATGCCCTCTCCTCTGCAATGATAACGTGTTTTTTGAGGTGCTTCACTGCTTATGAGGAAGATGATGGAGTTAAACTATTGATTGTGAAGGGAAAAGGAAGAGCATTTTGTGCAGGTGGAGATGTTGCTGCAGTTGTCCGGTCTATAAATAATGATAGCTGGAAATATGGTGCTCATTTTTTCCGAAATGAATTTCTGTTAAACTATATCATTGCAACATATAGCAAACCTCAGGTTTCGCTTCTAACTGGAATTGTCATGGGTGGAGGTGCTGGTGTTTCTATACATGGAAGGTTCCGAGTTGTCACAGATAGCACGGTTTTTGCTATGCCAGAAACAGCGTTGGGTCTCTTTCCAGATATTGGGGCTTCATATTTTCTATCTCGACTTCCTGGGTTCTATGGAGAGTATGTTGGTCTTACTGGTGTAAGGTTGGATGCTGCTGAAATGCTTGCTTGTGGCCTAGCAACTCATTTTGTACCTTCAGATAGGCTGTCTTTGCTAGAAGAATCACTTAAAAAGGTTGATACATCTGATCCATTTGCTATATGTGGAATTATCGATCAATATTCGCAACAACCATCTCTGAAAGAAAAAAGCGCTCTGAATAGGCTAGAAATCATCAACAAATGCTTTTCCAAAAAAACAGTAGAAGAAATCATAGCCTCTCTTGAACAAGAGGCTCCAAATGTTGCTGATGAATGGATTGCTTCTGCAATCCAGTCCATGAGGAAGGCTTCTCCTACTAGTATGAAAATATCCTTGAGATCGATAAGAGAAGGGCGAACACAAACTGTTGGTGAATGCTTACGTCGAGAATATAGAATGGTTTGCCATGTGATGCGTGGTGACTTCAGTAGAGACTTCTTTGAGGGATGCAGGGCTATATTGTTGGATAGAGATCGAAACCCAAAGTGGATGCCTCCAAGGGTGGAAGAGGTGCACGACGAGGTGGTCGAAAAATATTTTTCCAAAGTCGATGATCCAGAGTGGGAAGATTGGACCTACCTCCTAGACGTTCCCATGGAAGGAGGCTTGTTCCCAAGCTTTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MPPTDSDQVCQTTTGTARLWQLRETPLVVSDACRNRVRHELTRGCVSTWKIFLDSRVPVTLVISGEVLVEANGVTRTLVLNRPKQLNALSSAMITCFLRCFTAYEEDDGVKLLIVKGKGRAFCAGGDVAAVVRSINNDSWKYGAHFFRNEFLLNYIIATYSKPQVSLLTGIVMGGGAGVSIHGRFRVVTDSTVFAMPETALGLFPDIGASYFLSRLPGFYGEYVGLTGVRLDAAEMLACGLATHFVPSDRLSLLEESLKKVDTSDPFAICGIIDQYSQQPSLKEKSALNRLEIINKCFSKKTVEEIIASLEQEAPNVADEWIASAIQSMRKASPTSMKISLRSIREGRTQTVGECLRREYRMVCHVMRGDFSRDFFEGCRAILLDRDRNPKWMPPRVEEVHDEVVEKYFSKVDDPEWEDWTYLLDVPMEGGLFPSFD</aaseq>

Gene Sequence

<dnaseqindica>1..24#933..1106#1545..1625#1752..1820#2275..2338#2536..2615#2712..2795#2966..3050#4159..4244#4425..4546#5342..5402#5482..5580#8128..8229#8309..8350#8455..8595#ATGCCTCCCACTGACTCCGACCAGGTTAGTTCGCCGCTTCCTCCTCCTTCCCCTACCTCGTCATTCACTCCCGCGTTCGATTCCTGGTTTTTTTGCGCTCTGCCTCATTGGCTCACGGATCGAAGCCTAATCAACCATCCGCGAATTAGGCGCTACTTTTCCTAATTCGATTCGGTCGTATCAATTGATCCATTTAGGTTGTTTTAAGATGCTCGATTGCGTCTGTAGCAGCAATCTGATCTCTAATTTGATTGTTGATGCGGCTGTGTACAACTGTAGTAGACAATTGCCTATGGATGGCGTGAATGTTTTATTATTCTTTAATCACCATGGCGATTGTAGTCACATACATGGTCATATTTCGTTCACTCTACTAATTTTTATATTATACTCTTGTAGTAGTTCACAGGCAATTCAGAAATTCGACTAGGTTACTGCAAACAGATTATGCTAATTACTTATCCAGTGTTACCGGGACACTGACACGGGTGTCGGAGTCCGACTCGGCAAGCTAAGAAAAAATAGGATTCGGGGACTCGCTCCATAAATATGATTTTTAGTGAAAATATTATATATATCATCAAATAAAACATACTCTTAGTCAGTAAAACACTAAAACATATGGTGTCACACATTATTCTGCACAGAAGATCCTATCTTCTTATTAGTTAGGACAAAGACTGACAGCCAAAATAAGTGAATTTCATGTGTAGAGGATCCCTTGTGCAGTTGTGCACAAAAAAACCCACTGCTATCCTGCCATCCACATGCCACTACCAATACTACTCATGAGTACTACTAGTTGTCTCTGGAGTACTACTAGTATGCCTGTGCATTGTAGACGCACGCACGCAGCTACTTTTCCCATCGAGCTCTCCCATCCCATTCTCTCTCTCTCTCTTCTGCCTTCTTTTTCCCATCCTCTCCCACAGGTCTGCCAGACAACCACCGGCACTGCTCGCCTATGGCAGCTGAGAGAGACACCGCTAGTAGTGTCTGATGCGTGTCGAAACCGTGTCAGACACGAGCTGACACGGGGATGCGTGTCGACATGGAAAATTTTTTTGGACTCGCGTGTCCCGGTAACACTGGTTATATCTGGGGAGGTCGGTTTTATCTTAGGATTCAACTTCAAACCATTCTGCTGTAGAATTCCTACAAATAAAAAAAAATAGCAGTCTTGTGTTTGACCCAGATTGTTTCTGTATCCTCTGTTCGTCTCAACTGGCCTCAAGAACACAACTATTTTAAGGAATATATAAGCAGAATGGAGAGTTTAAACTCCATTCTAATTTTGTTCGGTTTTGTCTGTTGTGCGTGTAATTAGGCATTTAATTTTCCTATTTCATGTTTTTTTTGCCAAACGGCCAAATGGCCACACTCTGGCATTCGATGTAACAATTTATCATATCGGGAATTATTGTTACAATCTGTATCTTCTTCGTGTGCTGTCTACCACAAGTCTTATCTGTAAGATGTCATATTTTTTATGATTGGTTCTACCTGTTACTGAGAATATCTTCTACTATTTCTCTTTTTGCCAGGTTTTGGTAGAAGCAAATGGTGTAACACGGACATTGGTTTTGAATAGGCCAAAGCAGTTGAATGCCCTCTCCTCTGCAATGGTATGACTTCTAAAGACAAAAACATGACAATGATTCAATAAGTAATGGGGCATATATGGTATTAGCGACTATATATAGGGTGCAGGAACACTGATTTGAGAATTTTTTTTTGCTTTCATTTTCTAGATAACGTGTTTTTTGAGGTGCTTCACTGCTTATGAGGAAGATGATGGAGTTAAACTATTGATTGTGAAGGTAACGATCATGTTTGAGTCCTACAATAATGAAATATCTAATGTGGTCCATATTTGAACAATGTATTTAGAGGCTTATCTTTTTTTAAAAAATGAATAACGAGGTAGTAGCTAACATCAAACATGAATTGCCTGTTTAAATTTCCAAAATCATGAATTCAAAGTTTCATCCGCTTATTGAAGTTTGTACAACCAAGTTGTAGTAACGTAAAACAACAATGCTGCCCGTGCCTTTTGTTGCATGCTAACTGTCCTTTTGCCATTTGTAAATGTAATTGATTTTCGCCGGGATGAAATGTAATTGATTTTCTGTTGCTGATATATGAGTCTTGACTTATTGGGATAATTCCATCTTTAGTACCTCCTGCTGTTACCTTTACTGCTGCTGTTTGTGCTCAGCTTGATTTTTATAACTCCTTGCCATTCTTGTCATCACTTGTTTTTTCCTTTGTCAGGGAAAAGGAAGAGCATTTTGTGCAGGTGGAGATGTTGCTGCAGTTGTCCGGTCTATAAATAATGGTAAACAACACATATGATGCATCCTTGAGACTATGATGTCAAATATCTTGAGCTGGTTTATTTTTGGCTTTTAGCTGTTTTGCTTTGACTTCCTTTGCCTTTCCATATGCTATATGCTAATTCACTGTTAACATGCAATATATAGAGAATTTTCTTCTTGACATCTAATTAGTTTTACTATGCATTTCTTATATCAGATAGCTGGAAATATGGTGCTCATTTTTTCCGAAATGAATTTCTGTTAAACTATATCATTGCAACATATAGCAAACCTCAGGTAAGCTGTCGCTATGGCTTTGAAACTGCTTGTCCACATATTTGTTGTCATTATTGCTCAATTCTTACCACTGAATGCTACAACACTCTTATCTAGGTTTCGCTTCTAACTGGAATTGTCATGGGTGGAGGTGCTGGTGTTTCTATACATGGAAGGTTCCGAGTTGTCACAGATAGCACGGTATATATTACGGAACAAACTCTATATGAACCTTCCGTTTTTGCTTAAATCATTTCAAAAAGGATGTAGCTGGTGTGCATAAAAAGCTTGTTTGATTCTTTTCATGGGATAAACAGCTTACCAGCATATGCCTAGAGATTGACTCTGTATTTTTACTACTATTTATACAGGTTTTTGCTATGCCAGAAACAGCGTTGGGTCTCTTTCCAGATATTGGGGCTTCATATTTTCTATCTCGACTTCCTGGGTTCTATGGTGAACTTTTTTCCTATCTCATATCTCCTTTATTCAATTGAACTTTCACACATGATCATATGAATTCTCATTGCAATGTCTAAAACTGATTATGAATACTGGAAACCCATGTGCAGTTATGCATCCTTGAGTGCTTATTTTTTAGGGAAAATCCAACCTCAAATCTTGCAAATTTTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGGGGAGAAGAGGGGGGAGAGTTCGCCGGCTTTAGAGGGATGGCCGTGGGAGGCGGTAGCCCGGCGGTGGGCGGCGGATCGGGCGGGCGGCGAGGTGGCGGCGCCGCCGCCGAAGCCGCGGGGTCGGAAGCTCGCGGTGGGCCGGTGTAGGAGACGGGGGCAAAGCGGAAGATATGTCAGGAGGAGGCGGCCGGTGGTGGCGCCCCGCAGTCGGAGACGGGGACGACGGCCGCCATCGGCTTGAGGGAAGAAGAGGACAGGGAGGGGGAGGGGAGGGCGCCGGCCGGGGGGACCTCGCCTGCGCCGTTGACTCCCTTCGGCCAGCCGGCGAGGCGGGCGGCGGCGTGTTGGGGCGGTGGCGGCGGCGGATCAGGCGGTGGCGAGATGGGCGCGCGAGGGGAGCGGCGGCGGCGGAATGCGCGAGGGGGAGAGGAACGGGAGAAAAAAGGTTAGGGTTAAGGCTGTGCACGAATCTCAAAGCATATCCAATGGTCCAAAATTTGAAAGATTGGAGGTGGGATATTCTATCAACAGATGTATAGACAGTCCCTATTTTTTATTTAGGATGATCATATTATTACATGATTTTAAAATTTGTGGGTGTGGAAATATATATGGCCACTCTGTTTCTCCCATCATCTTAATAAATTTTGGTAAAAACAAGAAATGTATGTGGCCAGATTTTTTATTGCCTGTCCACAGGATTCATCTGTTGAATTTTAATATAATGGTGAATTTGTTATAATTACACCATACAAAGTTATAATTTGATGGGAAACTATCATTGGAGATCGTTTTCACTGATTTTTTGTTATGTCTTTCTCAGGAGAGTATGTTGGTCTTACTGGTGTAAGGTTGGATGCTGCTGAAATGCTTGCTTGTGGCCTAGCAACTCATTTTGTACCTTCAGATGTAGGTCTGCCAGTGGCTTTTGAATTTTATGTTCAGTGTGGGACCACATATTTGTTCGTTTTATGTTTGGAAATCAACTGTTATAACATGTCCTACACACTTGACTTGTTCCAAGTGTGATTATAGATAACCTGAGTATTGCTGGTTTTCTAATTCCTACTAGTACACTCACTCTTGCAGAGGCTGTCTTTGCTAGAAGAATCACTTAAAAAGGTTGATACATCTGATCCATTTGCTATATGTGGAATTATCGATCAATATTCGCAACAACCATCTCTGAAAGAAAAAAGCGCTCTGAATAGGTAAGCGTGCAATTGTCCAGACATTACCTTTTCATGCACGTCAAGCTTATTCTACTTCCTTTGTGTACCCTGTAAAAATGACGTATCCTGGACAGGTGGGATATTCTGGTTCACACCAAGTAATCTTGTCGTACAAATCCTTTTTGGCATGTTAAATTTAGATTGATTAATCTACAGTTTTTAAGTTACTAGTAGCTACATAAAGTTCCATAGTTATACCATCAATATAAATTTCATGCAGGAAACTCTCCTCATCCTGGGGGCGTGTTTGACCAATTTATCCTCTCCAAACAACTTTATTTTGGGTCCAAGCCTCAGCCCCCAGATAGATAGACTAGTCCTTTTGAAATAATATTAGCTTGTAATGAAGGGCAGGTGGAGAAATGTAAGGAATTGGAATGGGGGAGATATAGGAAAGCAACAGCATGCACTTCCCACATCTTGTGTCTTCTTTCAATAGATGGATGGGCTTCAACTTATCAAAAAGCTTGGTAATGGTTGTCTGGCCTGGCTTTAAATAAGCCGTTCCCTATGCCCTAACGGCCTAACCTGTTACCCGTGTGTTTTCTATATTCTCCTCATCTTTGAACTCATTTTTGGGTATTGCTTTTCTTAATCTTGTTTGAAGGCCAAAAAGGCAATTGTCAGTGCATTGTAACTTGGAAGGACTTATTTTAGTTTGTCAGGAGATTCCATTTGTTCCTCTTTCATTTCAAGGTTTTGTTTTCTCATTTCATTCTCAGGTCAACTTTTATTGCCTAATCCATATCTGCTACTTCCGTCATATGATTGCAGGCTAGAAATCATCAACAAATGCTTTTCCAAAAAAACAGTAGAAGAAATCATAGCCTCTCTTGTGAGTTATGCTAAGTCCTCATTTGCTTTCTATGGACTCTCCAGTTCTGTTGTGCTAAATTTGATGTGTATCATGTTAGGAACAAGAGGCTCCAAATGTTGCTGATGAATGGATTGCTTCTGCAATCCAGTCCATGAGGAAGGCTTCTCCTACTAGTATGAAAATATCCTTGAGATCGGTATCCTCTCAAACATTTCCAAAGCATACGTCTTTATGTTACTCAAGTCATTCTATCTTGGTGCCTTCTGATGCAAATTATTGTAGTGTAAGGCACTACTATTTATTTAGACCCATCAATCCTTTATATGGTTTCATATGACCAGTATTTATATTGCTCAAGCGCATACTTCAGATAGCTTTATGAACTGAACCCTACTCTTCTGTCTTGGCAGTTGGCACAACAGATCAGCCCTATAGCCAAAAAAACAAACCTTCTAAGATTATAGCTTTTGCATAGTCAAATTGCATGTATGGGCATACCAGTTCTAAAAGCTTTGTAAATGTCTTTGAAACTAGTCGTTGGAGGGAAGACAAGGCTCGTTCACTCCACAGAAGAGTACATGTGCTAGAAAAGGCAGCCAGCTTAAAAACACCAACTACTTTCTTAAGCCTTATTTAGTTTGGTTGCCTACGCTGATCTCCGGCGTGCTATGCAACACCCCCTGCTTGCTTCTTTCTGTTCGACTTGGAGCTTGCAGCCTCCCTACCCTTGCTTATGACCTATTCTTAATAGAACCGATCTGATTTTCACTACAAGAGGAATTCCGTGCTTCTGCCGGATCCTCCCTATCTCCTGATCAAGCTTGTGTTGGTAAATACTCCCTCCGTTTTTTAATAGATGACGCTGTTGACTTTTAAACACATGTTTGATCATTCGTCTTATTTAAAAATTTTATGCAAATGTATAAGATACAAATCATGCTTAAAGTACGTTGAGTGATAAAACAACTCACAACAAAATAAATTATAATTACGAATGGTCAAACGTCTGACAAAAAGTCAACGGCGTCATCTATTAAAAAACATAATGTAGTACTCCAGGGATTTTGAGTTTTTGCTTGTAACGTTTGACTACTCGTCTTATTCAATTTTTTTAAAAAATATTATTTATTTTATTTGTGACTTACTTTATTATCCACAGTACTTTAAGCGCAACTTTTCATTTTTGATATTTGCAAAAAAAATTTGAATAAGACGAGTGGTCAACGTTACAAGCAAAAACTTAAAAGCCCTCATATTGTGGGACGAGGGAGTATTGTTTAGTATGGCCTATAGTAGTACACTGTTTGGGACAGAGTTAGTGGCCTTCTCACAACATCCCGTCCGGCGGAAACTGTGGAGGGGGTGGCTAGCGCGCGCGTGGGCACCAGGAAAGTAGCTGGCGAGCACTCCCCCCTTCCCTTTAGTCTTAACTATCTATATTAGTTAATATACTTAACACTAATGATAGTAATTAGGAAAGATTCGGGGGATTTTTTTACTAACAGATTAAAAAAATTTTAAGTTAGATTTGAAAACTTTCGATTTAAGTTTTAAATTTTAAAGTCAAATTTTAAAAACTTTCAACTCATATTTGAAAACTTTCAACTTGAGATTTGAAAACTTTCAACTCAGATTCGAAACTTTCAACTCAAGAATCGAGATTCGAAAACTTTCAAGTCCGGATTTGAAAATTTTGAAAACTTTCAATTTGAGATTTGAAAACTTTCAACTCGAGATTCGAAAACTTCCAAGTGCAGATTTGAAAATTTTGAAAACTTTCAACTCGAGATTTGAAAACTTTCAAATCGAGATTTGAAAACTTTCAAGTTCAGATTTGAAAATTTTCAACTCCAAATTTAAAAACTTTCAAACTCAAAATATGCTAAAGATAAAAAAAAATCAGAAAAAAGTGAGAAAAAAAAAGGAAAAAAAGGGTAAAAAAAAAACGAAAAAAAATCGTAGCGGAGGCGCGCGTGCCGGCGCAGCGGCGCTGGGCCTTCTGGGCCGGAAACGCGCGCCGCCGGCACGCTCGCTACAACTAGCGGAACAAAGCAGTTAGATGGTTCACTTTGTATAACCACTACAATTTTGACAGAAAATAGTGTTATGGTTAGTTTCTAGCCTTTTAAGATCATGTGACCTATCTTTTGGGAGTTCTGGTCTTTTTCACCAGGCCGACAACGAAGGAAGCCCTGACCAATTTTATTAAGATCAAGAGGAGTAAAGTATTGTTTACAACAAACATGGTTGTTTAGGGATCACCCTAACACAGGAACACAACTTTAAAGCTCAGAATTGGCCCTAAGTCCGGGAGAGGCACAGAATTGGTTGCTGCCACAACAGGGCAGCCCTCTATCGGCGCACTTCAGTGATGAACATTCCTCCCAAACATGCATCACGCTAAGTCCATTCTTCTATGATGCAGCAGATTACCTCAGAGGCCGATTTGCTGGCACCGTCAAACACCTGAGCGTTCCGTTCTTTCCACATTATCCGAGAGATTAGAATTACTACTGCGTCAAATGGGAGTTCCAATCTCACCATGAGCTTCGAGGTGTCAAACCTCCAGCTATCACTACCTACTAAGGTCTAAAGTGGAGCTTAGTCTCTAAGAAAAGTTTGTTTTACACCTAACATTCAGTAGGGAAGGTCTTTGTTTTACTGTAGTATATGTAGTTCGCGAGACGCTAGCCATCTGTGCCCCCATTATGTTCTTAGCTTGTTGTATTTACTGTGAGTTCAGATAAGAGAAGGGCGAACACAAACTGTTGGTGAATGCTTACGTCGAGAATATAGAATGGTTTGCCATGTGATGCGTGGTGACTTCAGTAGAGACTTCTTTGAGGTAAATATCTATCTACATCTCCCCATGACATGTTCACTTAAGATGAACATACTTTGGACGATTCAATTCCTATTTGCAGGGATGCAGGGCTATATTGTTGGATAGAGATCGAAACCCAAAGGTCAGCTTAACATCCTGTTTGTCAGAAAATTCGTTCTTCACATATTGTCTAATCTGGCATGGGCATAGCATTAAATCTAACCCTGACAGCTTTGCTAATTGCAGTGGATGCCTCCAAGGGTGGAAGAGGTGCACGACGAGGTGGTCGAAAAATATTTTTCCAAAGTCGATGATCCAGAGTGGGAAGATTGGACCTACCTCCTAGACGTTCCCATGGAAGGAGGCTTGTTCCCAAGCTTTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019404