BGIOSGA019414

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Revision as of 02:51, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019414| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019414, complete gene.| tag = OGR1| ...")
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Gene Name

BGIOSGA019414

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019414, complete gene.

LocusTag

OGR1

Ensembl Transcript ID

BGIOSGA019414-TA

Ensembl Protein ID

BGIOSGA019414-PA

Length

2012

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8882166..8884177

Sequence Coding Region

8882166..8882219,8882489..8884177

Genome Context

<gbrowseImage1> name=IndicaChromosome05:8882166..8884177 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:8882166..8884177 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAACTTACGCGTGTTCGGGTTTTTTTGGTTTTTCTTCGGTTTTCCTCTGTTCCACGCGCGCCTCCTCACCTCGGGCCACCTCGGCGCCCACCCGGGCCTCCGCGCCCGCTTCCTCGACCGCCTCGCGCTCTCGCCGCACCCCGCCGCGCTCCCCCACGCGCTGCTCCTCCTCCGCTCCCTCCCTACCCCGGCCACCAACGACCTCAACGCCGCGCTCAGGGGGCTCGCCGCCTCGCCGCACCCGGCCCGCTCGCTCCTCCTCCTCGCGGGCCGCCTCCTCCCCGCCCTGCTCCCTCGCCCCGACGCGCTCTCGCTCTCCTTCGCGCTCAAGGCGTCCGCCCGCTGCTCCGACGCGCACACCACGGTGCAGCTCCACGCGCTCGTCCTCCGCCTCGGCGTCGCCGCCGACGTCCGGCTGCTAACCACGCTGCTTGACTCGTACGCCAAGTGTGGAGATCTCGCGTCCGCGCGGAAGGTGTTTGATGAAATGACCGTGCGGGACGTGGCCACATGGAACTCGCTGCTGGCGGGGCTAGCGCAAGGCACGGAGCCTAACCTTGCTCTCGCGCTGTTCCACAGGCTGGCTAACAGCTTCCAGGAGTTGCCGTCGAGGGAGGAACCCAATGAGGTGACTATTGTTGCGGCGCTTTCCGCGTGTGCGCAGATTGGCTTGTTAAAAGATGGGATGTATGTGCACGAGTTTGCTAAAAGATTTGGACTGGATCGCAATGTTCGGGTCTGCAATTCACTAATTGACATGTACTCCAAGTGTGGCTCGCTGTCAAGGGCCCTGGATGTGTTCCATTCCATCAAGCCGGAAGACCGGACGCTTGTGTCCTACAATGCTGCAATTCAGGCACATTCTATGCATGGGCATGGGGGTGATGCACTGAGATTGTTTGATGAAATGCCCACACGCATTGAGCCAGATGGAGTGACTTACCTTGCTGTGTTGTGCGGGTGCAACCATTCTGGCCTTGTGGATGATGGGCTCAGGGTATTCAACTCGATGCGAGTTGCTCCAAATATGAAGCACTATGGAACAATTGTGGACCTTCTTGGCCGTGCAGGCCGTCTCACTGAGGCATATGACACCGTCATTTCTATGCCATTTCCAGCTGATATTGTCCTTTGGCAGACATTGTTGGGTGCAGCCAAGATGCATGGGGTTGTTGAGCTTGCGGAGTTGGCTGCCAATAAACTTGCTGAGCTTGGTTCTAATGTCGATGGTGACTATGTGCTCCTATCGAATGTTTATGCATCCAAGGCTCGGTGGATGGATGTTGGTCGAGTACGTGATACCATGCGAAGCAACGATGTGCGAAAAGTTCCTGGCTTCAGCTACACAGAAATAGATGGAGTAATGCATAAGTTTATTAATGGTGACAAAGAGCACCCGAGGTGGCAAGAGATATACAGAGCACTGGAGGACATTGTATCAAGAATTAGTGAGCTAGGATATGAGCCAGAGACAAGCAATGTACTGCATGACATTGGGGAGGAGGAAAAACAGTATGCATTGTGTTATCATAGTGAGAAGCTGGCCATTGCATTTGGGTTGATTGCAACACCACCTGGGGAGACTCTTCGGGTGATCAAAAATCTCCGAATATGTGGGGACTGTCATGTGGTGGCAAAGCTCATCTCTAAAGCTTATGGTCGTGTTATTGTCATTCGGGACAGGGCGAGATTCCATCGATTTGAAGATGGGCAGTGTTCCTGCAGGGATTACTGGTAA</cdnaseq>

Protein Sequence

<aaseq>MENLRVFGFFWFFFGFPLFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALPHALLLLRSLPTPATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQAHSMHGHGGDALRLFDEMPTRIEPDGVTYLAVLCGCNHSGLVDDGLRVFNSMRVAPNMKHYGTIVDLLGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW</aaseq>

Gene Sequence

<dnaseqindica>1..54#324..2012#ATGGAGAACTTACGCGTGTTCGGGTTTTTTTGGTTTTTCTTCGGTTTTCCTCTGGTTTTTGGTTTTTCTTCGGTTTTCCCCGGTTCTTCCGGTTATTTGGGTTTTTAATATATATATAAACTTTGTATACGTACGTATACAAACTTTGTATTCATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCGGCGGCGCGGCATCTGGAATCCCTCCTCCCGCGCCTGGCCTCCCTCCGCCACTACCTGCAGTTCCACGCGCGCCTCCTCACCTCGGGCCACCTCGGCGCCCACCCGGGCCTCCGCGCCCGCTTCCTCGACCGCCTCGCGCTCTCGCCGCACCCCGCCGCGCTCCCCCACGCGCTGCTCCTCCTCCGCTCCCTCCCTACCCCGGCCACCAACGACCTCAACGCCGCGCTCAGGGGGCTCGCCGCCTCGCCGCACCCGGCCCGCTCGCTCCTCCTCCTCGCGGGCCGCCTCCTCCCCGCCCTGCTCCCTCGCCCCGACGCGCTCTCGCTCTCCTTCGCGCTCAAGGCGTCCGCCCGCTGCTCCGACGCGCACACCACGGTGCAGCTCCACGCGCTCGTCCTCCGCCTCGGCGTCGCCGCCGACGTCCGGCTGCTAACCACGCTGCTTGACTCGTACGCCAAGTGTGGAGATCTCGCGTCCGCGCGGAAGGTGTTTGATGAAATGACCGTGCGGGACGTGGCCACATGGAACTCGCTGCTGGCGGGGCTAGCGCAAGGCACGGAGCCTAACCTTGCTCTCGCGCTGTTCCACAGGCTGGCTAACAGCTTCCAGGAGTTGCCGTCGAGGGAGGAACCCAATGAGGTGACTATTGTTGCGGCGCTTTCCGCGTGTGCGCAGATTGGCTTGTTAAAAGATGGGATGTATGTGCACGAGTTTGCTAAAAGATTTGGACTGGATCGCAATGTTCGGGTCTGCAATTCACTAATTGACATGTACTCCAAGTGTGGCTCGCTGTCAAGGGCCCTGGATGTGTTCCATTCCATCAAGCCGGAAGACCGGACGCTTGTGTCCTACAATGCTGCAATTCAGGCACATTCTATGCATGGGCATGGGGGTGATGCACTGAGATTGTTTGATGAAATGCCCACACGCATTGAGCCAGATGGAGTGACTTACCTTGCTGTGTTGTGCGGGTGCAACCATTCTGGCCTTGTGGATGATGGGCTCAGGGTATTCAACTCGATGCGAGTTGCTCCAAATATGAAGCACTATGGAACAATTGTGGACCTTCTTGGCCGTGCAGGCCGTCTCACTGAGGCATATGACACCGTCATTTCTATGCCATTTCCAGCTGATATTGTCCTTTGGCAGACATTGTTGGGTGCAGCCAAGATGCATGGGGTTGTTGAGCTTGCGGAGTTGGCTGCCAATAAACTTGCTGAGCTTGGTTCTAATGTCGATGGTGACTATGTGCTCCTATCGAATGTTTATGCATCCAAGGCTCGGTGGATGGATGTTGGTCGAGTACGTGATACCATGCGAAGCAACGATGTGCGAAAAGTTCCTGGCTTCAGCTACACAGAAATAGATGGAGTAATGCATAAGTTTATTAATGGTGACAAAGAGCACCCGAGGTGGCAAGAGATATACAGAGCACTGGAGGACATTGTATCAAGAATTAGTGAGCTAGGATATGAGCCAGAGACAAGCAATGTACTGCATGACATTGGGGAGGAGGAAAAACAGTATGCATTGTGTTATCATAGTGAGAAGCTGGCCATTGCATTTGGGTTGATTGCAACACCACCTGGGGAGACTCTTCGGGTGATCAAAAATCTCCGAATATGTGGGGACTGTCATGTGGTGGCAAAGCTCATCTCTAAAGCTTATGGTCGTGTTATTGTCATTCGGGACAGGGCGAGATTCCATCGATTTGAAGATGGGCAGTGTTCCTGCAGGGATTACTGGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019414