BGIOSGA019424

From RiceWiki
Revision as of 02:51, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019424| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019424, complete gene.| tag = OsI_190...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019424

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019424, complete gene.

LocusTag

OsI_19034

Ensembl Transcript ID

BGIOSGA019424-TA

Ensembl Protein ID

BGIOSGA019424-PA

Length

1738

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:9168663..9170400

Sequence Coding Region

9168663..9169307,9169372..9170400

Genome Context

<gbrowseImage1> name=IndicaChromosome05:9168663..9170400 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:9168663..9170400 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTTGTGGTGCTCCGGCTGTGGAAGAACCTGTGTTGGAGGAGGTGCAAATTGCAGTTGAGGAGCTCAGGGTGCACCTGCAGGATATTCAACGGAAGGTGGATGAAGATGGGAAGCAGTTTCAAGAACAACTGCAGAACCAGGCCGTACAAGCTCAAGTCCACAAAGATGAGGTAATGCAGAATCTGAAGGTAATCCAAGATATGCTCAGTACTTCATCTAGCTGCAATGGACAAGAGGTTAAGGGAACACCCAGAACTCCTGGAGTAGCTCAGTCTGTAATTGGAGGAAAAAAACCTGAAACTTTTGCTGCTGGTCCTAGTAAACACCCACTGTTTGATTTCAGAAATATGTCCAATTCACCAAATCAGGAGAATATTGAGATGACCATGACACCCAGTTTAGTTACTACACTACCCTTACCGCCACCTCCACCAAACCACATTCCTACAACAGAAAGAAATGCCTCAGTTTTTTTCAACACAAGCACCATAGCGCCGCCACCACCACCACACTTTCCCCAGCCACCTCAATACACTCCACCTAACCAATTCTTTCCCTATCAGCCACAATATCCCTATCAACCACATACTCCCTTTCCGGTTCCTTGGGTCTACCACTACTACCCAAACCCACCACCTCATGAGGACATGGTGCTCATCCTGAACCATACCACCAACCATACAATCCATATTACCACGTACCAAGAACCATTCCATCCACCCCACCACCACCAGTACAATCCTGAACCACACCACCCTCACTATGAACATCGGCCACACTATGCAGACCCTGCAAAATGCTCTCGAAATGTCGATTTTCCTACCTTTGAGGGTGACTATCCGGAGTCTTGGATACGCAAGGCCAAAAAATATTTCTCTTTGTATCAAACTCCTGAGGAAGACAAAGTTTTGCTAGCTGAAGTGCACATTTCAGGAAGAGCTGATCAGTGGATTGAAAGTTCAGCTATTGCGACTGCTTCTCTTTCTTGGCCTGAATTCAAAACCATGGTGTGTCAACGTTTTGCAGCCAAATCCAAGATTGAAATTACTGAAACTTTCAGAAATTTGAAACAGTATGGCTCTGTCGACAGTTATATTGATAAATTTGAGGAAACCATGGCCTTAGTTAAACGCAGCAATCCTACATTGACTGGGGATTACTTCTTGGATTATTTTATCTCTGGACTCAAGGACCATATTAAAAGACCTCTGAAATCTCTCTCAATTTACTCCCTGGTGACTGCTTATGAACATGCTTGCAACTATGATGTTATCCCTCGCTCTGCCAACACCTCTTCTGTTCCTTCCAACAGAAAGACTCCCAAAATTCCACCAAAGCAACCTATCAGAGACAACAAGCAGTCCGCTGTCACTCATACAAAATTTTCTGGCAAGTATTTCCGTTGCAACGAACCCTGGGTACCAGGACAAGGCAGAGTCTGTAAAGCTACCAAGCAAGTCTATTTGGTCACAATGGAAGATGAGTCTGAAATCCTAGATGATGCAGCTTACTCTACTCCTCCTAACAGTCCACAGAAGACTGATCAGCAGGATACACATCTGTTATTACACACCTTGGAGGGCACCACTCCTGCTGCTACTACCTTTACACTATATGTTCTATTGGGTACCACACAGTTCTATTGGGTACCACACAGGCCACAGCCTTAA</cdnaseq>

Protein Sequence

<aaseq>MVCGAPAVEEPVLEEVQIAVEELRVHLQDIQRKVDEDGKQFQEQLQNQAVQAQVHKDEVMQNLKVIQDMLSTSSSCNGQEVKGTPRTPGVAQSVIGGKKPETFAAGPSKHPLFDFRNMSNSPNQENIEMTMTPSLVTTLPLPPPPPNHIPTTERNASVFFNTSTIAPPPPPHFPQPPQYTPPNQFFPYQPQYPYQPHTPFPVPWVYHYYPNPPPHEDMVLILNHTTNHTIHITTYQEPFHPPHHHQYNPEPHHPHYEHRPHYADPAKCSRNVDFPTFEGDYPESWIRKAKKYFSLYQTPEEDKVLLAEVHISGRADQWIESSAIATASLSWPEFKTMVCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFEETMALVKRSNPTLTGDYFLDYFISGLKDHIKRPLKSLSIYSLVTAYEHACNYDVIPRSANTSSVPSNRKTPKIPPKQPIRDNKQSAVTHTKFSGKYFRCNEPWVPGQGRVCKATKQVYLVTMEDESEILDDAAYSTPPNSPQKTDQQDTHLLLHTLEGTTPAATTFTLYVLLGTTQFYWVPHRPQP</aaseq>

Gene Sequence

<dnaseqindica>1..645#710..1738#ATGGTTTGTGGTGCTCCGGCTGTGGAAGAACCTGTGTTGGAGGAGGTGCAAATTGCAGTTGAGGAGCTCAGGGTGCACCTGCAGGATATTCAACGGAAGGTGGATGAAGATGGGAAGCAGTTTCAAGAACAACTGCAGAACCAGGCCGTACAAGCTCAAGTCCACAAAGATGAGGTAATGCAGAATCTGAAGGTAATCCAAGATATGCTCAGTACTTCATCTAGCTGCAATGGACAAGAGGTTAAGGGAACACCCAGAACTCCTGGAGTAGCTCAGTCTGTAATTGGAGGAAAAAAACCTGAAACTTTTGCTGCTGGTCCTAGTAAACACCCACTGTTTGATTTCAGAAATATGTCCAATTCACCAAATCAGGAGAATATTGAGATGACCATGACACCCAGTTTAGTTACTACACTACCCTTACCGCCACCTCCACCAAACCACATTCCTACAACAGAAAGAAATGCCTCAGTTTTTTTCAACACAAGCACCATAGCGCCGCCACCACCACCACACTTTCCCCAGCCACCTCAATACACTCCACCTAACCAATTCTTTCCCTATCAGCCACAATATCCCTATCAACCACATACTCCCTTTCCGGTTCCTTGGGTCTACCACTACTACCCAAACCCACCACCTCATGTACCTCCTATATCATCACCTCATGTACCTCCTATATCATCTACACCTACTCACTTTTGGGAAGGAGGACATGGTGCTCATCCTGAACCATACCACCAACCATACAATCCATATTACCACGTACCAAGAACCATTCCATCCACCCCACCACCACCAGTACAATCCTGAACCACACCACCCTCACTATGAACATCGGCCACACTATGCAGACCCTGCAAAATGCTCTCGAAATGTCGATTTTCCTACCTTTGAGGGTGACTATCCGGAGTCTTGGATACGCAAGGCCAAAAAATATTTCTCTTTGTATCAAACTCCTGAGGAAGACAAAGTTTTGCTAGCTGAAGTGCACATTTCAGGAAGAGCTGATCAGTGGATTGAAAGTTCAGCTATTGCGACTGCTTCTCTTTCTTGGCCTGAATTCAAAACCATGGTGTGTCAACGTTTTGCAGCCAAATCCAAGATTGAAATTACTGAAACTTTCAGAAATTTGAAACAGTATGGCTCTGTCGACAGTTATATTGATAAATTTGAGGAAACCATGGCCTTAGTTAAACGCAGCAATCCTACATTGACTGGGGATTACTTCTTGGATTATTTTATCTCTGGACTCAAGGACCATATTAAAAGACCTCTGAAATCTCTCTCAATTTACTCCCTGGTGACTGCTTATGAACATGCTTGCAACTATGATGTTATCCCTCGCTCTGCCAACACCTCTTCTGTTCCTTCCAACAGAAAGACTCCCAAAATTCCACCAAAGCAACCTATCAGAGACAACAAGCAGTCCGCTGTCACTCATACAAAATTTTCTGGCAAGTATTTCCGTTGCAACGAACCCTGGGTACCAGGACAAGGCAGAGTCTGTAAAGCTACCAAGCAAGTCTATTTGGTCACAATGGAAGATGAGTCTGAAATCCTAGATGATGCAGCTTACTCTACTCCTCCTAACAGTCCACAGAAGACTGATCAGCAGGATACACATCTGTTATTACACACCTTGGAGGGCACCACTCCTGCTGCTACTACCTTTACACTATATGTTCTATTGGGTACCACACAGTTCTATTGGGTACCACACAGGCCACAGCCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019424