BGIOSGA019428

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Revision as of 02:51, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019428| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019428, complete gene.| tag = OsI_190...")
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Gene Name

BGIOSGA019428

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019428, complete gene.

LocusTag

OsI_19048

Ensembl Transcript ID

BGIOSGA019428-TA

Ensembl Protein ID

BGIOSGA019428-PA

Length

3254

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:9349020..9352273

Sequence Coding Region

9349020..9349072,9349215..9349549,9350502..9350622,9351895..9352273

Genome Context

<gbrowseImage1> name=IndicaChromosome05:9349020..9352273 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:9349020..9352273 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTTATGTCAAGAATCTGTAGATTAAGAAGTGAAAATCTGATGCTAATAAGCCCAGAGGAAGCAGCGAAGGGTAAATGGTACATGGCAACTGCTGCTACCAACCACATGACTCGCGACCAGAGCCTCATCTCCGACCTCAAGCCTGTGACCGGCCGTGTCGTTAGCCGTGGCAACGGCGCAGGGTTGAAGGTGCATGGCAGTGGAGCTGTGAACACAGAGACGGTGGCGATCCCAGACGTGTGGCATGTGCCGGGGATCAACGCGAACCTGGTTTCTGTTCCCCAGCTCTCTCTACTTGGGCTCAACATTTTGTTTGACCGTGGTGGCTGCACTGTCACTAGAGGTAGTGATGGATCTGTAGTTGGCAAAGCGTGTAGATCAGCTTGTGTGCGCGTAGCACTTTCTCTCGTCTTCTCCCGGAGCTCACGCCCTCGCCGCCTCGGCCTCGGCCTCGCCACTGCCGCCGACTCGTCGGAGATGGCCTCCTACCCGGCGTTCCAAGTAAGCCCAGAGGAAGCAGCGAAGGGTAAATGGTACATTGCAACTGCTGCTACCAACCACATGACCCACGACCAGAGCGTCATCTCCAACCTCAAGCCCGTGACTGGCCGTGTCGTTGGTGGTGGCAACGGCGCAGGATTGCAAGTGCATGGCAGTGGAGCTGTGAACACAGAGACGGTGGCGATCCCAGACGTGTGGTATGTGCCGGGGATCAATTGCAACTTGGTTTCTGTTGGCCAGCTCTGTCAACTCGGGCTCGAAGTTTCGATTTTCCGAGGTGTCTGCACCGTCACTAGAGCTAGTGATGGATCTGTAGTTGGCAAAGCGCATAGATCAGGTGCAGTCTATGAGGTGGAATTCCTCAAAGTTCCGCTTAATTAG</cdnaseq>

Protein Sequence

<aaseq>MAFMSRICRLRSENLMLISPEEAAKGKWYMATAATNHMTRDQSLISDLKPVTGRVVSRGNGAGLKVHGSGAVNTETVAIPDVWHVPGINANLVSVPQLSLLGLNILFDRGGCTVTRGSDGSVVGKACRSACVRVALSLVFSRSSRPRRLGLGLATAADSSEMASYPAFQVSPEEAAKGKWYIATAATNHMTHDQSVISNLKPVTGRVVGGGNGAGLQVHGSGAVNTETVAIPDVWYVPGINCNLVSVGQLCQLGLEVSIFRGVCTVTRASDGSVVGKAHRSGAVYEVEFLKVPLN</aaseq>

Gene Sequence

<dnaseqindica>1..53#196..530#1483..1603#2876..3254#ATGGCGTTTATGTCAAGAATCTGTAGATTAAGAAGTGAAAATCTGATGCTAATGTTTTGCCAACAGTCTAAATTTCCTTCAGTGATTAACGATTATTGTTTTTGTGCACTAATGTAGCTAGCCTGTACCTTCTTGATTGACATTCATTCCTGAATCAAGTCCTAACCTGCTACTGTTGCTTGTTACTATCTCCAGAAGCCCAGAGGAAGCAGCGAAGGGTAAATGGTACATGGCAACTGCTGCTACCAACCACATGACTCGCGACCAGAGCCTCATCTCCGACCTCAAGCCTGTGACCGGCCGTGTCGTTAGCCGTGGCAACGGCGCAGGGTTGAAGGTGCATGGCAGTGGAGCTGTGAACACAGAGACGGTGGCGATCCCAGACGTGTGGCATGTGCCGGGGATCAACGCGAACCTGGTTTCTGTTCCCCAGCTCTCTCTACTTGGGCTCAACATTTTGTTTGACCGTGGTGGCTGCACTGTCACTAGAGGTAGTGATGGATCTGTAGTTGGCAAAGCGTGTAGATCAGGTGCGATCTATGAGGTGGAATTCCTCAAAGTTCCGCTTAATTAGCACCAGAAATTCCTCGCTGCAGTATCAGTTGTGGTAGTCAGACTCATATGGTGGCTAATATCGCCTACTCTATCTAATGCTTGTTGGGTTAGAACTTAAGTGGCACCTTTCAGTTGTTAGTTAAGGATCTGGAGGTTTTTCTGAATGTAAAAAGTGAAAGAAGGATGATGTTGGTTATGTCGCTGGCTATGAGCAGAACTGATGAGTTTACCATGTTGGATTGACCTTGTCTTTTACCACTGTTGTTAAGTTCCTGTAGCCCGTTGGGCTGTTCATATCCATCGACTTGCAATTGTTATTCCAGTTTCAGTCTTCCTGCATCGCTGAATTATGTCTGATTATCTTTGCAAGATTCTCTCCCGTCGACCAAATCTCCATTCATGTTGCATGGTAGTATGGTACATGATAGAGTTCCATCGGTAGTCCTAAAATGAATAAGCCAAAGCCAAAATTTAAATTTTAAAATTTAATTTTGAAGTTGGATTTAAGGTATTTTTAACATAATTTTTTTAGCTTTGGCTTTTAAGTTGCTAAGATTATTTATACATATAAGTTTTAGATGCAAAATTACCTTTTTTTTATCTCTAATAAACTGTTACTCCTGTCTCAATTCTCCACGTTTGGGGTAAAAATGGGACGTGTATTTTTCGTCCGTCCACCTATATCAATTATTCAATTCATGGCAAAATTTGGTCAGAGGAAAACACTAATTACTCCCAAAAATAAAAGGAATAATAATTGCCCTTCAAAAGTTACTCCGTAATACTGGAGTAATAGCAATAATAACCCTTCAAAAAAAATTAATAATAGCAATAATACTCCCTATGCCAACCGGGGCCCACCAGGAGGAGTCCACGAACCACGATACATAGGGACCCGATACATATGTGTGTTGCGGTGTGAACCAGCTTGTGTGCGCGTAGCACTTTCTCTCGTCTTCTCCCGGAGCTCACGCCCTCGCCGCCTCGGCCTCGGCCTCGCCACTGCCGCCGACTCGTCGGAGATGGCCTCCTACCCGGCGTTCCAAGTGTAATGTGCCCTCTCCCCTCCCCCTCCTCTTCCTAGCTCAACTCCTGCACACGTGCTCTGTACATATGAGCTTGATTCTTTATCTCGTCGTTTTCTTTGATCGATCTGGACCCATCTTTGTTTGGTGGATTGTGCACTGGTTTCATGTTCAATTTCATTTCTTGGAAGATGCTGTGCAAGATGGAGTAATGCTTTGGGATTTGAGGATTTATTGGGAACACCTCCCTACTTCTTTTGTTTCCCCTTCACATTATAATGGGTTTTAGGTTTAAGAATTTTTAGATCTGGACATGGTCTTACATGATTAAAATATGGGTAAATAGCATAGAATCATTTGATGCATCTTTGGTGTGCCATATGTGGTATTGCATTATTTGTAGTAGCACTTTCAAGGTTTCAATTTGTAGGGGTAACTACACCATTAAAACCCTAGATCTGTGAGATTTTAAGGTGTTTTATGTCACGAATTTGTAGATCTGATCATTTTCACAGAACCACATAACCCTAGATCTGTGAGTCTTATTGGGTTTTAGTTAATGATTTGAACATCTGGATATGAACAGCAATAATTAAAATTTGGGCAAAGTAGCAAGTGTTGTATCTTTGTCTACTTTTAGGGTAGCTTGAATGGCAACGCATTCCTTTGCTGTTGCATAAACCTAACCAAAACCCTAGATTTCTGATACTCTAATGGGGTTCACATCAAGAATTTGTAGATCTTGGATGTGAAGAATCTGATGCTAATGTTTTGCCAGCAACCCCTGACCGTCTGACACTAAAATTTCATCAGTGATTACCATTCTTGTGAACTAATCCAGCTAGCCTGTGCCATTCTTAGATTGCTTACACTGCATTCGCTTGTAGATTTGTCTGATTCTTATGGGCTATAGTTAATAATTTCTGAATCTGAACATGAACACGAATGATTGAAATCAATGTAAAGTAGCAAGTGATGTATTTTTTGGGCAGCATCAATGGCAGTACATTCTTTGCGGTAGTGTTTATCAAAACGTCAACTCTTAGGAGTGCATAAAGCCACCCAAAAGCCTATATTCCTGAGATTGTAATGGTGTTTATGTCAAGAATTTGTTGATTAAGAAGTGACATCTGATGCTAATGTTTTGCCAACAGTGTACCGATTGATACTAAATTCCTTCAGCGATTAAAGATCATTGTTTTTGCAAACTAATGTAGCTAGCATGTACCTTCTTGATTGGCATTCACTCCTAAATCAAGTCCTAACCTGCTACTGTTGCTTGCTACTATCTCCAGAAGCCCAGAGGAAGCAGCGAAGGGTAAATGGTACATTGCAACTGCTGCTACCAACCACATGACCCACGACCAGAGCGTCATCTCCAACCTCAAGCCCGTGACTGGCCGTGTCGTTGGTGGTGGCAACGGCGCAGGATTGCAAGTGCATGGCAGTGGAGCTGTGAACACAGAGACGGTGGCGATCCCAGACGTGTGGTATGTGCCGGGGATCAATTGCAACTTGGTTTCTGTTGGCCAGCTCTGTCAACTCGGGCTCGAAGTTTCGATTTTCCGAGGTGTCTGCACCGTCACTAGAGCTAGTGATGGATCTGTAGTTGGCAAAGCGCATAGATCAGGTGCAGTCTATGAGGTGGAATTCCTCAAAGTTCCGCTTAATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019428