BGIOSGA019443

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Revision as of 02:51, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019443| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019443, complete gene.| tag = OJ1384_...")
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Gene Name

BGIOSGA019443

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019443, complete gene.

LocusTag

OJ1384_A02.2

Ensembl Transcript ID

BGIOSGA019443-TA

Ensembl Protein ID

BGIOSGA019443-PA

Length

6011

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:9926197..9932207

Sequence Coding Region

9926197..9926273,9926393..9926542,9926760..9926900,9927207..9927369,9927450..9927643
,9927723..9927918,9928011..9928088,9928482..9928711,9929123..9929237
,9929427..9929501,9929581..9929721,9929858..9930061,9930135..9930296
,9930512..9930567,9930648..9930772,9930865..9930987,9931726..9931856
,9932076..9932207

Genome Context

<gbrowseImage1> name=IndicaChromosome05:9926197..9932207 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:9926197..9932207 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGTTCGGCGGGTTCTTCGTGGACGAGAAGGCGGCGCGGGTGGAGAACATCTTCCTCGAGTTCCTCAGGCGGTTCAAGGAGGCGGATGCGGCGGAGGCGTTCTACGAGACGGAGCTGGAGGCGATGCGGTCGCGGGAGTCCACCACCATGTACGTCGACTTCGCCCACGTCATGCGATTCAACGACGTCCTCCAGAAGGCCATCTCCGAGGAGTATCTCAGGTTCGAGCCGTACCTCCGGAATGCGTGCAAGAGGTTTGTGATGGAGCAGAGGACTGGCGAGAACCGTGCACCAATCATCTCTGATGATAGCCCTAACAAGGACATTAACATTGCCTTCTACAACATACCAATGCTGAAGAGGTTGAGGGAGCTTGGAACAGCAGAGATTGGTAAGCTCACGGCTGTAATGGGGGTGGTTACACGGACAAGTGAGGTCCGGCCTGAGTTACTGCAAGGCACCTTCAAGTGCCTTGACTGTGGAAATGTTGTAAAGAATGTTGAGCAGCAGTTCAAGTATACTGAGCCAATAATATGTGTCAATGCAACATGCCAAAATCGATCAAAATGGGCCCTTCTCCGACAAGAGAGCAAGTTCACAGATTGGCAGCGGGTCAGGATGCAGGAGACATCAAAAGAAATACCTGCTGGTTCACTACCACGCTCCCTGGATGTCATTCTGAGGCATGAGATTGTTGAGAAGGCTAGAGCTGGAGACACGGTCATATTTACTGGAACTGTTGCTGCTGTTCCTGATGTTATGGCTCTAACTTCACCTGGTGAGAGAGCAGAGTGTCGCCGGGAGGCTCCTCAGCGAAAGAATGGGTCTGGTGTCCAAGAAGGTGTCAAGGGCTTGAAATCACTAGGAGTACGAGATCTGTCATATCGCCTTGCTTTTGTAGCAAACTCAGTGCAGGTGGCGGATGGAAGGAGAGAAGTCGACATCCGGGACAGGGACATAGATGGAGATGACAGCGAAAGACAGAAGTTCACTGAAGAAGAGGAAGATGAAGTTGTTAGGATGAGGAACGTTCCTGATTTTTTCAATAAGATAGTTGATAGCATATGTCCCACTGTCTTTGGGCATCAAGAAATTAAGAGAGCAATCCTTCTCATGCTTTTGGGTGGTGTTCACAAGATAACACATGAAGGGATAAACCTTAGAGGTGACATCAATGTCTGTATTGTTGGTGATCCAAGTTGTGCGAAGTCTCAGTTCTTAAAATATACCGCTGGTATTGTTCCACGATCTGTTTACACATCAGGGAAGTCCTCATCTGCTGCTGGTTTGACAGCAACTGTTGCTAAAGAACCAGAGACTGGCGAATTTTGCATTGAGGCAGGAGCACTCATGTTAGCTGATAATGGCATCTGCTGCATTGATGAATTTGATAAAATGGACATCAAAGATCAGGTTGCTATACATGAAGCAATGGAACAGCAAACCATTAGCATAACAAAAGCAGGAATACAAGCAACTTTGAATGCAAGGACTTCAATTTTGGCAGCAGCAAATCCCACAGGAGGGCGTTATGACAAGTCAAAACCACTCAAGTATAACGTGGCATTGCCTCCAGCTATTCTTTCAAGATTTGATCTGGTATACATAATGATCGATGAGCCTGATGAAAACACTGACTACCACATTGCTCATCACATTGTGAGGGTCCATCAGAAACGTGAAGAAGCACTTGCCCCTGCATTTAGCACGGCAGAATTGAAACGTTACATTGCTTTTGCGAAGTCCTTGAAACCTCAGCTGAGTTCTGAAGCAAAGAAAGTTCTGGTTGAATCATATGTTACCCTTCGTAGAGGAGATAGTACCCCTGGTACTAGGGTTGCTTATAGGATGACAGTTAGGCAACTAGAGGCATTAATCAGGCTTTCAGAAGCTATTGCCCGAAGTCATTTGGAAAGAGTTGTTCTCCCAGCCCATGTTCGCATGGCAGTTAAATTGCTCAAGACATCCATCATCAGCGTGGAATCAAGTGAAGTTGATCTCTCTGATTTCCAAGATGCTGATGATGGCACAAATGTACCAGCCGATAATGATGCTGGTCAGCCAACAGAAATGGATGCTGCTCCTCAACAAGACGGTCCAGAAAATGAGCAAGCGGCAGATACTGGTAAGAAGAAGTTGGTTATAACCGAAGAACATTTCCAGAGAGTCACGCAAGCTTTAGTTATGAGACTACGGCAGCATGAAGAGTCTGTCACGAAAGATGGAGATGGTCTGGCTGGCATGAAGCAAGGGGATCTGATAATTTGGTATGTTGAGCAGCAGAATGCCCAAGGAGCCTATAGTTCTACAGCAGAGGTGAAGGAAGAAGTGAAGTGCATCAAGGCCATCATAGAGAGGTTAATACAGAGGGATGGCCATCTCATAGTGATAGACGAAGGAGCAGCCCCAGCGGCTGACGACGGTGCTGCACGAAGAACATCAGAGAGCAGAATCCTGGCAGTTAATCCGAACTATGTCATCGATTAA</cdnaseq>

Protein Sequence

<aaseq>MEAFGGFFVDEKAARVENIFLEFLRRFKEADAAEAFYETELEAMRSRESTTMYVDFAHVMRFNDVLQKAISEEYLRFEPYLRNACKRFVMEQRTGENRAPIISDDSPNKDINIAFYNIPMLKRLRELGTAEIGKLTAVMGVVTRTSEVRPELLQGTFKCLDCGNVVKNVEQQFKYTEPIICVNATCQNRSKWALLRQESKFTDWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEKARAGDTVIFTGTVAAVPDVMALTSPGERAECRREAPQRKNGSGVQEGVKGLKSLGVRDLSYRLAFVANSVQVADGRREVDIRDRDIDGDDSERQKFTEEEEDEVVRMRNVPDFFNKIVDSICPTVFGHQEIKRAILLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTAGIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIKDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALPPAILSRFDLVYIMIDEPDENTDYHIAHHIVRVHQKREEALAPAFSTAELKRYIAFAKSLKPQLSSEAKKVLVESYVTLRRGDSTPGTRVAYRMTVRQLEALIRLSEAIARSHLERVVLPAHVRMAVKLLKTSIISVESSEVDLSDFQDADDGTNVPADNDAGQPTEMDAAPQQDGPENEQAADTGKKKLVITEEHFQRVTQALVMRLRQHEESVTKDGDGLAGMKQGDLIIWYVEQQNAQGAYSSTAEVKEEVKCIKAIIERLIQRDGHLIVIDEGAAPAADDGAARRTSESRILAVNPNYVID</aaseq>

Gene Sequence

<dnaseqindica>1..77#197..346#564..704#1011..1173#1254..1447#1527..1722#1815..1892#2286..2515#2927..3041#3231..3305#3385..3525#3662..3865#3939..4100#4316..4371#4452..4576#4669..4791#5530..5660#5880..6011#ATGGAGGCGTTCGGCGGGTTCTTCGTGGACGAGAAGGCGGCGCGGGTGGAGAACATCTTCCTCGAGTTCCTCAGGCGGTAAGGCCGGAGCCGTCTCCTTCCATTCCATTTCTAGGGTTTAAGCGGGGTTCCGGTTCGTCTGACGCGTGAGGTGGGGGATTATTTTATTTTATTTTTGTTGAAACTTGGATCTGTAGGTTCAAGGAGGCGGATGCGGCGGAGGCGTTCTACGAGACGGAGCTGGAGGCGATGCGGTCGCGGGAGTCCACCACCATGTACGTCGACTTCGCCCACGTCATGCGATTCAACGACGTCCTCCAGAAGGCCATCTCCGAGGAGTATCTCAGGTGAGATTTGATTTGATTTGAAATTTTTTTTTTGGTGGGGAGTTCAGATTGGGAAATTTTGGGATCTGTCCCTGGATTTGCTCGGATTTGTTCAGAGAACTCGGTTGATGTGTACTTAGCACAAATAGAATTTTTTTCCTAGAAAAAATACAAATTAATTTGCTCATCTGTGACGACAATTTGGAACTGACTGCTTATGTGGATTTCATTGCATCAGGTTCGAGCCGTACCTCCGGAATGCGTGCAAGAGGTTTGTGATGGAGCAGAGGACTGGCGAGAACCGTGCACCAATCATCTCTGATGATAGCCCTAACAAGGACATTAACATTGCCTTCTACAACATACCAATGCTGAAGAGGTCCGCACTTGCTCCTCCAGGTGTAACAGTTTTTTTTTCCCCGTAAAATTAACTCTGGAAATAACAGTTATCTGACGGCAAATGAACGAATTCTGCAAATGTCCTGAAATTCACTACAAAAGTGTGATATATACATATATTCAAGGGTGGGGCTCATTGCCCCTGGAATTTCATGTTAGTACGTTTCCCACATTTGGTAGAAAATTATGTCTCACTTTTTATCTTGCATTTCTAATTTGTCATAGGTTTTATGCTAAATTGTATGATGGTTGCCATAACAATTGACTTAAATTGTTGTTGTAATAGGTTGAGGGAGCTTGGAACAGCAGAGATTGGTAAGCTCACGGCTGTAATGGGGGTGGTTACACGGACAAGTGAGGTCCGGCCTGAGTTACTGCAAGGCACCTTCAAGTGCCTTGACTGTGGAAATGTTGTAAAGAATGTTGAGCAGCAGTTCAAGTATACTGAGGTTGTAACTGTGAACCTTATGTTCTACTTTTTTCTCTCATGCAATGTGTCTAATGAAAGGTTTCTGCTCCTTAACTTCAGCCAATAATATGTGTCAATGCAACATGCCAAAATCGATCAAAATGGGCCCTTCTCCGACAAGAGAGCAAGTTCACAGATTGGCAGCGGGTCAGGATGCAGGAGACATCAAAAGAAATACCTGCTGGTTCACTACCACGCTCCCTGGATGTCATTCTGAGGCATGAGATTGTTGAGAAGGCTAGAGCTGGAGACACGTGAGGAACTCTTGCTGGAACTGCTTTGTACCCACTGGATTGGCTTCACATTAAAGTATTCTGTTTCGGTCATTTTCAGGGTCATATTTACTGGAACTGTTGCTGCTGTTCCTGATGTTATGGCTCTAACTTCACCTGGTGAGAGAGCAGAGTGTCGCCGGGAGGCTCCTCAGCGAAAGAATGGGTCTGGTGTCCAAGAAGGTGTCAAGGGCTTGAAATCACTAGGAGTACGAGATCTGTCATATCGCCTTGCTTTTGTAGCAAACTCAGTGCAGGTATGACCTCTTTCCAGCAATAAATATCGATCTGGTTAGCTTGGTTATAATATTTTTATTACAAGGTTAACCTTTCTCTTTAATGTTATTAGGTGGCGGATGGAAGGAGAGAAGTCGACATCCGGGACAGGGACATAGATGGAGATGACAGCGAAAGACAGAAGTTCACTGTAAGTTCAATTCAGACTCGAGACTAGTTACTCTGTTTCGAAGAAGGAAAAGGGACTAGCCTTGTAAAAAGAACTATGAGAAATTCTGTTTACATGGTATTCGAACATTCTGTTGCATGCTAGCAGGCTGGCATGGATAGGTGTAACCATACCAGCATCCTTTTTCTATTTTTTTGACAATGAGTATCATTCAAGCTCCCTAAACTTTTGCATGATCCTGGTGCACTGTTGATTTAGTGTGTTACATATTCATGTAAGGATGTTAGATCATGAAATGGTTATCATTCCACTTTTTTGTTTTTGTGTATTATATTCTTTATTTTTGATCATATAGTTTTTTGTCATCAAAGTGTTTATATTATTAATTATCTCCCTCCCCCCTCTCTCTTACAGGAAGAAGAGGAAGATGAAGTTGTTAGGATGAGGAACGTTCCTGATTTTTTCAATAAGATAGTTGATAGCATATGTCCCACTGTCTTTGGGCATCAAGAAATTAAGAGAGCAATCCTTCTCATGCTTTTGGGTGGTGTTCACAAGATAACACATGAAGGGATAAACCTTAGAGGTGACATCAATGTCTGTATTGTTGGTGATCCAAGTTGTGCGAAGTCTCAGTTCTTAAAGTAAGCTTCTCATTGTATTCTCATTGTCATGATTCTTATTTTCTTTTTCTGTGATGAATAAAATTTAAGTTCCATCATTCAATGTTGTCATTCTGGGATATATAAAATCTATTCTGCTGCTTCACCAGATCATATGTTAGTGTGCATAAACGACCATTGCTTTCTGATAAGGGTCCCTCAGCATGATGCAATACATCTTGATTAGTCTACTAGTTGAATTTAAGTTACTATAAGCTTTTTAACAATGTTTTTCTGAATGATATTTATGGGTTGACAACTTGACATAAAATCCAGAAGTTGCTCATGTAATTTTGTTCTTGGATTGGACTTCCTATCTTGTTATAAGTTCCATTCATCTTAATGAAATTTATTCATGAATCATCACAAATGTGCTATTAATCCAATCCTCAGATATACCGCTGGTATTGTTCCACGATCTGTTTACACATCAGGGAAGTCCTCATCTGCTGCTGGTTTGACAGCAACTGTTGCTAAAGAACCAGAGACTGGCGAATTTTGCATTGAGGTATTATCAAAATTTTGCGATTCCATCCATTTGTATTGCTAATACATATTTAGAAGTGCACCTTTGCTTTGAATTGCATGCTTCAACTAAATTGAACTCCAATGAGCTTGGATGCACTTTGTGTGCAATCTTCCTAGTTCTTCTGTTCTATTGCCTTACCTCCTCTGCTGCTACTGGTTATTTTTGCAGGCAGGAGCACTCATGTTAGCTGATAATGGCATCTGCTGCATTGATGAATTTGATAAAATGGACATCAAAGATCAGGTAGGCTTGCCGACTTTTACCTATTGTTGCCTCTTTTCTTATTGAACGTGAGTGTCCCAATTTCATTTCTCCATTGTAGGTTGCTATACATGAAGCAATGGAACAGCAAACCATTAGCATAACAAAAGCAGGAATACAAGCAACTTTGAATGCAAGGACTTCAATTTTGGCAGCAGCAAATCCCACAGGAGGGCGTTATGACAAGTCAAAACCACTCAAGGTAAGCCTAACAAATTATAAAAAATTGTACTTCCAAGTACTTCTGAAAAACTTTTGCATCCCTGTATTTTGTTGACATGTTGTGGTAAAATTTCAGTGCTGAGATCTAATATTTCAATCGTTGCAATCCTTATCAGTATAACGTGGCATTGCCTCCAGCTATTCTTTCAAGATTTGATCTGGTATACATAATGATCGATGAGCCTGATGAAAACACTGACTACCACATTGCTCATCACATTGTGAGGGTCCATCAGAAACGTGAAGAAGCACTTGCCCCTGCATTTAGCACGGCAGAATTGAAACGTTACATTGCTTTTGCGAAGTCCTTGAAACCTCAGGTTTATATCTTTATGCACTTCATATATAACTTTCAACTTGTCATCAACTTATAGATGCTTTATGTCAATGCAGCTGAGTTCTGAAGCAAAGAAAGTTCTGGTTGAATCATATGTTACCCTTCGTAGAGGAGATAGTACCCCTGGTACTAGGGTTGCTTATAGGATGACAGTTAGGCAACTAGAGGCATTAATCAGGCTTTCAGAAGCTATTGCCCGAAGTCATTTGGAAAGAGTTGTAAGTAAAATCCTCATTCATATATTGCATGTTTTTTAGATTATGCAGTATGGTGTCTAAATAAATTAACTTAAGTTCAACAATCAGGAATAGTATTATTAGTTGGTTGTGGTGTTAAATTTAAAAGGCTGACATTTGTTCCCTCCCTTTGCATTGGGGTTTTTCACCTTACGGCATAATATTTCTGCTGACTTCATTTGGGATTAATTTCACAGGTTCTCCCAGCCCATGTTCGCATGGCAGTTAAATTGCTCAAGACATCCATCATCAGGCAAGTTTCTTGAAATTGCTCAAGACATCCATCCATCATTTGCATGATGATTTGCTAACAAAATCTTATTAATTGTGCAGCGTGGAATCAAGTGAAGTTGATCTCTCTGATTTCCAAGATGCTGATGATGGCACAAATGTACCAGCCGATAATGATGCTGGTCAGCCAACAGAAATGGATGCTGCTCCTCAACAAGACGGTCCAGGTAGGTTTCCCCTTATTATTAAAATGGCTTTTTTGTGTGTTCTTGCTATTATTCTGATCATTCCGGTACCTTGTTTTTAATGTAAAATGTAGAAAATGAGCAAGCGGCAGATACTGGTAAGAAGAAGTTGGTTATAACCGAAGAACATTTCCAGAGAGTCACGCAAGCTTTAGTTATGAGACTACGGCAGCATGAAGAGTCTGTCACGAAAGATGGTATTGATACTGGATTTTACACTACCTTTCCATTTGTTTTGTTTTGACTTATTCGCTATTTTGTATCCTTACCCTAGCAATTTCCAACTGTAGAAGAAGCATAGTAATATCTGCTTAGGTTCAAATAAGTGAATTAATTTTTACTGCTTATGTCCCATATAAGGAGTAACAAGATCCTTAGTTGTGATTTACTTACATAATTATGAGCAGCATTTCTGAGACATGCTTTCTCTCGAGAACAAATGAAATTACGATCTCGTCTAGATTACAGCTTCCAGAGGTCTAGGTTGGCGAGCAATTCTTTTTAATTGCGTAAATTAATAAATCCTTTGTTTATATTCTAGAAAAACATAATTTGCAATAATTGTCTAGTACTATTGTATTGCTTTAGCTTTTGTTCTTCTCTTACATCTTACTAGAAAGATATATGCATCTTCTTAAAATTGATGTGGAGCCTCATGCAGGCTTGTAGATGCATCAATGTGATTAACTTGTACGCCAACCATTTATACAGTGTAGTAAGCATAAATTGTAGTTATGTCTATTCAGGTTTCACCATGTTGATGTCTCGTTATATTGTTAGGACTTAATGCTATCTAATTCCGCTCCTGTATAAGTCATTGCTTTTAGTTCATCTTGTGCCGCCCTAAGTGTTTCCTTTTATGAACAAGGATGATCCTTGTCAGACCTCCAGCTGATATAGATGTCAAACTGACATGTTCCAACATTGAATTGCAGGAGATGGTCTGGCTGGCATGAAGCAAGGGGATCTGATAATTTGGTATGTTGAGCAGCAGAATGCCCAAGGAGCCTATAGTTCTACAGCAGAGGTGAAGGAAGAAGTGAAGTGCATCAAGGCCATCATAGAGGTAAAAGCCTTCATTGATCTTATCATCTATGTATCAATTTGCCTGCATTGATCCTATCAGTTCAACAGTATGGTATGGAAATTAACCTAACAAGACTACATTTAAGGCATTTAGCTGCATCAATTTGCCTGCACTGCAAGCTCAACATTGACCATTTATATTGAGCATTACCTCAGCTTTCCATGTTGCTAAAAGTTATCAATCGATTTGCAAATGCAGAGGTTAATACAGAGGGATGGCCATCTCATAGTGATAGACGAAGGAGCAGCCCCAGCGGCTGACGACGGTGCTGCACGAAGAACATCAGAGAGCAGAATCCTGGCAGTTAATCCGAACTATGTCATCGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019443