BGIOSGA019462

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Revision as of 02:51, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019462| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019462, complete gene.| tag = OJ1115_...")
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Gene Name

BGIOSGA019462

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019462, complete gene.

LocusTag

OJ1115_B04.9

Ensembl Transcript ID

BGIOSGA019462-TA

Ensembl Protein ID

BGIOSGA019462-PA

Length

4681

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10317419..10322099

Sequence Coding Region

10317419..10317518,10318677..10319636,10320634..10322099

Genome Context

<gbrowseImage1> name=IndicaChromosome05:10317419..10322099 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:10317419..10322099 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCAGCACTCTTTCCGCCTCCAAACCACTGGAGCAGCCGCAGCAAGCAACCTCTTCTTCTTGTTCTTGCGCCGCCTCACAAATCACAATCCCCCCGGAAAAGAGAAAATGTCATCTAGTTATGATGAAGGGAAAAGTTTTGCTCGGAGGGACCTTTTGCTTAAGATCCAATCTGAAGTGCAAAAATGTTGGGAAGAGAACAAGGTTTTCGAAGCAAAGGCTGGTGATACACCTCCAAGCCCTGGTGAAAAATTCTTTGGGAATTTCACATACCCATACATGAATGGCATGCTACATTTAGGCCATGCCTTCACACTATCGAAGCTTGAGTTTGCTGCAGCATACCACAGACTCCATGGCTCAAATGTCCTTTTACCCTTTGCTTTCCACTGTACTGGAATGCCAATCAAGCCATCAGCTGATAAGCTTGGTAAAGAGATACAACAGTATGGAAATCCTCCAGTGCTCCCACCTGCCAACAAAAACTCAAAATTTGAGTTGACAAATGATAGAATTTATGGCCAGACCACTGCTAGTGCCCAAGATAAGTACAGGAGCAAGAGATCTAAGTCAGTAGCAAAATCTGGCTCATACAAATCCCAGTGGGAGATCATGAGGAGCTTTGGCATTGCTGATGGAGAGATTGTGGAATTTCAAAATCTTCATCATTGGTTAAGCTACTTTCCTCCGCTGGCCATGGAAGATCTCGAGGATTTTGGGCTAAGTTGTGATTGGAGGCGTTCATTTATAACCACTGATATGAATCCATTTTATGATGCTTTTGTCCAATGGCAGATGAGAAAGTTGAAGAAAATGCACAGGATTGTCAAAGGCAAGCAGTACATGATCTACTCCCCATTAGATCGCCAACCTTGTCTTGGCCATGATCGGGCATCAGGTGAAGAGGTCGAGCCACAGGAATATGTACTGATTAAGATGAAGGTTATTCCGCCATTTCCACCCAAGTTGATGGTCCTGGAAGGCAGAAATGTGTATTTGGCCGCAGCAACACTCAGACCTGAGACAATATATGGTCAAACCGGGGGCGAAGCTACAGCAAGAGCTGCACGTAATCTTGCTTACCAGATGCTATCCAGAGTTCCAGAAAAGCCAACTTGCTTAGTTGAGCTGCTTGGCACAGATCTGATTGGTTTGCCATTGAAGTCACCTCTTGCCTCCAACGAAGTCATATATGTTCTTCCAATGCAGAACATATTAGTAGATAAAGGCACTGGAATTGTGACTAGTGTTCCAAGTGATACACCGGATGATTTCATCGCATTACAAGAGTTGGTAAAAAATCAAGATTTTAGAGTGGCATGTGGAGTGAAAGATGAGTGGGTTTTCCCCTTTGAAGTTATACCAATAATTGATGTTCCAAGTTTTGGAAATAAATCAGCAGAGAAGGTTTGTTTTGATCTGAAAATGGATAGTCCAGATGAGAAAGAAAAACTTGCTAAAGCAAAAGAGATCACATATTTGAAAGGCTTCGATGATGGCATAATGATTGTTGGTGAGTTTAGCAACCGAAAGGTTCAAGAAGTGAAGCCATTGATAAAGGAAAAGCTATTGAAGGCAGATATGGCTGTTTTGTACTATGAGCCTCAGGAGAAGGTCATTTCCAGGTCAGGTGATGACTGTGTTGTTGCTCTCACAGATCAATGGCTCATAACATATGGTGAGGCTGAATGGAAACAAAAGGCTATAGAATGCTTGGACAAGATGAATACATTCTCAGTTGAAGCCCGTAATAGTTTTGAGCACACATTGAACTGGCTGACTTCACGGGCCCGTTCATGTTCTTTTGGACTAGGTACTCGGATTCCATGGGATGAGAAGTTTCTTGTAGATTCTCTTTCTGATTCAACTTTGTACATGGCCTACTACACCATTGCACATATACTGCAAAATGGTAACATTTATGGATCTGACAACTCTTATATAAGGCCAGAACAAATGACTGATGAAGTATGGGATTATGTGTTCTGTAATGGTCCGGCACCAAAAACTAGCATCCCCTCTACTGTTTTGACAAAAATGAAGCAAGAGTTTGAGTACTGGTATCCCTTCGATCTTCGAATTTCAGGTAAGGACCTTATGCAGAACCATCTGGCCTTCTGTATCTTCAATCACACAACACTTCTTCCAAAACATCATTGGCCCCGCGGATTCCGTTGCAACAGACACCTTCTGCTTAATTCTGAGAAGATGTCTAAGTCCACAGGAAATTTCAGGACCCTTCGACAGGCCATAGAGGAATTTTCGTCTGATGCCACTAGGTTTGCACTTGCTGATGTTGGTGACGGTATGGATGATGAAAACTTTGTCTCTGAGACTGCAAATTCTGCTGCACTAAGACTGACAAAAGAAATTTCATGGATGAAAGAAGTTTTTGATGATAAATCTTCCTTTCGACTTGGGCCACCATCTACTTATGCTGATCGCGTCTTTGCTAACGAGATAAACTTTGCCATCAAAGACACGGAAATAATTATGATGCTTCCATGTTTTGAGATGCTCTAA</cdnaseq>

Protein Sequence

<aaseq>MSQHSFRLQTTGAAAASNLFFLFLRRLTNHNPPGKEKMSSSYDEGKSFARRDLLLKIQSEVQKCWEENKVFEAKAGDTPPSPGEKFFGNFTYPYMNGMLHLGHAFTLSKLEFAAAYHRLHGSNVLLPFAFHCTGMPIKPSADKLGKEIQQYGNPPVLPPANKNSKFELTNDRIYGQTTASAQDKYRSKRSKSVAKSGSYKSQWEIMRSFGIADGEIVEFQNLHHWLSYFPPLAMEDLEDFGLSCDWRRSFITTDMNPFYDAFVQWQMRKLKKMHRIVKGKQYMIYSPLDRQPCLGHDRASGEEVEPQEYVLIKMKVIPPFPPKLMVLEGRNVYLAAATLRPETIYGQTGGEATARAARNLAYQMLSRVPEKPTCLVELLGTDLIGLPLKSPLASNEVIYVLPMQNILVDKGTGIVTSVPSDTPDDFIALQELVKNQDFRVACGVKDEWVFPFEVIPIIDVPSFGNKSAEKVCFDLKMDSPDEKEKLAKAKEITYLKGFDDGIMIVGEFSNRKVQEVKPLIKEKLLKADMAVLYYEPQEKVISRSGDDCVVALTDQWLITYGEAEWKQKAIECLDKMNTFSVEARNSFEHTLNWLTSRARSCSFGLGTRIPWDEKFLVDSLSDSTLYMAYYTIAHILQNGNIYGSDNSYIRPEQMTDEVWDYVFCNGPAPKTSIPSTVLTKMKQEFEYWYPFDLRISGKDLMQNHLAFCIFNHTTLLPKHHWPRGFRCNRHLLLNSEKMSKSTGNFRTLRQAIEEFSSDATRFALADVGDGMDDENFVSETANSAALRLTKEISWMKEVFDDKSSFRLGPPSTYADRVFANEINFAIKDTEIIMMLPCFEML</aaseq>

Gene Sequence

<dnaseqindica>1..100#1259..2218#3216..4681#ATGTCGCAGCACTCTTTCCGCCTCCAAACCACTGGAGCAGCCGCAGCAAGCAACCTCTTCTTCTTGTTCTTGCGCCGCCTCACAAATCACAATCCCCCCGGTATGCAAATGCAATTCCTCCTTGTTCAAATGTTGAGGATGCGATACTTCATTTTTGTTTAAATTTTTTTAGGGTTGAGGGGATTATGTCAAGTACTGTAGTAACATTTTGGTTTGCGTTTTTTTTTCCATGTGCTTCATCAGGGTGTAAATGAACTAAGGGGAAGGAAGGGTGCTAGACTGGAGATTGCATTCTGGTCATATACCAAGGTACTAGATTTTTGCTTTGATTGTGATAAATCTACAGGAACGAATTAGATTGTAGATAAGAATCACAGTTTTCAATAGCCTCTGTTTGCCTGCAAATTATCATTTAAATATCAAATCTCGTTGTAGCAAACTTGGAATAATCCCATACCTTCAATGGTTTTTGAAAAACCAACCTTTTTGCATGTATTTCATCAGAAAATGTTTAAACTCAGGTCTGAGTTATTATTTCAGAAATTTTAGTGAATTAGATATGAAAAGTGAAATAGGGACGAGATGGCTAATATTGAAGTAGATATGGACTATCCATATAAACGAATAGATATTTCAAAATTGAAATTCGAATATAATCTTGCCATTAAAACTAGACTACCAAATGTGCCGGGGATGGGGATCTGATGGTTTACAGCAGTGTGGCCAACTTCCAAAAACAAAAGCTTTAAAATTTAAAAAGCATGACAACCTGAAACATTTCCTGAAAGGCATGTCTTTTCTGTGATAGTTGTGATTTAGTGAGAACTTTCAACAAATTTGCTCTGTACATATTATTGAATCAAAATAATCTACTCATAGATGGTATTGTCTGTTACCCTCCTTGCTTTGTTGGATTTTGCTACTTTGCATCAACTATAGCTTTCCATATACTTCACAAGATAACTATTTATCTGATCTGTTTCATGCGACTTTCTTTGTCTTGCATTATGCAAATAATTCTAACTTTTTTGCCACAATATTCTGTTATTCTGTTGTTTACTCTCAGTAACCACTTTATTTTCTATCACAAATCAAAGCTGTTCACAAGTACAGTTTATTTGGGGGTTTTGCATACTGCATTTTAAATCAATCTACCGTTGGACCATACACTGGATTCGTTTGTAGTTTGTTTCAGGTTTTTTGTACATTACAAAAAATGTTTATTTCTGTATTTAACACCCTTTTGTTGGTTCATTAGGAAAAGAGAAAATGTCATCTAGTTATGATGAAGGGAAAAGTTTTGCTCGGAGGGACCTTTTGCTTAAGATCCAATCTGAAGTGCAAAAATGTTGGGAAGAGAACAAGGTTTTCGAAGCAAAGGCTGGTGATACACCTCCAAGCCCTGGTGAAAAATTCTTTGGGAATTTCACATACCCATACATGAATGGCATGCTACATTTAGGCCATGCCTTCACACTATCGAAGCTTGAGTTTGCTGCAGCATACCACAGACTCCATGGCTCAAATGTCCTTTTACCCTTTGCTTTCCACTGTACTGGAATGCCAATCAAGCCATCAGCTGATAAGCTTGGTAAAGAGATACAACAGTATGGAAATCCTCCAGTGCTCCCACCTGCCAACAAAAACTCAAAATTTGAGTTGACAAATGATAGAATTTATGGCCAGACCACTGCTAGTGCCCAAGATAAGTACAGGAGCAAGAGATCTAAGTCAGTAGCAAAATCTGGCTCATACAAATCCCAGTGGGAGATCATGAGGAGCTTTGGCATTGCTGATGGAGAGATTGTGGAATTTCAAAATCTTCATCATTGGTTAAGCTACTTTCCTCCGCTGGCCATGGAAGATCTCGAGGATTTTGGGCTAAGTTGTGATTGGAGGCGTTCATTTATAACCACTGATATGAATCCATTTTATGATGCTTTTGTCCAATGGCAGATGAGAAAGTTGAAGAAAATGCACAGGATTGTCAAAGGCAAGCAGTACATGATCTACTCCCCATTAGATCGCCAACCTTGTCTTGGCCATGATCGGGCATCAGGTGAAGAGGTCGAGCCACAGGAATATGTACTGATTAAGATGAAGGTTATTCCGCCATTTCCACCCAAGTTGATGGTCCTGGAAGGCAGAAATGTGTATTTGGCCGCAGCAACACTCAGACCTGAGACAATATATGGTCAAACCGGGGGCGAAGCTACAGGTAATCATCGGGGTCAGTAGACCCCAACGATGTTTTGCTAATGTCCAGTACCCCTCTTATTTTACCAGCTATGCCCCCAATGAAGAGCTAAACTAGACCCCAGTGACATCCTTGATTGTTCCATCAAAGAGCAATTCTATACTAGTGGTACCTCATGGTACCTCCTCAAGAACCGTAAAATTGCTCTCCATCAAAGCTCAACTGGTTACTATAGGAACGAGATACTAGCAAGCAGCAAATAGAAAATGAACTAGCAGTTATGATTATACAATGGCCCAATATGCATATACGATTGATATTTGAGCCCATAAATAAGATCGGAAGACACTACTCCACAAATTCCCTGGTTGCATCATCATATTCCTCGTTGTATTGCATCGGCATCGCACGTCCTGACATCATATTTATCATATTTTATTTTATTTCCAGCATAATGGAAGGCAAATAATTAGTGGTTTTGATAATCTTTGATGCATTTGGTGTCTTTTACAGCTTGTAAAATAATCCAATAATGTACATGTTTTAATAATTTTATCGACAGAAGCTGTAATAGGCAAGATGTAACACTACTACAACAGGAGTTGGCTTTATTTTAATAATTTTGTCTCGTAGTATGTAGTCTCTAATTACAAGCTGTAATAATTATGTAGTTTTATTTCCGATTTACTGTTGGATTCCAACCAGCCGTATGGCATTTTTCGCAAAAATTTGATTAATCTTGATCAAATTTTGGTCTACTTTTTTTTATTCAAAAAATAATTCTCGAAGACCATTCAAAATTTCACTCGGAATCTACTTTTGCCCTGCGTGGAAACATCAAAATTGCATGGTTTTCGATCGGTTTTGGTTGAAAACGTAAATCCTGATTAGTACGAATACTGACCGCGGTAACTATTTATCCTGGCTTCGCCCCTGGGTCAAACAAACTGTTGGGTCCTCCTTGATGGAAAGTATGGGCCTTTTGAGATAAATGAAACCGATGTTTTTATATTGACAGCAAGAGCTGCACGTAATCTTGCTTACCAGATGCTATCCAGAGTTCCAGAAAAGCCAACTTGCTTAGTTGAGCTGCTTGGCACAGATCTGATTGGTTTGCCATTGAAGTCACCTCTTGCCTCCAACGAAGTCATATATGTTCTTCCAATGCAGAACATATTAGTAGATAAAGGCACTGGAATTGTGACTAGTGTTCCAAGTGATACACCGGATGATTTCATCGCATTACAAGAGTTGGTAAAAAATCAAGATTTTAGAGTGGCATGTGGAGTGAAAGATGAGTGGGTTTTCCCCTTTGAAGTTATACCAATAATTGATGTTCCAAGTTTTGGAAATAAATCAGCAGAGAAGGTTTGTTTTGATCTGAAAATGGATAGTCCAGATGAGAAAGAAAAACTTGCTAAAGCAAAAGAGATCACATATTTGAAAGGCTTCGATGATGGCATAATGATTGTTGGTGAGTTTAGCAACCGAAAGGTTCAAGAAGTGAAGCCATTGATAAAGGAAAAGCTATTGAAGGCAGATATGGCTGTTTTGTACTATGAGCCTCAGGAGAAGGTCATTTCCAGGTCAGGTGATGACTGTGTTGTTGCTCTCACAGATCAATGGCTCATAACATATGGTGAGGCTGAATGGAAACAAAAGGCTATAGAATGCTTGGACAAGATGAATACATTCTCAGTTGAAGCCCGTAATAGTTTTGAGCACACATTGAACTGGCTGACTTCACGGGCCCGTTCATGTTCTTTTGGACTAGGTACTCGGATTCCATGGGATGAGAAGTTTCTTGTAGATTCTCTTTCTGATTCAACTTTGTACATGGCCTACTACACCATTGCACATATACTGCAAAATGGTAACATTTATGGATCTGACAACTCTTATATAAGGCCAGAACAAATGACTGATGAAGTATGGGATTATGTGTTCTGTAATGGTCCGGCACCAAAAACTAGCATCCCCTCTACTGTTTTGACAAAAATGAAGCAAGAGTTTGAGTACTGGTATCCCTTCGATCTTCGAATTTCAGGTAAGGACCTTATGCAGAACCATCTGGCCTTCTGTATCTTCAATCACACAACACTTCTTCCAAAACATCATTGGCCCCGCGGATTCCGTTGCAACAGACACCTTCTGCTTAATTCTGAGAAGATGTCTAAGTCCACAGGAAATTTCAGGACCCTTCGACAGGCCATAGAGGAATTTTCGTCTGATGCCACTAGGTTTGCACTTGCTGATGTTGGTGACGGTATGGATGATGAAAACTTTGTCTCTGAGACTGCAAATTCTGCTGCACTAAGACTGACAAAAGAAATTTCATGGATGAAAGAAGTTTTTGATGATAAATCTTCCTTTCGACTTGGGCCACCATCTACTTATGCTGATCGCGTCTTTGCTAACGAGATAAACTTTGCCATCAAAGACACGGAAATAATTATGATGCTTCCATGTTTTGAGATGCTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019462