Os11g0701000

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Revision as of 09:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0701000| Description = Class III chitinase homologue (OsChib3H-c)| Version = NM_001075051.1 GI:115486750 GeneID:4351186| Length = 1314 bp| ...")
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Gene Name

Os11g0701000

Description

Class III chitinase homologue (OsChib3H-c)

Version

NM_001075051.1 GI:115486750 GeneID:4351186

Length

1314 bp

Definition

Oryza sativa Japonica Group Os11g0701000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:30536070..30537383

Sequence Coding Region

30536377..30537315

Expression

GEO Profiles:Os11g0701000

Genome Context

<gbrowseImage1> name=NC_008404:30536070..30537383 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:30536070..30537383 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcccaacgccggcgatcatccgccgccaccatcgccgtcttcttcttcctcctctccttgttagcggtgttcttccagccggccgccgcctactaccaccctcaggggaagaggcagaccgtcgccgtcttctggggacgcaacaaggccgagggctcgctccggcaaacctgcgacaccggcgactacaacatcgtcatcatctccttcctcagcgtcttcggccatggcaagtactggctcgacctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagggcgtctacatgctcctctccatcggcggcgacggcgacggctactccctcccttcctccaagtccgccgccgacgtcgcctacaacctctaccactccttcctcggccgcccacgcgccggcatcttccgccccttcggcgacgacaccatcgtcaacggcgtcaacttcttcatcgaccacggccccggcgaccactacgacgacctcgccaaccgcatcaacgactacaaccagaacatccacgaccccatcggcatcatgctgacggcgacggtgaggtgctcgtaccctgacccgaggatgaagaaggcgctggacaccaagctgttcacgcagatccacgtgaggttctacgacgacccgaggtgctcgtacaaccacgcggggctcgccggcgtcatggcgcagtggaacaggtggtcggcgaggtacccaaacagccggatcttcctggggctcgcggcggcgaacgtgacggggaagaacgacatggtcggcgtcggggagctcagccggaagctgctgccggcggtgcagaagacggagagctacgcgggagtgacgctctggaacagctactacgactccaagactcactacggaagatatgtcaagcactgggcttaa</cdnaseq>

Protein Sequence

<aaseq>MASQRRRSSAATIAVFFFLLSLLAVFFQPAAAYYHPQGKRQTVA VFWGRNKAEGSLRQTCDTGDYNIVIISFLSVFGHGKYWLDLSGHDLRDVGADIRHCQS KGVYMLLSIGGDGDGYSLPSSKSAADVAYNLYHSFLGRPRAGIFRPFGDDTIVNGVNF FIDHGPGDHYDDLANRINDYNQNIHDPIGIMLTATVRCSYPDPRMKKALDTKLFTQIH VRFYDDPRCSYNHAGLAGVMAQWNRWSARYPNSRIFLGLAAANVTGKNDMVGVGELSR KLLPAVQKTESYAGVTLWNSYYDSKTHYGRYVKHWA</aaseq>

Gene Sequence

<dnaseqindica>69..1007#tctcatcactgattacacccaacaacaacacaatccaaccatcaaccatactacaccagaacacaacaatggcgtcccaacgccggcgatcatccgccgccaccatcgccgtcttcttcttcctcctctccttgttagcggtgttcttccagccggccgccgcctactaccaccctcaggggaagaggcagaccgtcgccgtcttctggggacgcaacaaggccgagggctcgctccggcaaacctgcgacaccggcgactacaacatcgtcatcatctccttcctcagcgtcttcggccatggcaagtactggctcgacctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtccaagggcgtctacatgctcctctccatcggcggcgacggcgacggctactccctcccttcctccaagtccgccgccgacgtcgcctacaacctctaccactccttcctcggccgcccacgcgccggcatcttccgccccttcggcgacgacaccatcgtcaacggcgtcaacttcttcatcgaccacggccccggcgaccactacgacgacctcgccaaccgcatcaacgactacaaccagaacatccacgaccccatcggcatcatgctgacggcgacggtgaggtgctcgtaccctgacccgaggatgaagaaggcgctggacaccaagctgttcacgcagatccacgtgaggttctacgacgacccgaggtgctcgtacaaccacgcggggctcgccggcgtcatggcgcagtggaacaggtggtcggcgaggtacccaaacagccggatcttcctggggctcgcggcggcgaacgtgacggggaagaacgacatggtcggcgtcggggagctcagccggaagctgctgccggcggtgcagaagacggagagctacgcgggagtgacgctctggaacagctactacgactccaagactcactacggaagatatgtcaagcactgggcttaatttaatcaattaatttaagctcagatcaaccagctataataatctactacagtgcatgcagctcaatcactatcgcagtaatcacggtgtcatgggtttaatgtagtaaactacccccacttaattacatgttgtttgttgttttttgatcttggtctcgagagcaagtgttttttttatttgcacaactctagtgtgtcatatatgcatgtgtgatcgatgtatctgtacttttctttttcccttttttcctttttgcaactgtgtatgtattgatgtataatgaagttgtacatgatgtttaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0701000, RefSeq:Os11g0701000