BGIOSGA019475

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Revision as of 02:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019475| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019475, complete gene.| tag = OsI_191...")
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Gene Name

BGIOSGA019475

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019475, complete gene.

LocusTag

OsI_19151

Ensembl Transcript ID

BGIOSGA019475-TA

Ensembl Protein ID

BGIOSGA019475-PA

Length

5217

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10676725..10681941

Sequence Coding Region

10676725..10676800,10676877..10677950,10680112..10680317,10680431..10680557,10680947..10681018
,10681138..10681330,10681452..10681941

Genome Context

<gbrowseImage1> name=IndicaChromosome05:10676725..10681941 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:10676725..10681941 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTCAGTGGGAGCCCGCCTTTGTGGTCACCTTAAGCTTGTTGTTTTGCATCCATGGTCAACTAGACAATCTTGGTTTCATAAGCATCGACTGTGGATATATCACGAGGCCAAGCTACCCAGATTTCAAGACAAATCTAACATATGTAGCCGATGTGGGCTTCACAAATACAGGGTTTATTCACACTGTTGATGTTGGCAACCTGCAGAGGGATCTTGCACAACGGTACACAACTGTCCGCTACTTTCCCAATGGAACTCGCAACTGCTATACGCTCAAGCAGCTAACACGAGGTGGCAAGTATCTTGTGAGGGCCACCTTTGGGTATGGCAACTACGATGCTTTCAACTCACCTCCTGCCTTTGATCTCTATCTTGGGGCCAACTACTGGGTCAAGGTGAACATTACCAACTCCAGCAGAGCATATGTCCATGAGACGATTGCAGTGTCTCCTTCTGAATTCTTGCAGGTTTGCTTGGTAAACACTGGGTCAGGAACTCCTTTCATCTCAGGGCTTGACCTAAGGTCACTCCCTGCAAATTTTTATCCAGAGGCCAATGTGGCACAATCTCTAGTTTTGCTCAGCTTTTTCCGTGAAACGGTCAGTTTTGGCTTCAATCGCTTCCATTTTGGAACTGATGAGCACCACATTAGGTACCCAGTTGATCGCTACGACCGCTTCTGGCAGAGGTATGAAGACATTCCTGGCTGGGAAGATGTTCCTGACAAAATCAATGGGACAGTCAAGAGCCCCCAAAACGACACCTATGGTGCACCTTCTGATCTTATGCGTAGTGCATCTACTGCGGTGAATGCCTCAAGGATGGACCTGCCATGGAGTTCTGATGCATCCATGGATGTTGGCATCGGCCCCGAGTACATTGTTGTGCTATACTTTGCCGAGGTGCAGGCTATCTCAGATAACTTGTTACGGCAGTTCCTTGTTTCTGTGGATAACACCCCGCTGGCTGCTGCATTCAGCCCACGGCACATGTTGGCTGATGTTTTCTCGGGAACTGTGCTAGGCTCAGACCAGCATAGCATCTCCCTCATTACAACAATAATCTCTGACCTTCCACCTTTGATTAGTGCCATGGAGATATTCTTAGGGCGGACACTGAATGAGTCTTCCACTGGCTCCTCTGATGATGTGCTTCCTGAAGCTGATCCATACAAGAGTCGGAGGTTCAAGTACAAGGAACTCCAAGTCATCACGAATGACTGGAGAAATGTAATTGGGGAGGGTGGATTTGGTCATGTCTATGCTGGTCAATTGGAGGATGTAACTGACGTTGCTGTCAAGGTTGAATCACAAACATCTTTGCGAGGGAATCATAAGCAGTTTCTGGCAGAGGTTCAACACCTGACCAGGGTTCATCATAAGAACTTGGTGTCCTTAATTGGCTACTGTAACGACAAGAAACATCGATGCCTTGTCTATGAATACATGGATGGGGGAACCCTGGAGGGCCGGCTCAGAGGTCGTGAAGATCCACCTGAACCACCCCTTACCTGGCTGCAACGCGTTAACATTGCACTAGGATCTGCCAACGGATTAAATTACCTGCACACGATGTGCAGTCCACGGTTGATTCACAGGGATGTCAAGGCGGGAAACATCCTTCTGACAGCAAACCTTGAAGCAAAGATATCTGACTTTGGGTTGACAAGGCCTTCCATCCATGGGACAGTGGAAACACGCACCATCACCCAACTGGCTGGCACTCCAGGATACATGGACCCAGAATCCCTTCAAGCTAGTCATCCAAGTGAGAGCAACGACGTGTACAGCTTCGGAGTTGTTCTTATGGTGGTCATCACAGGGAGAACAGCGATCGTCACCATCAATGGCACAGAGAAGAACCTTGCACAGTGTGTGCGTGACTGGCTTTCAAGCGGAAGAGGAATCGAGGCTATCGCTGATCCGATGATACGAGATGATTGCAATCTCAGCTCTGTAGAGATGGTGGCACAATTGGCACTGGATTGCACGGAGCCCGCTGGGCAGGACCGGCCAACTATGGCGGATGTTGTGACCACACTGACGGAGAGCTTGCAACTGGAGATGTCGTGGTCGTCGCCGCACTCCATGAGATCCAGCACCACCATCTCATCATCAGCTGGGTTCACCGGTTCAGGGCGTGCTGATCATGACGCCGCTGCTGACTCCATTGCCGTGCTTCAAGTAGAACAGGCCGTCGTGGAAACATCAACAAGGTACGTAACATGCGAATGA</cdnaseq>

Protein Sequence

<aaseq>MSQWEPAFVVTLSLLFCIHGQLDNLGFISIDCGYITRPSYPDFKTNLTYVADVGFTNTGFIHTVDVGNLQRDLAQRYTTVRYFPNGTRNCYTLKQLTRGGKYLVRATFGYGNYDAFNSPPAFDLYLGANYWVKVNITNSSRAYVHETIAVSPSEFLQVCLVNTGSGTPFISGLDLRSLPANFYPEANVAQSLVLLSFFRETVSFGFNRFHFGTDEHHIRYPVDRYDRFWQRYEDIPGWEDVPDKINGTVKSPQNDTYGAPSDLMRSASTAVNASRMDLPWSSDASMDVGIGPEYIVVLYFAEVQAISDNLLRQFLVSVDNTPLAAAFSPRHMLADVFSGTVLGSDQHSISLITTIISDLPPLISAMEIFLGRTLNESSTGSSDDVLPEADPYKSRRFKYKELQVITNDWRNVIGEGGFGHVYAGQLEDVTDVAVKVESQTSLRGNHKQFLAEVQHLTRVHHKNLVSLIGYCNDKKHRCLVYEYMDGGTLEGRLRGREDPPEPPLTWLQRVNIALGSANGLNYLHTMCSPRLIHRDVKAGNILLTANLEAKISDFGLTRPSIHGTVETRTITQLAGTPGYMDPESLQASHPSESNDVYSFGVVLMVVITGRTAIVTINGTEKNLAQCVRDWLSSGRGIEAIADPMIRDDCNLSSVEMVAQLALDCTEPAGQDRPTMADVVTTLTESLQLEMSWSSPHSMRSSTTISSSAGFTGSGRADHDAAADSIAVLQVEQAVVETSTRYVTCE</aaseq>

Gene Sequence

<dnaseqindica>1..76#153..1226#3388..3593#3707..3833#4223..4294#4414..4606#4728..5217#ATGTCTCAGTGGGAGCCCGCCTTTGTGGTCACCTTAAGCTTGTTGTTTTGCATCCATGGTCAACTAGACAATCTTGGTAAGCCCTCTTCTCTTGTATTATGTATAGAGTTGAACTGATTTCTCATATTGATCTTCATATGTTGCTTTGGCAGGTTTCATAAGCATCGACTGTGGATATATCACGAGGCCAAGCTACCCAGATTTCAAGACAAATCTAACATATGTAGCCGATGTGGGCTTCACAAATACAGGGTTTATTCACACTGTTGATGTTGGCAACCTGCAGAGGGATCTTGCACAACGGTACACAACTGTCCGCTACTTTCCCAATGGAACTCGCAACTGCTATACGCTCAAGCAGCTAACACGAGGTGGCAAGTATCTTGTGAGGGCCACCTTTGGGTATGGCAACTACGATGCTTTCAACTCACCTCCTGCCTTTGATCTCTATCTTGGGGCCAACTACTGGGTCAAGGTGAACATTACCAACTCCAGCAGAGCATATGTCCATGAGACGATTGCAGTGTCTCCTTCTGAATTCTTGCAGGTTTGCTTGGTAAACACTGGGTCAGGAACTCCTTTCATCTCAGGGCTTGACCTAAGGTCACTCCCTGCAAATTTTTATCCAGAGGCCAATGTGGCACAATCTCTAGTTTTGCTCAGCTTTTTCCGTGAAACGGTCAGTTTTGGCTTCAATCGCTTCCATTTTGGAACTGATGAGCACCACATTAGGTACCCAGTTGATCGCTACGACCGCTTCTGGCAGAGGTATGAAGACATTCCTGGCTGGGAAGATGTTCCTGACAAAATCAATGGGACAGTCAAGAGCCCCCAAAACGACACCTATGGTGCACCTTCTGATCTTATGCGTAGTGCATCTACTGCGGTGAATGCCTCAAGGATGGACCTGCCATGGAGTTCTGATGCATCCATGGATGTTGGCATCGGCCCCGAGTACATTGTTGTGCTATACTTTGCCGAGGTGCAGGCTATCTCAGATAACTTGTTACGGCAGTTCCTTGTTTCTGTGGATAACACCCCGCTGGCTGCTGCATTCAGCCCACGGCACATGTTGGCTGATGTTTTCTCGGGAACTGTGCTAGGCTCAGACCAGCATAGCATCTCCCTCATTACAACAATAATCTCTGACCTTCCACCTTTGATTAGTGCCATGGAGATATTCTTAGGGCGGACACTGAATGAGTCTTCCACTGGCTCCTCTGATGGTATGTAGCATGAATTATAACTTTTACAACATTTTTTCCCTTCCCAATCAATCGACATGCTTGTTCATCTGTCTGTTTGTCTGTGTATTGCTACCGCCATATTTTAATATATGATGTTCAAGACAAGCTAATTAAGCCTTTTTTGCCTAATTAGCTTGTTCTAAACATGATATATTAAAATAAGGAGGTAATATGTCATTAAATCATGATAAAAAGTAGTTCACTCTTTACCTGTATTTTCCTCCGCTTTATACTTGCTTGCTATATATCTACAGCCATTGCCATGATGACTATACAGACAAGTATTCTGTGAAGAGGAACTGGGAGGGTGATCCTTGTGCTCCCGAAGCTTTTGTATGGGATGGATTGAGCTGCATTCATACTTCCATCGGAGACATCCAATATAATCCTAGGGGTTTGCACAGAATAACAGCTTTGTGAGTTAATTCTGCATGCACGATCAATATCAGAACATGCACGATCAATATCACAGCATGCATATATATGCTGCCAGAAGTTTTATTGACTTGCACAATTTCATTCAACAGAAAGCTAAGAGAAAGAAAAAATGAAAATCACACAGTGTACATTTTTCTTTTGACTTTAATACTTTGATCTTAACTGCAGGAACTTGTCATTCAGCGAATTGATTGGTGATATTGATGCTTCCTTTGGTCAGCTTTTGTTGCTCCGACACTTGTACGTAATGCATACTACTATATATCATTTCAGGCATACATTTTCCAACACTTTTAGTGTGATCATTAGTAGAAGTTGCAGACATGTATGTCAACTTGTAACGTTGAGTTGAGTCATCATGCCACCGAGACTAGTCATTTTGTATATATTATGGTATAGTTGCTTCTTCTACATGGTTCTGCTTGGTGTGGATCCAGAGAGGAAAATATAGTAGAAAAGCAGATAAAAGGAGTAGCGAAAACAGATTGGGCAAGAGATAAGGAGAAATGGGAAGAAAATGGAAGAGGGCAGAGCTATCGTGTGAGCAGACAGCATGATTGCAGAGTATTAGAGCATAGAACAGAATTGAGAATAGAGGGATAATATAGCATGTCCTGTCCAGGTCCAACCGCTACTATGTATTGTGCTGTAGCCAGACGTGGAGACGCTTAGTCCAAGCTTAGCTAAAGACATGGCATTATGCCTGCATATTAGTACAATTCAAGCAATTTATTCTCTTCATTGTGTTTCAAATAATAACATAACACTACAGCGTTTTTATTTTTTGGCAACTCAACCCATCATGCTGCTATGTTTGCAGGGATCTATCTTACAATAACCTGTCAGGATCAATACCTGACTTTCTGGGTCAAATGCCATTGCTTACCTTTCTGTACGTTCTACGCTTCCATTTAATCTATCCTTTTCAAAATTAGTGTAAGCTCTCTAGCAAATAATACTGTATATTTGGATACTGTAACGCACAAAACTATAGTATTTTGATATATAGTTCTCTTCTGTCATAGGGATTTGTCAAGCAATAACCTCAGTGGAACAGTTCCAACTAGTCTGCAAGAAAAATCTGACAGTGGGCAGATGATACTAAAGTTTGTACTTGTTTCTCATATCTTTTTGATGGAGGAAACTCATTATATTTCATACTATTTATAATTTTATTGCATTGAATTGCTGTTATCTTTTATGTGTCAAACAAGATTGCAGGCAGTCTTTTGCAAATTACCCTTTGCAATTTGGCGCCCTGTAATTAGAGGCTATAGTTGGATTCTTGATTGAAATTTAATCACCTAAAATCTCGCCAATTTACCTGGAATTATATTAATTGTGATCTCTTACATGTATGCCAATCGCCGTTCATTCTGTTTGCTAGGACTGGAAATAACCCCAACCTGTGTGGAAATCATACATGCGACCCCATTTCTAACAAAAACAAGAGGAACAAATTTATAGGTTTTGTAATAGCTGCTGCCATAGTAGCTACGGTGTTCGCGCTGTCCCTATCTGCACTTTTCATTTGGTACAGGAGAAGGAAGACAAACCCAGGTAACTGTAGCTAAATTACCAGTATATTGATAACATCGTAGGGATTCATTTGGCTAAAGATGCAGCAGCATTTATTCTGCACACTAAGTGCTATTTAAAATGGATGAGTGACTATGAATGCGTGAATGTCTCTCAAATCCAGATGTGCTTCCTGAAGCTGATCCATACAAGAGTCGGAGGTTCAAGTACAAGGAACTCCAAGTCATCACGAATGACTGGAGAAATGTAATTGGGGAGGGTGGATTTGGTCATGTCTATGCTGGTCAATTGGAGGATGTAACTGACGTTGCTGTCAAGGTTGAATCACAAACATCTTTGCGAGGGAATCATAAGCAGTTTCTGGCAGAGGTATGTACGAAGACACCAATTGTAGTACAGTTTGATGCATGCATGGCCTAATCTATATTATGTATCATTGGATCATTAGAAATAGTGTAAATGTAACCATGTGTATCTTGCAGGTTCAACACCTGACCAGGGTTCATCATAAGAACTTGGTGTCCTTAATTGGCTACTGTAACGACAAGAAACATCGATGCCTTGTCTATGAATACATGGATGGGGGAACCCTGGAGGGCCGGCTCAGAGGTCGGTAGCTAGTCACATTAAATTTTTACCCCCACAATACTCTAGGCAGCATTTCATAAACCACAGTACTAGGCTTGTTTGACACTGCTGCAATATTCATATGTGGCCTCTTCTCAACCATTGATCAAACAAAACATACTCTAATTACGCACAGTAGGAATTCACACATTAGTCAAAACAAGATAGAAAGCATTGTATGATTAGTTAATGGTTTACTTTTTTAATTAAAAATGAGTCCTTATGTACGTGTCATGAAGCATCACAGGAAAAATAAATTTGGAACTAAAAACAGTTTCTATTCAAGTTAAAAAAATATATAAAAGAAGGAAGAAAACAATATAAAATATAGTTTCAGAATTTTCAAAAGGCCCATCTGTTCTTGTTCACAGGTCGTGAAGATCCACCTGAACCACCCCTTACCTGGCTGCAACGCGTTAACATTGCACTAGGATCTGCCAACGGTACTGCGCATACCCAGAAATTTTAGTTAATTTGCATATCAGTTTTAAATAGTGCAAATTTTAGTTTACTGTGCCTAGTATCCCATGTTTGAAATAATTATACAAACACATGCGTGCAGGATTAAATTACCTGCACACGATGTGCAGTCCACGGTTGATTCACAGGGATGTCAAGGCGGGAAACATCCTTCTGACAGCAAACCTTGAAGCAAAGATATCTGACTTTGGGTTGACAAGGCCTTCCATCCATGGGACAGTGGAAACACGCACCATCACCCAACTGGCTGGCACTCCAGGATACATGGACCCAGAGTATATAACTATCTACTTGTTAATTCCTGACTACCTGTGTTAGTTTAGTACCATTCATAATATTTTGTTCAGGTCATTGTCAGCAGTAACCATGAGCGTGCATTGCATATATGCTTTTTAGATCCCTTCAAGCTAGTCATCCAAGTGAGAGCAACGACGTGTACAGCTTCGGAGTTGTTCTTATGGTGGTCATCACAGGGAGAACAGCGATCGTCACCATCAATGGCACAGAGAAGAACCTTGCACAGTGTGTGCGTGACTGGCTTTCAAGCGGAAGAGGAATCGAGGCTATCGCTGATCCGATGATACGAGATGATTGCAATCTCAGCTCTGTAGAGATGGTGGCACAATTGGCACTGGATTGCACGGAGCCCGCTGGGCAGGACCGGCCAACTATGGCGGATGTTGTGACCACACTGACGGAGAGCTTGCAACTGGAGATGTCGTGGTCGTCGCCGCACTCCATGAGATCCAGCACCACCATCTCATCATCAGCTGGGTTCACCGGTTCAGGGCGTGCTGATCATGACGCCGCTGCTGACTCCATTGCCGTGCTTCAAGTAGAACAGGCCGTCGTGGAAACATCAACAAGGTACGTAACATGCGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019475