BGIOSGA019511

From RiceWiki
Revision as of 02:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019511| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019511, complete gene.| tag = OsI_192...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019511

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019511, complete gene.

LocusTag

OsI_19226

Ensembl Transcript ID

BGIOSGA019511-TA

Ensembl Protein ID

BGIOSGA019511-PA

Length

2596

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11903026..11905621

Sequence Coding Region

11903026..11903608,11905176..11905378,11905505..11905621

Genome Context

<gbrowseImage1> name=IndicaChromosome05:11903026..11905621 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:11903026..11905621 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCACGCCGGCGCCGCCTACTGGATGGGATTTCTCCACGGGGGATTCCATCCGTGATGAAGTTTGGAGCCGTTTTGGTTCACCGGTTCACTTTTCCTCTCATTTTAGCCGTTCTACGTTTCGATTAGTGGTTGATGTTCCTCGTTCTTCGTTTCGATTGACCTCGTCCTCGGTGGCGCTTGCTCTTAGAGCGGCGATTGGTGGTTCTCCGTCTGATCTTCATGTTGATCCTTTGATTGATCGAAGTTTTACTTTTCTGGTGTGTTCTAAGAAAGTTGGACTCTGGATCTACTCTCTCAGATCCTTTTCTTGTAAGGATTTCTCGGTTCGGTATTTTCTCTGGAAGAATGGAGGTCCTGATTGGAGACGGGAATGGGATCTCTGGCAAGCTGAGCAATATAATGAATGGACCATTGTAAAGCGGCGATATTCTTCGGGTAATCGTTCTCAGCATTTGATAAAGGCTTCTTCTGTTTTTGATCGTCTTAAGTTTGATATTCCATCATCTCCGAAGAGGATTGCTCAGAAGTCTGATTCTATTGTCTCCAAGGAAATTTTTCTTGCTAATTCTGATCCGAAAGGCATGGAAATAGAGATTAGTCTTCCACCTTCCCCTAGGAAAAGAGGGAAGAAGAGAACACCTTTTGTTGACTCTCAAGTTAGAAGGAGTGGTAGACTTCTGGCTCTTAGGGATGGTTTCAAGAATATTCTGCAAGAGGATCCAAACATGGGTGTTGGAAAGCCAAGAGGGAAGGCAGTTAAAAAGCTGAAACAGTTGGCTGAGAAGATTGGATCTGAGATGTGTGGGACTTCCCTTGAGGAGGTTTCAAGCTTGGTGGACTTGGGAGAAGCTCAGGTCATCAAGCTGAAAACCATTGGACCATCCAATGATGAAGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MVTPAPPTGWDFSTGDSIRDEVWSRFGSPVHFSSHFSRSTFRLVVDVPRSSFRLTSSSVALALRAAIGGSPSDLHVDPLIDRSFTFLVCSKKVGLWIYSLRSFSCKDFSVRYFLWKNGGPDWRREWDLWQAEQYNEWTIVKRRYSSGNRSQHLIKASSVFDRLKFDIPSSPKRIAQKSDSIVSKEIFLANSDPKGMEIEISLPPSPRKRGKKRTPFVDSQVRRSGRLLALRDGFKNILQEDPNMGVGKPRGKAVKKLKQLAEKIGSEMCGTSLEEVSSLVDLGEAQVIKLKTIGPSNDEA</aaseq>

Gene Sequence

<dnaseqindica>1..583#2151..2353#2480..2596#ATGGTCACGCCGGCGCCGCCTACTGGATGGGATTTCTCCACGGGGGATTCCATCCGTGATGAAGTTTGGAGCCGTTTTGGTTCACCGGTTCACTTTTCCTCTCATTTTAGCCGTTCTACGTTTCGATTAGTGGTTGATGTTCCTCGTTCTTCGTTTCGATTGACCTCGTCCTCGGTGGCGCTTGCTCTTAGAGCGGCGATTGGTGGTTCTCCGTCTGATCTTCATGTTGATCCTTTGATTGATCGAAGTTTTACTTTTCTGGTGTGTTCTAAGAAAGTTGGACTCTGGATCTACTCTCTCAGATCCTTTTCTTGTAAGGATTTCTCGGTTCGGTATTTTCTCTGGAAGAATGGAGGTCCTGATTGGAGACGGGAATGGGATCTCTGGCAAGCTGAGCAATATAATGAATGGACCATTGTAAAGCGGCGATATTCTTCGGGTAATCGTTCTCAGCATTTGATAAAGGCTTCTTCTGTTTTTGATCGTCTTAAGTTTGATATTCCATCATCTCCGAAGAGGATTGCTCAGAAGTCTGATTCTATTGTCTCCAAGGAAATTTTTCTTGCTAATTCTGATCCGAAAGGTACGCATCTTAATCGTGATAAGCGCGGAATTCTTCCTTTTCAAATTAGAACCGATCTGGGCTGGTTTGTTTTCGGTGTTTGGGCTCTGATCACCTCATCCGGGATTGCTGCTCGGAGGTTAGATGTTTGCATTGTAAAAGTCTGGGCCATATTAAAAAGTTTTGCCCTTCTGTTGGGCTTGTTAAGTCTCCATGGCCCAATAAAGTGGTGTCTGCTAGGGGCTTGGGAAAAAAACTGTCTGTCCCAAAAAAGGAGCAACCTTTGCGCATTAAAACTCCACCTAATCAGGTCTGGGTTAAAAAAAATAAGAAACCCCCTTCGTCTTCTCCTTAAGTTGCTCGCTCTCTAGTAGTGGCGTCAGAATCGCAGCCTCAACCTAATCCTTTCCCTGCTCCAATGGCAAATACTAACCTTAATCCCCATCGCTTCCTGCGTGCGGGGCAAGTGGTACATCAAGGTGGTGATCGTGTGCCAAGAATCAACCTCTCTGCTGCTACCAAGCCGCCAAGGTCTCATGAAGAGTATGCCAGCTTTGGTTGAGCCCATCTTGCCGGAGGAACTTTGGGATGATCATCGGATTCTAATTTCTGAATACATTGAGCAGGTGCAGCACTTTACTGTTCGCCGTAGTTTTCCTCATGCTTCAGCTGTGGGTCTATTCAAGTTTGGTTCTGCCATGGTTAGGGACCTGCTAGTTTATGCTCCCCCTTTTATGTATGATGGTATACATCAGGTCAACTTTGTCAGACATGATCAGAGTCCTAACTGGCGTGCTGCTCCATTTACTAGAACTGTCTGGTTTTTATTGCTCGATTTCCCCCTAGATTACATCAACATGCAGTACATTTGTCTGGTTGTCTCTTCTTTCGGGCAGTTGGAGGAATGGTATCAAAATGACCCAATAGAGGGCAAAGTTTTGGTCAGAGCTATGTTCAAGGACTTTGATTCAGTCCCAAGGAAAATTGTTCTTCAAGATCCCACAAGTGGTGCTGGTGAATCCTGGACCATCTCTGTTTTTACCTTGGAGGGTGATTTTGCTGATATTTTTCCCCCTGATGAAGACCTTCCCCCTACTGGTCCAAATAATGATGAAAATCCTGATGGTAATGATGATGACGATGGTAATCAAGATAATATTTGGCAATTTGGCCCACATCCTGTGGTTCTTGCAGAAAGAAGACCAGGCTTGGAATCAGGCTGCTGTGGGCCATCAGGCCATGGACCTTGAACAAGCTGCTCCTGAGAACATGGGCCAGATTGATAACAACCATGGCTGGAATCTGGTTGCTAACAGAGGTTTAATTTTCACCCTTGCTGATGCTTTCAAAGATGCCTTCAATTCCTGGTATGCCAACTCTCTGGCAAATTCAGCCCTTCATCCTGCAAAGCTTAATTTTAATTTGGGAAATGAAATTGTGCCGTATGATTCTATTTCTTTTGAATCTTCTGCTATAATCCTGAGCCGAGAACCTCTAGCTGTCATCCCTCCGTAGTCTGTGATGCCTATTTTGCCTGAGGATCCTTTTGGCTCAATGGAGGAACATTCTTGTCCTTCTACTCCAACAGGCATGGAAATAGAGATTAGTCTTCCACCTTCCCCTAGGAAAAGAGGGAAGAAGAGAACACCTTTTGTTGACTCTCAAGTTAGAAGGAGTGGTAGACTTCTGGCTCTTAGGGATGGTTTCAAGAATATTCTGCAAGAGGATCCAAACATGGGTGTTGGAAAGCCAAGAGGGAAGGCAGTTAAAAAGCTGAAACAGTTGGCTGAGGTAAGTGGAATTATTTTCCCATCCGATTCATTATCTTCTATTGATTTAAATCCTGATATATCTTGTGAATCTGAAAGTGATCTTACATCTGTTATACCTGCTAATTGTGATATATCTTTTCTCCAGAAGATTGGATCTGAGATGTGTGGGACTTCCCTTGAGGAGGTTTCAAGCTTGGTGGACTTGGGAGAAGCTCAGGTCATCAAGCTGAAAACCATTGGACCATCCAATGATGAAGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019511