BGIOSGA019513

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Revision as of 02:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019513| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019513, complete gene.| tag = OsI_192...")
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Gene Name

BGIOSGA019513

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019513, complete gene.

LocusTag

OsI_19229

Ensembl Transcript ID

BGIOSGA019513-TA

Ensembl Protein ID

BGIOSGA019513-PA

Length

4562

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12155366..12159927

Sequence Coding Region

12155366..12155431,12156495..12156555,12156732..12156834,12156930..12157032,12157113..12157166
,12157286..12157348,12157439..12157488,12157577..12157652,12158046..12158267
,12158411..12158498,12158723..12158808,12159165..12159272,12159363..12159407
,12159673..12159763,12159824..12159927

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12155366..12159927 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12155366..12159927 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGTCTGCCGAGTTGCCGACGATGCTGCAACTCCTCTCGTCTCTTGGGCGTTTTTGCTTTCAGATCAGGGACATGAATATCGCAAAGCGGGAGGAAGACATCGGGTTCTATGCTGGATTTGTTGCGGCATCTTATTTCCTAGCTAGAACTTTCAGTTCTGTGCCATGGGGCATATTTGCTGACAAGTATGGAAGGAAGCCCTGCATCGTGATTAGCATCCTCTCAGTGATTTTTTTCAACACGTTATTTGGTCTTAGCACAAGATACTGGATGGCAATTGTAACTAGAGGAATGCTTGGGATGCTTTGTGGTATATTGGGACCAATCAAGGCATATGCTACAGAAATCTGCAGGAAAGAGCACCAAGCTCTAGGAATGTCTCTTGTTACATCATCACGAGCGGTAGCATTTGTTCTTGGACCAGCTATTGGAGGGTTTCTTGCACAGCCTGCAGAAAAGTACCCACATATTTTCTCCAAAGAATCCATATTTGGGAGGTTTCCATACTTCCTCCCATGCTTTACCATATCAATACTAGCAGCAGGATCATGCATCGCATGCATTTGGCTTCCCGAAACGCTACACTTACACAATGATGGAAAGGTAGGAGGTGCTGGTGAAGACGCACAAATTTCTGAGGAAGTGGAGGCACAAGCTGATCTCTCAAACATAGAATCTGGAAAAGCTAAAGTATCTAGTGACACATCTTTGAAGAACCTGTTAAAGAACTGGAAATTTGTGTCATCAGTAATCATCTACTGTACCTTTTCTCTCCATGATGTAGCTTACCTTGAGACATTTTCATTCTGGGCTGTGAGCAAAAGAAAATTTCGTGGTCTGAATTTGACATCCCAGGATTTGGCTACTGTATCAGCCATCTCAGGTATTGGTGTTCTGGTATATCAATTTACTGTTTATCCTTTCATTGCCAAATATTTTGGACCAATCAGACCATTACGTCCTACCGCGATCTTATCCGTGCTTCTCCTCACAGCGTATCCCTACATGCACAACTTACACGGGCTAGAGCTCAAAGTACTAATCAACATAGCTTCAATTTTGAAAAATGTATTCTCGGCTACAATTACTACTGCATGCAACATTCTACAAAATACAGCAGTGGTTTTCATGGTCTCAAAAGCACGTGACAGGGTTGTTCTTACCAGGTATACAAATAAACAACACATATGCAGCCTTATCAATATGGTGGCAGGTGGCCAGATCCTATTTCTAGTGATAAGCATGGTTGCAGTAATAGGGCTAATTCTGACATTCAAGCCATTTTTCTCCATGTCAGATGCGTTGAGCCGTTCATAA</cdnaseq>

Protein Sequence

<aaseq>MPSAELPTMLQLLSSLGRFCFQIRDMNIAKREEDIGFYAGFVAASYFLARTFSSVPWGIFADKYGRKPCIVISILSVIFFNTLFGLSTRYWMAIVTRGMLGMLCGILGPIKAYATEICRKEHQALGMSLVTSSRAVAFVLGPAIGGFLAQPAEKYPHIFSKESIFGRFPYFLPCFTISILAAGSCIACIWLPETLHLHNDGKVGGAGEDAQISEEVEAQADLSNIESGKAKVSSDTSLKNLLKNWKFVSSVIIYCTFSLHDVAYLETFSFWAVSKRKFRGLNLTSQDLATVSAISGIGVLVYQFTVYPFIAKYFGPIRPLRPTAILSVLLLTAYPYMHNLHGLELKVLINIASILKNVFSATITTACNILQNTAVVFMVSKARDRVVLTRYTNKQHICSLINMVAGGQILFLVISMVAVIGLILTFKPFFSMSDALSRS</aaseq>

Gene Sequence

<dnaseqindica>1..66#1130..1190#1367..1469#1565..1667#1748..1801#1921..1983#2074..2123#2212..2287#2681..2902#3046..3133#3358..3443#3800..3907#3998..4042#4308..4398#4459..4562#ATGCCGTCTGCCGAGTTGCCGACGATGCTGCAACTCCTCTCGTCTCTTGGGCGTTTTTGCTTTCAGGTAGGCCATAGGCAGGTACTCCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGCCCACATTCATATAAATGTTAATGAATCTAGATATGTATGATTCATTAACATCTATATGAATGTGGGCAATGCAAGAAAGTCTTATATTGCGAAATGGAGGAAGTACTATACTACTAGTATTAGGTGTTGCGCCCCCCTCCCCACACACACACCCCATCATGGGCCCCCGGTGATCGCCTTGGCTGCATAGCCCTAGGACCGGCCCTGAGCATGGTGGCAATGGAGATAGATGATTGCAGCATGCTACATCAAAGCTGCATAAGCGGTTCAGTGGCCTAAGACTCGAAAAATAGGCCTGCCATCTATTATGTTTGTTGCACCATAGTTGCGCTTAAATTGTTCGATCAAATGCTGATGGGTGGTTTTCAAGTCCATACCATTACTTGGTCTTGTCAACAATTCTTACAGATGTTGCAATAGAAAAGTTACAAGAGAAAAATATTTGCATTAGTGCAAGCAACTTGTACAAAGTAGTAGTACAAATTGGCATGCAGCCCTTACTTTTGAATGCTTGAGATCTCTATCAACACATGTTCCAGAATAAATTAGTCGCTTGGAGTACACCTATTTTTGTATGTCTCAATATCTGTGTCTTTTTTTCTTGGAAAATTTTACATCACAGTTTGCTATAGAAAAATAAATTGAATACTACAAAATTGATAGGGACTGGTTTTTTCACCTTGTTAAACATCTTTGAGATCACAACTATCTATAAAATGTAGAGGTTATATAGCACTATAGTTGTCCAAGACAGATTTACAATGATGTTATTTACTTTATTCTATCTTGCGTAAATGTGAATCATTTTTCTATTTCCAAATCAATCATATCATATTTGTTTTGTCTGTTGATGTATAACATCCCATTTTGGTCCATCCCAGCTCTACCGATCCAATCATTGTTCCCTTATCAATACTTCATGGTATGTATATGGTTCAGAGCAGGGACATGATTGCATTAAGAAATATATTGATTCATGACTCTATACTATTGTTGTAATGCAACAGATCAGGGACATGAATATCGCAAAGCGGGAGGAAGACATCGGGTTCTATGCTGGATTTGTTGGTGAGTAATGTCTCGAGGTTTCAGATCTTGCCTTGTATATGTTTATACTCTTAATCTCAATCTGATTGCATGTGCATTTTCCTTAAATAATGAGGCCATAGTTATTGACCTATTGTCACATTTCGATGATACTGTCATCACTAGCTACAGTCAAACTGACTATAATTCTCTTTCAGCGGCATCTTATTTCCTAGCTAGAACTTTCAGTTCTGTGCCATGGGGCATATTTGCTGACAAGTATGGAAGGAAGCCCTGCATCGTGATTAGCATCCTCTCAGTGTAGGAAATAATCAGCCACATTGTGGGGTCTTACTCTGTATTTAGCTAGTATGCCATGATCAAATGGGAGTAAACCATGTTTTGATTTTTCTCAGGATTTTTTTCAACACGTTATTTGGTCTTAGCACAAGATACTGGATGGCAATTGTAACTAGAGGAATGCTTGGGATGCTTTGTGGTATATTGGGACCAATCAAGGTTGCTTATTGTCTTTGCTTGCCCCAATTAGCAACTGAGAGTAGGCATTACATACTCATGGATACATATGTATTTTCCAGGCATATGCTACAGAAATCTGCAGGAAAGAGCACCAAGCTCTAGGAATGTCTCTTGTAAGAACAATGCTTAATTATATCTTTTGCCTTTCAAAACTTTAGCTTATTCAATAAATCTTTAGATTGTAATGTTCATATTTACCTGTATATAACTTAAGTCTAACATGACGTCCTAGGTTACATCATCACGAGCGGTAGCATTTGTTCTTGGACCAGCTATTGGAGGGTTTCTTGCACAGGTGAAAATAGTAGCTGCACTTTAATTGTATTATAAAATAATCAATGCAAAAGTATATGACTAACATTGTCTATCATGTATCATGTATTAGCCTGCAGAAAAGTACCCACATATTTTCTCCAAAGAATCCATATTTGGGAGGTGAGCTACTACTCATACTATTTTTGTTATATGATTTTTTATCGTTTTATGCATATGACAAAACTTTGAAATTTGCTTCTATCTTCAGGTTTCCATACTTCCTCCCATGCTTTACCATATCAATACTAGCAGCAGGATCATGCATCGCATGCATTTGGCTTCCCGTATGAAACATCTTGTCCTTTATGATTCTTTCCTTCAAAAATACAACTTATTAGGTCCCTTCAAAATACATTAAATGTATCAGGATTGTTACACTACCATACCATTTAGCACAAATTTCGACTACATATCCACACACATCTAAAAAAACCTTTCTTCTAAAAATATCATACTCCCTCCGTTTCACAATATAAGTCATTCTAGCATTTTTCACATTCATATTAATGTAAGTCATTCTAGCATTTTCCACATTCATATTGATGTCAATGAATCTAGACAATCTAGATTCATTGACATCAATATGAATATGGAAAATGCTAGAATAACTTACATTGTGAAACGGAGGAAGTAAGATTTATAGAAAGATGCATAGTATATTTATCCGATTTTCTCAGGAAACGCTACACTTACACAATGATGGAAAGGTAGGAGGTGCTGGTGAAGACGCACAAATTTCTGAGGAAGTGGAGGCACAAGCTGATCTCTCAAACATAGAATCTGGAAAAGCTAAAGTATCTAGTGACACATCTTTGAAGAACCTGTTAAAGAACTGGAAATTTGTGTCATCAGTAATCATCTACTGTACCTTTTCTCTCCATGATGTAGCTTACCTTGAGGTGATTTTTTCTTATATGATCATGAGAGTAACTTCTGTACAGTTCAATATGCGAGGATGCCAATAATATCATTGTGGACTTTGTGATTGATGCTAAGCTGTATGTGACCAATCTAATATGTTCTCTCTTGCTATTATCTTCAGACATTTTCATTCTGGGCTGTGAGCAAAAGAAAATTTCGTGGTCTGAATTTGACATCCCAGGATTTGGCTACTGTATCAGCCATCTCAGGTATATAGTATTTTTCCTTTAAAAAAAAAGGGTATATAGTATTTTTTTCCAAACTTTCATGCAAATAATTATTGCGTAACAAGAGAATTTCCTTGCAAAAAAAAGATAAATAATGACCTGCAAAATGAATTAAAGTAACATGCAAATAACATATGCCTTTAACACTTCCGGTAGAGTTGCCATCAAATTATTTACCTTACAACAACTTCATTTGATCCTTGTAGGTATTGGTGTTCTGGTATATCAATTTACTGTTTATCCTTTCATTGCCAAATATTTTGGACCAATCAGACCATTACGTCCTACCGCGGTACGTGGGAAATATAACTTTGTGAGATTCGCTTCAGTATTCTACTTGTAAAAAAAAAATCAAGGATCTAAAACAATGTAGTCTAATGCTAAGTGGGGAAACAAATATGCATCAATCTAGTAAAATAAATTAAAGTGAAGGTATAGATTTGAATATTAGATGGGGGAATAGTATTTGATTTCCTTCTATAAAAATAATGAGGTATGCATGACGATTTGTTCCTATAAAAACAATGAGGTGGCAATGACAATTTCTAAAAGCGGTGTATTGGTTCAAATCCTAATTTTTGTTTAAATGCTTGTTTAGTTTCTTTTATCTTTTCAAGTACCATGTTGAACCTATTGTTTGATTTGTAGATCTTATCCGTGCTTCTCCTCACAGCGTATCCCTACATGCACAACTTACACGGGCTAGAGCTCAAAGTACTAATCAACATAGCTTCAATTTTGAAAAATGTATTCTCGGTGGGTCAACTTCTTTTCTCATATTACCTCAAAAAAAAATTTAATTATTTCACATTTTTATTTAATTTTGATCTATATTTCAACAAACAGGCTACAATTACTACTGCATGCAACATTCTACAAAATACAGCAGTGGTAAGCAACGAGCTTGTCTGTTAAGCTCATTTTTCTAATACGTTCTATCGTTTTTTAGATTCTGACTTATCCTATATGGAAGAAGTGCAGACACAAAAACAAAGAGGTGCTGCAAATGGCATCTCCGTGACTCTATTGTCATTGTTCCAAGGATTAGCTCCAGCAGGAGCAGGAATTTTGTAAGTACTACGTTTTATTGTCCAGAAAAAAATTATTTATTTTTTGTTTTTCTGCTCGAAGAACTTCTTTTCTTGCTATTTTATAGGTTTTCATGGTCTCAAAAGCACGTGACAGGGTTGTTCTTACCAGGTATACAAATAAACAACACATATGCAGCCTTATCAATATGGTGGCAGGTAGCTAAAACACAACAAATTACTGAGTGCACATTGTTGTTTGACTTATCAAAAATGCAGGTGGCCAGATCCTATTTCTAGTGATAAGCATGGTTGCAGTAATAGGGCTAATTCTGACATTCAAGCCATTTTTCTCCATGTCAGATGCGTTGAGCCGTTCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019513