BGIOSGA019520

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Revision as of 02:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019520| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019520, complete gene.| tag = OsI_192...")
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Gene Name

BGIOSGA019520

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019520, complete gene.

LocusTag

OsI_19246

Ensembl Transcript ID

BGIOSGA019520-TA

Ensembl Protein ID

BGIOSGA019520-PA

Length

2361

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12367947..12370307

Sequence Coding Region

12367947..12368357,12369403..12369570,12369627..12369725,12369933..12370307

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12367947..12370307 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12367947..12370307 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACCGCCACCGGCGATGAAGCCTGCCTCCCGGAAGCGCGGGCCGCCGGCGCCGGACCCGGTGGAGCTTCCCCCGCCGGGCTTCGTGGCGGACCGCGCGGAGGCGGCGGCCCGCGTCGAGCGGCTGCTGCGCTACCAGTTCCGCGACGGGCGCCTGCTGGAGGAGGCGCTCACGCACCAGTCCTTCGCCGACGACGCCGTCTCCTACCAGCGGCTCGAGTTCGTCGGGGACTCGGCGCTCGGCCTCGCCTTCTCCAACTTCCTCTACCTCACCAACCCCACCCTCGGCCCCGGCCCGCTCTCCACGCTCCGCGCCGCCAACATCTCCACCGAGAAGCTCGCGCGCGTCGCCGTGCGCCACGACCTCTACCCGCTTCTCCGCCGCAACTGCCCCCGCCTCGATCTCCTCGTAGGTCAGTTTATTGAAACAGTGAAGCAAGAGCCAGAGGATGATCTTAGTACTGTACCTTATGGTGGTAGTGTTGTCAAGGCTCCCAAGGTGCTCGCTGATATTGTTGAGGCCATTGCTGCTGCTGTCTATGTTGATTGCAAATTTGATCTTGAGAAGCTCTGGAAGAGACTCACATGGTTACATGGCCTCCAAGAAATAAGGTGGACTGTTAATACAAATAACATAAAAGATTGGATAAACAATTTTATTTATGGGAAGCGTCTGGTCACAAGGTGGCTGTTTGAGCCAATTATTACAGCAGAAACAATAGACGAGCAACCTGTGACTATGTTGCATGAACTATGCCAGAAACACGGGAAGATGGCACAATTCAAGACATGGCAAAAAGGTGGGATGACAGTGGTCAATGTATTTGTTGCTGGGGAGCTAGTTGGTATTGGTTCCTCGGAGCAGAAGGTAATTGCTAAGCTTAATGCTGCACGGGATGCAACAAGGAAGCTTGCAGGTGCAAAGAAGCAAGTGTTAACAACTGGGGTTGGCAACGGATTGGGGGATGAGATTGGAGAGCTTAGGGAGTGCAAACAGAAGCTTAATGAGCAATGCAGCAGGCAGAATTGGCCAAAACCTATCTTTAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAPPPAMKPASRKRGPPAPDPVELPPPGFVADRAEAAARVERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYGGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKRLTWLHGLQEIRWTVNTNNIKDWINNFIYGKRLVTRWLFEPIITAETIDEQPVTMLHELCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAKKQVLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKPIFK</aaseq>

Gene Sequence

<dnaseqindica>1..411#1457..1624#1681..1779#1987..2361#ATGGCACCGCCACCGGCGATGAAGCCTGCCTCCCGGAAGCGCGGGCCGCCGGCGCCGGACCCGGTGGAGCTTCCCCCGCCGGGCTTCGTGGCGGACCGCGCGGAGGCGGCGGCCCGCGTCGAGCGGCTGCTGCGCTACCAGTTCCGCGACGGGCGCCTGCTGGAGGAGGCGCTCACGCACCAGTCCTTCGCCGACGACGCCGTCTCCTACCAGCGGCTCGAGTTCGTCGGGGACTCGGCGCTCGGCCTCGCCTTCTCCAACTTCCTCTACCTCACCAACCCCACCCTCGGCCCCGGCCCGCTCTCCACGCTCCGCGCCGCCAACATCTCCACCGAGAAGCTCGCGCGCGTCGCCGTGCGCCACGACCTCTACCCGCTTCTCCGCCGCAACTGCCCCCGCCTCGATCTCCTCGTACGTGCCGAGACAATCCATCTCTTCTCTTATTGGAGAATCATGCAATTTCGATTTTTGATTTGATGCTCGCTCAATCGGTTGGCCTTGGGATAGTAAAGTACTAGTTAAACTCTGTTGACATACTTTTGTAGATTCTATGTTTTCCAATCTGTATACTGCCATGGTAAGTAAGATTGTGGTCACACAAATGCTATGGTTGTGCCTTTCACTTTGCTTAGACCATTGCGTCATAAGTGAGTTCACGGTTTATATCAAGGAAGGGATAAACTGGTGTGCTCAATCGCCCATTGGAAAATTTTTAATTCCTGTCTCCCGGCTTGACACTCGGAATTGATTTTAAACGTCAAGACCAGTTTTCATGTACTATATGTTTCTCTTAAACTTTAGACCACATGGACGCCATTCTCTTTCTTATGGTTTTAGAAATTTCCTTCCTTTGTACTGTTTATATGCAATTTGGTGGTGTTTAGCATTTATAGAAAGAAAAAGAAGCAAGTAATGGCATTAATATATCTTTTGAATGTACTAAGTGCTATTCTTCCAAACCTGTGAAAACCATAGAAGATTTTTTGTGTCCATTCCAATGCTTAGTATACTGCTATAACTGGATGTTTTATCTCCTTGAGCAATAAAAAGAGAAGGGGACACCGTAGGTGTAGTGGTAGTTCAAAGTTCAACCTCTCAACTTTGAAATTAAGCCCATGTCTTTATTCTTGACTATGTAGTTAAAAGGAAGCAATGTTGATTCTGGACAACAGTTGGTTTCTACCTGAAATGAAAAAAAAATGCTGACTCAAATTCCATTGTCTTTGACCTCTTATTCATAACGGGAATTTGATATGCAAATTTTAATCTTTTCGAATGAATTGCATCATTTTGTATCAATTGTTTGTTGACACTATAGAAATGCTTTTGAATAGGTGCTCTGAACTGTTAGTGTTTTTCTGCTATTACATCTACATTATATTTTTATGAGGTAGATATTGGACTTAATGTTTTAATTATCATTCTTCTGTAATTGGCTATACTACTAATAATGCAGGTAGGTCAGTTTATTGAAACAGTGAAGCAAGAGCCAGAGGATGATCTTAGTACTGTACCTTATGGTGGTAGTGTTGTCAAGGCTCCCAAGGTGCTCGCTGATATTGTTGAGGCCATTGCTGCTGCTGTCTATGTTGATTGCAAATTTGATCTTGAGAAGCTCTGGAAGGTTCTTAGCTTTTACTTTATGGTGTACTACTGCTAACAATTCTTTACATTCTTCAGAGACTCACATGGTTACATGGCCTCCAAGAAATAAGGTGGACTGTTAATACAAATAACATAAAAGATTGGATAAACAATTTTATTTATGGGAAGCGTCTGGTATTTTTTTTATCATATGACTAATATCATATTGATGTACCTACAATTGTGCAGTTAGGAAATTTTGATGGTCCCTTGAGGAAAAGGAGAAATTTAACTGCATGATATCTAAGCCAACATTTATGATCACATACACATACACGGAGATAGATAGAGTAGATGGATTTACTGGTGGTGATAGTAATAGCTGTGTTGTATATGATTTAGGTCACAAGGTGGCTGTTTGAGCCAATTATTACAGCAGAAACAATAGACGAGCAACCTGTGACTATGTTGCATGAACTATGCCAGAAACACGGGAAGATGGCACAATTCAAGACATGGCAAAAAGGTGGGATGACAGTGGTCAATGTATTTGTTGCTGGGGAGCTAGTTGGTATTGGTTCCTCGGAGCAGAAGGTAATTGCTAAGCTTAATGCTGCACGGGATGCAACAAGGAAGCTTGCAGGTGCAAAGAAGCAAGTGTTAACAACTGGGGTTGGCAACGGATTGGGGGATGAGATTGGAGAGCTTAGGGAGTGCAAACAGAAGCTTAATGAGCAATGCAGCAGGCAGAATTGGCCAAAACCTATCTTTAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019520