BGIOSGA019532

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Revision as of 02:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019532| Description = 60S ribosomal protein l15| Definition = Oryza sativa Indica Group BGIOSGA019532, complete gene.| tag = OSJNBA0018H09....")
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Gene Name

BGIOSGA019532

Description

60S ribosomal protein l15

Definition

Oryza sativa Indica Group BGIOSGA019532, complete gene.

LocusTag

OSJNBA0018H09.6

Ensembl Transcript ID

BGIOSGA019532-TA

Ensembl Protein ID

BGIOSGA019532-PA

Length

4095

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12609139..12613233

Sequence Coding Region

12609139..12609661,12611764..12611930,12612697..12612894,12612988..12613233

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12609139..12613233 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12609139..12613233 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCGCCTGTCGCCTAGCTCCTTCCCGCGGGTCATCGCCCTTCTCCCCGATGGCCGCCGCCCCTCTCCCTGTCGGTCGTCGTCATCGTCGTTGTCCACGGCATGTGATCGTGGCGCGGTGGAGGAGGAGGAGGGAAGCGGGGTGAGAGGGGAGGCAACCAGGTCGTCGTTGTCCGCGGCATGTGATCGTGGCGTGGTGGAAGAGGAGGAGGGGAGCGGGGTGAGAGGGGAGGCAACTGGATCGTCGTCGTCTGTGACATGTGCTCATGGCGCGGTTGAAGCTAAGCCGCATTTCCCGCGTGGCAAGGATGGAGGCGGTAGGAGACGGGGCAGGAGCGGAGGACGGCGGGGCCGGTCAGTCCTCCTCAGCACAGAAACGTGGGTGGTGTGGAGGCGGCGGAGCCATAGCCGAAGGACCACGTTTGCTCCTATCCCGCCACCCACCGTGCTCGCAGTCCTCACTGCGCTCCTCTCCCTCTTTCTCTTGTCATCACCGGCGTTCTTGGAGCCACAAGTCACAGGGGCGTACAAGTACGTGTCGGAGCTATGGAGGAGGAAGCAGTCGGACGTGATGAGGTTCGTGCAGCGCGTGCGCTGCTGGGAGTACCGCCAGCAGCCGGCCATCGTCCGCCTCACCCGCCCCACCCGCCCCGACAAGGCCCGCCGCCTCGGCTACAAGGCCAAGCAGGGCTATGTGGTTTACCGTGTTCGCGTCAGGCGTGGTGGCAGGAAGAGGCCAGTGCCCAAGGGTATTGTCTATGGCAAGCCCAAGCACCAGGGTATTACCCAGCTCAAGTTCCAGAGGAACAAGAGGTCAGTTGCTGAGGAGAGAGCTGGACGCAAGCTGGGTGGACTCAGGGTGCTCAACTCCTACTGGGTGAATGAGGACTCCACCTACAAGTACTTTGAGATCATCCTTGTGGATGTTGCTCACAGCGCTATCCGCAATGACCCAAGGATCAACTGGCTCTGCAAGCCTGTGCACAAGCACCGTGAGCTCCGTGGCCTCACCTCTGCTGGCAAGAAGTACCGTGGCCTGCGCGGCAAAGGCCACACTCACCACAAGGCCAGACCTTCCCGCAGGGCCACCTGGAAGCGCAACCAGACCGTCTCTCTTCGTCGCTACCGTTAA</cdnaseq>

Protein Sequence

<aaseq>MSRLSPSSFPRVIALLPDGRRPSPCRSSSSSLSTACDRGAVEEEEGSGVRGEATRSSLSAACDRGVVEEEEGSGVRGEATGSSSSVTCAHGAVEAKPHFPRGKDGGGRRRGRSGGRRGRSVLLSTETWVVWRRRSHSRRTTFAPIPPPTVLAVLTALLSLFLLSSPAFLEPQVTGAYKYVSELWRRKQSDVMRFVQRVRCWEYRQQPAIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPKHQGITQLKFQRNKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHSAIRNDPRINWLCKPVHKHRELRGLTSAGKKYRGLRGKGHTHHKARPSRRATWKRNQTVSLRRYR</aaseq>

Gene Sequence

<dnaseqindica>1..523#2626..2792#3559..3756#3850..4095#ATGTCGCGCCTGTCGCCTAGCTCCTTCCCGCGGGTCATCGCCCTTCTCCCCGATGGCCGCCGCCCCTCTCCCTGTCGGTCGTCGTCATCGTCGTTGTCCACGGCATGTGATCGTGGCGCGGTGGAGGAGGAGGAGGGAAGCGGGGTGAGAGGGGAGGCAACCAGGTCGTCGTTGTCCGCGGCATGTGATCGTGGCGTGGTGGAAGAGGAGGAGGGGAGCGGGGTGAGAGGGGAGGCAACTGGATCGTCGTCGTCTGTGACATGTGCTCATGGCGCGGTTGAAGCTAAGCCGCATTTCCCGCGTGGCAAGGATGGAGGCGGTAGGAGACGGGGCAGGAGCGGAGGACGGCGGGGCCGGTCAGTCCTCCTCAGCACAGAAACGTGGGTGGTGTGGAGGCGGCGGAGCCATAGCCGAAGGACCACGTTTGCTCCTATCCCGCCACCCACCGTGCTCGCAGTCCTCACTGCGCTCCTCTCCCTCTTTCTCTTGTCATCACCGGCGTTCTTGGAGCCACAAGTCACAGGTGGCCGGCGGGCACCCGCTTCAACACCGCAGCCATGGGCAGCCGCCGTTGTGGGAGCGGGATAGGATGGAAGGGAGGGGAAGAGGGTGAGGGGGAGGAAGTAGGACCCACTGACATGTGGGTCCCTCTATTTGTTGTTTGGCTAACGTATGGGTCTCGCGTATTTTGTTTTATTTTTCCAGTTTTTAATTTTGTTCCTTTTATTTTTTTCGGATCAAACAACCACGTAAGCGCCACGTCAATTCCACGTGGTACAAAGGTACCGCGTTAGCCAAAACCGAACACAATACTGCCGAGAGACCTTAGTTTTGTAAGTTAAGGGATGGGTTGTATCTTTTTTTTTTTTGAATCAGGGATGAAAATCAGAGGATGATAAATTGAGGGACCTCAAGTGAACTTATTCATAAGTAATTTGTGTTCAAAATATGTAACGGCGGGGAATAAGTTCATCTGAGGTCCCTTAACTTATCAACGAATCCGATTTTCGTCCTTCAATTAGAAAACCAGATACAACGGGTCCCTCATCTGTTAAAACCGGTGTAATATAGGTCTCATAACGGGTCCCTCATCTACAATTTTTCCTTATGTGGCACCTACCTGGCTTAATTGACTTGGTCTTCATCTGACGTGGCATTGATGTAGCATTGACGTGGCAATTTATTTAAAAATTAATAAAAAAGAGTGACCCTACATGTCAGTTACACAAAAAATAATTAAAAAAGTTGGTCATTCTCACCCTACCCTTCTTCCTCATCTCTCCCCATCCCCCTCTCTTCAACTCTCTCCCCTCTTCTCTCTCTAGGCGCCACGGAGTGTTCGGCAGTTGGCGGCGACGCAAGAGAAGGGGAGGGCATCGGTGGCGGGAGCGCTAGGCGTGGTGGGGGGGGGGGGGGGGCGGAGCATCGGCAGGCCGCGGGCTGAGCGGCGGCAGCAAAGGTGGCCGGAGGAGGAGGTCGCCGACGAGTGCGACGAGCGAGGCTTTGGAGGTGGCCAATCGAGACGAGGAGCTCATGGCCGACACCTGTGCCGGCAAGTGTGGTGGCGGCGGAGTCTAAGACGGAGGGTGAGGTCGTCGGTCTCATCTTCGTGGCCTGGCCGTGTTGAGGCGGCGGCTGCCGGTCTGATCCATCCGCGAGAGGCCCGACACCATCGATGAGCTGCTTGACCGCCACCTCGCCAAGAAGTCCCACTCCTCCTCCTCTGGGCTGCTCGACGGAGATGCAGCAGAGGCCGAAGTGCGCTTCCAGCTGACGAGCTCGTGGCAGGAGGCGCTTGGGCTCCGGAGGCGATGAGACGGCCGCATACTCCCTACTCCTGCTGCTACCGCGCTCGCCGGCGACCTCCTCCGACCACCTCGGCCACCACTCTGCCCGCGGCCCTCACCCAGCTCTCCCGTCGCCGACGCCCTCCCCTTCCCTTGCGTCGCCGCCGCCGCCGAATCTCCCGTGGCGCCTGGAGAGAGGAGAGGAGAGATGGGGAGAGATGAGGAAGAAGGGTAGGGTGGAGAATGACATGTGGGGCCCACGTGGGCCCCACCATTTTAAAATTATCTTTTTTATGTAACTGACATGTGGGGTCACTCTTTTTTATTAATTTCCAAATAAATTGCTATGTCAATGCCACGTCAACGCCACGTCAGATGAAGACCGGGTCAAATAAGCCACGTAAGAAAAAAAAAAAAAGCCATCCAAACCATTATGAGACCTGTATTGCACCGGTTTCTGGATTCTGGTTGAACGACGAAAATCGTATTCGTTGAGGGGCCTCATATGAACTTATTCCTAACGGCGGGGCAGGCTGAAAAGGAGCAGCAGGCTGCTGGGCTCATTCTGGTAGGGCTCACTGCACCTATGGCCCAAATATGGCCCATCAGCGACCCATTCCCCAGGCCTACAACCGTAAACCTCCTCTATCTAACCTCCTCCACCACGCGCATCCACGCAAACCCTACCAGCCTCTCTCTCCCGCTCCACCTCCGCCGCCGCCGCCGCCGCAGCAAGAGACATGGGTGAGCTCCTCCTCCTCCTCCGCCTGTTCCTCGTCGACCTCCCCCTACATCTCTCCTCTCTTCTGATGCGCCCGGTTTTTGCTGCGAGGTGCAGGGGCGTACAAGTACGTGTCGGAGCTATGGAGGAGGAAGCAGTCGGACGTGATGAGGTTCGTGCAGCGCGTGCGCTGCTGGGAGTACCGCCAGCAGCCGGCCATCGTCCGCCTCACCCGCCCCACCCGCCCCGACAAGGCCCGCCGCCTCGGCTACAAGGCCAAGCAGGTCGCTTCCCTTCTTCTTACTAGACTGTCCCCCTCTCTCGCTCTTACTACTGTGCCCGCGGATCTGTATCAATCGACGATGGATTTCGCCTTGGTTGCTGCTGGTAGCCGTCTAATTTGTAGAGATTTTTAGATAGATTTGCAGGTCCAGCCGATCATCGTGAATGCGGAAAATGTGTAGAGCCATTTATTTTATTAATTCTGCTTGTATGCCTTCAATGCAAGTTGAAGGACTGGTCTGGTTTCTGGAAATGGAAGTTTAGTTTTGTCGTGCTGTTTTTTATCTACTTAACCTAGATCCGCCATATGTTAGCAGGCAGAGCATCAGTTAACCACCGGTTTAGTTTTTTATAGTGGCGCTTAATGCGCCATTTTCATTTGATTGTATCACTGCAGTAGCTTAGGTTCTCTACTACATTTTAAAGGGATGCCTTTGTCAATGTATTAACATTCCTTGTGATTGTATTTGTCTTACAAAAGACATGTTTTGATGTGTTATTTTACTTGGAATTGACATGGTACATTGGTTGTCTGTGTTTATACTGCATTGATTATGTAGCATTTAGCAATTTAATGCTCAAGGTTGATAAAACTGTATTGTGTTGTTTGTACTATTAGTTTGCTAATGATACTCTAGCACAATTTTGTATGGTTGCTCCAATTGTTTAGCCAAAATGTATTCACATGCTGCTGTCTGATTCACTTTTGAATGTTTTGGCCCTATAATCCAAATATTGTGCATAACTATTTTTTGACCTTGCTTTCAGGGCTATGTGGTTTACCGTGTTCGCGTCAGGCGTGGTGGCAGGAAGAGGCCAGTGCCCAAGGGTATTGTCTATGGCAAGCCCAAGCACCAGGGTATTACCCAGCTCAAGTTCCAGAGGAACAAGAGGTCAGTTGCTGAGGAGAGAGCTGGACGCAAGCTGGGTGGACTCAGGGTGCTCAACTCCTACTGGGTGAATGAGGTATATTTGATTTCACTGGGATCTTGCGGAAGATGGCAAAAAAAATTTCAGCTGCTTTTCATTAATTCCTTTGTTTTCATTGGCTTAATGTAGGACTCCACCTACAAGTACTTTGAGATCATCCTTGTGGATGTTGCTCACAGCGCTATCCGCAATGACCCAAGGATCAACTGGCTCTGCAAGCCTGTGCACAAGCACCGTGAGCTCCGTGGCCTCACCTCTGCTGGCAAGAAGTACCGTGGCCTGCGCGGCAAAGGCCACACTCACCACAAGGCCAGACCTTCCCGCAGGGCCACCTGGAAGCGCAACCAGACCGTCTCTCTTCGTCGCTACCGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019532