Os11g0701800

From RiceWiki
Revision as of 09:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0701800| Description = Chitinase (EC 3.2.1.14) III C10701-rice (EC 3.2.1.14) (Class III chitinase homologue (OsChib3H-a)H-)| Version = NM_00...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0701800

Description

Chitinase (EC 3.2.1.14) III C10701-rice (EC 3.2.1.14) (Class III chitinase homologue (OsChib3H-a)H-)

Version

NM_001075059.1 GI:115486766 GeneID:4351194

Length

1229 bp

Definition

Oryza sativa Japonica Group Os11g0701800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:30562436..30563664

Sequence Coding Region

30562526..30563440

Expression

GEO Profiles:Os11g0701800

Genome Context

<gbrowseImage1> name=NC_008404:30562436..30563664 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:30562436..30563664 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcgctcggacgccgttcatggctggtcccgctggccatggtgctcgccgtctccagctgcctcgccggcccggcgatggccgccggaaagaccgggcagatgaccgtgttctggggccgtaacaagaacgagggaaccctcaaggagacctgcgacaccggcctctacaccaccgtcgtcatctccttctacagcgtgttcggccacggccgctactggggcgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggcggcgccggcaaggactactccctcccgacctccaagtccgccgccgacgtcgccgacaacatctggaacgcccacatggacggccgccgccccggcgtgttccgccccttcggcgacgccgccgtcgacggcatcgacttcttcatcgaccagggcgcgcccgaccactacgacgacctcgcccgcaacctctacgcctacaacaagatgtaccgcgcccggacgccggtgaggttgacggcgacggtgcgctgcgcgttcccggacccgaggatgaagaaggcgctggacaccaagctgttcgagcgcatccacgtccgcttctacgacgacgccacctgctcctacaaccacgcggggctcgccggcgtcatggcgcagtggaacaagtggacggcgaggtaccccggcagccacgtctacctgggcctcgcggcggcgaacgtgccggggaagaacgacaacgtgttcatcaagcagctctactacgatctgcttcccaatgtgcagaaggcgaagaactatggcggaatcatgctctgggacaggttctacgacaagcagaccggttacggcaaaaccgtcaagtactgggcttaa</cdnaseq>

Protein Sequence

<aaseq>MVALGRRSWLVPLAMVLAVSSCLAGPAMAAGKTGQMTVFWGRNK NEGTLKETCDTGLYTTVVISFYSVFGHGRYWGDLSGHDLRVIGADIKHCQSKNIFVFL SIGGAGKDYSLPTSKSAADVADNIWNAHMDGRRPGVFRPFGDAAVDGIDFFIDQGAPD HYDDLARNLYAYNKMYRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDDAT CSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQK AKNYGGIMLWDRFYDKQTGYGKTVKYWA</aaseq>

Gene Sequence

<dnaseqindica>91..1005#caatcttacatcaactacctacttcctacgtagcccagtaactatacattattaaggctaaccagtaactaactaaggcacacgtacgcaatggtggcgctcggacgccgttcatggctggtcccgctggccatggtgctcgccgtctccagctgcctcgccggcccggcgatggccgccggaaagaccgggcagatgaccgtgttctggggccgtaacaagaacgagggaaccctcaaggagacctgcgacaccggcctctacaccaccgtcgtcatctccttctacagcgtgttcggccacggccgctactggggcgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggcggcgccggcaaggactactccctcccgacctccaagtccgccgccgacgtcgccgacaacatctggaacgcccacatggacggccgccgccccggcgtgttccgccccttcggcgacgccgccgtcgacggcatcgacttcttcatcgaccagggcgcgcccgaccactacgacgacctcgcccgcaacctctacgcctacaacaagatgtaccgcgcccggacgccggtgaggttgacggcgacggtgcgctgcgcgttcccggacccgaggatgaagaaggcgctggacaccaagctgttcgagcgcatccacgtccgcttctacgacgacgccacctgctcctacaaccacgcggggctcgccggcgtcatggcgcagtggaacaagtggacggcgaggtaccccggcagccacgtctacctgggcctcgcggcggcgaacgtgccggggaagaacgacaacgtgttcatcaagcagctctactacgatctgcttcccaatgtgcagaaggcgaagaactatggcggaatcatgctctgggacaggttctacgacaagcagaccggttacggcaaaaccgtcaagtactgggcttaattaattaacctactactactatttactgctactatgcgttaatttgtgcgtgtgtgtttgagaataaaatatgttggtgtgtgttggtttttttatgtaggtatatgaataaaacgagatccatatgtaacgatggagatctcgagttgtttgtttgttggtcatcaatcgaataaagtgtatgaacaatatatcagaaatggttattatgtaattttgtctct</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0701800, RefSeq:Os11g0701800