BGIOSGA019549

From RiceWiki
Revision as of 02:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019549| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019549, complete gene.| tag = P0628H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019549

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019549, complete gene.

LocusTag

P0628H02.3

Ensembl Transcript ID

BGIOSGA019549-TA

Ensembl Protein ID

BGIOSGA019549-PA

Length

1501

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:13659918..13661418

Sequence Coding Region

13659918..13660367,13660474..13661418

Genome Context

<gbrowseImage1> name=IndicaChromosome05:13659918..13661418 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:13659918..13661418 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGAGCACCGACCTTAGCCTTCTCCGTCAGGCGGCGCGAGCGCGAGCTGGTGGCGCCGGCGAAACCGACGCCGTACGAGTTCAAGATGCTGTCGGACATCGACGACCAGGACATCCTTCGCTTCAACCGCTCCGGCATCCTCTTCTACCGCCACAGCCCCTCCAAGGACGGCCTCGACCCTGTCAAGGTGATCAAGGCGGCGATCTCGGAGACGCTCGTGCACTTCTACCCCGTCGCCGGTCGGTTCCGTGAGCTGCGGCCAACTAGGAAGCTTGTGGTGGAGTGCACCGGCGAAGGCGTCGTGTTCGTCGAGGCCGACGCCAACTTCCGGATGGATGAGCTCGGGACGTCGCTGGCGCCGCCGGTGCCGTGCTATGACATGTTGCTGTGCGAGCCGGAGAGCCCGACGGCAGATGTAGTTGACCGTCCTTTGCTGTTTATTCAGGTGACGCGGCTGGCGTGCGGCGGCTTCGTGTTCGGGATGCACATATGCCATTGCATGGCGGACGGCTCTGGGATAGTGCAGTTTCTGACTGCACTGACCGAGTTCGCCCGTGGCGTGCACGGAGCCCCGACGGTGCGCCCGGTGTGGGAGCGCGAGGTGCTCACCGCCCGATGGCCGCCGACCGTCACGCGCGACCACGTGGAGTACACACCCCTGCCCAACCCCGGCAAGGACGTGCTCTCCCCCACTGACGCGTACGCACACCACGTCTTCTTCTTTGGGGCGAGTGAGATCGCGGCGCTCAGGTCGCAGGCGCCGCCCGACCTGCGCGCCGTCAGCTCCCGGTTCGACCTGGTGGGAGCGTTCATGTGGCGCTGCCGCACCGCCGCGCTGCGGTACGACCCGGGAGACGTCGTCCGCCTGCACATGTTCGTGAACGCCCGCGTCAGGAACCGGAGCAAGCGGCCCGTGCCGAGGGGCTACTACGGCAACGCGATTGTGTTCGCTGCCGCGTCCGTGCCGGCGGGGGAGCTTTGGCGGAGGCCCTTCGGCTACGCGCTGCGGCTGCTCATGCAGGCCAAGGCGCGTGCGTCGGAGGAGGGGTATGTGCAGTCGGTGGCCAACTTCAACGCGGCTCACCGGAGGCCGCCGTTCCCTAAGGCCAGGACGTACCTCATCTCGGACATGACACAGGCCGGGCTGATGGCCATCGACTTCGGCTGGGGAAAGCCGGTGTATGGAGGGCCGGCGACGACAATGCTGGCCACGTTTCACCTTGAGGGGAGGAATGAGGTTGGTGAGGCAGGCGTCATTGTGCCCATAAGGTTGCCGAATCCAGTGATAGAGAGGCTAATACAGGAGGTGAACAAGGGGCTCACTGCCGGAGCTGTTGCCGACGCAAAAGCAAACGTGGTACCTGATGATTGCGTTCTAGCAAAACTGTAG</cdnaseq>

Protein Sequence

<aaseq>MAGAPTLAFSVRRRERELVAPAKPTPYEFKMLSDIDDQDILRFNRSGILFYRHSPSKDGLDPVKVIKAAISETLVHFYPVAGRFRELRPTRKLVVECTGEGVVFVEADANFRMDELGTSLAPPVPCYDMLLCEPESPTADVVDRPLLFIQVTRLACGGFVFGMHICHCMADGSGIVQFLTALTEFARGVHGAPTVRPVWEREVLTARWPPTVTRDHVEYTPLPNPGKDVLSPTDAYAHHVFFFGASEIAALRSQAPPDLRAVSSRFDLVGAFMWRCRTAALRYDPGDVVRLHMFVNARVRNRSKRPVPRGYYGNAIVFAAASVPAGELWRRPFGYALRLLMQAKARASEEGYVQSVANFNAAHRRPPFPKARTYLISDMTQAGLMAIDFGWGKPVYGGPATTMLATFHLEGRNEVGEAGVIVPIRLPNPVIERLIQEVNKGLTAGAVADAKANVVPDDCVLAKL</aaseq>

Gene Sequence

<dnaseqindica>1..450#557..1501#ATGGCCGGAGCACCGACCTTAGCCTTCTCCGTCAGGCGGCGCGAGCGCGAGCTGGTGGCGCCGGCGAAACCGACGCCGTACGAGTTCAAGATGCTGTCGGACATCGACGACCAGGACATCCTTCGCTTCAACCGCTCCGGCATCCTCTTCTACCGCCACAGCCCCTCCAAGGACGGCCTCGACCCTGTCAAGGTGATCAAGGCGGCGATCTCGGAGACGCTCGTGCACTTCTACCCCGTCGCCGGTCGGTTCCGTGAGCTGCGGCCAACTAGGAAGCTTGTGGTGGAGTGCACCGGCGAAGGCGTCGTGTTCGTCGAGGCCGACGCCAACTTCCGGATGGATGAGCTCGGGACGTCGCTGGCGCCGCCGGTGCCGTGCTATGACATGTTGCTGTGCGAGCCGGAGAGCCCGACGGCAGATGTAGTTGACCGTCCTTTGCTGTTTATTCAGGTTATTAGCATGCAAATCATTTTACAGTGAAGTAGTAAAATTCATGCATGGTACGTACTACGTCTAATAACAAATGATGGTTATTACATGCATTCGGACGACACAGGTGACGCGGCTGGCGTGCGGCGGCTTCGTGTTCGGGATGCACATATGCCATTGCATGGCGGACGGCTCTGGGATAGTGCAGTTTCTGACTGCACTGACCGAGTTCGCCCGTGGCGTGCACGGAGCCCCGACGGTGCGCCCGGTGTGGGAGCGCGAGGTGCTCACCGCCCGATGGCCGCCGACCGTCACGCGCGACCACGTGGAGTACACACCCCTGCCCAACCCCGGCAAGGACGTGCTCTCCCCCACTGACGCGTACGCACACCACGTCTTCTTCTTTGGGGCGAGTGAGATCGCGGCGCTCAGGTCGCAGGCGCCGCCCGACCTGCGCGCCGTCAGCTCCCGGTTCGACCTGGTGGGAGCGTTCATGTGGCGCTGCCGCACCGCCGCGCTGCGGTACGACCCGGGAGACGTCGTCCGCCTGCACATGTTCGTGAACGCCCGCGTCAGGAACCGGAGCAAGCGGCCCGTGCCGAGGGGCTACTACGGCAACGCGATTGTGTTCGCTGCCGCGTCCGTGCCGGCGGGGGAGCTTTGGCGGAGGCCCTTCGGCTACGCGCTGCGGCTGCTCATGCAGGCCAAGGCGCGTGCGTCGGAGGAGGGGTATGTGCAGTCGGTGGCCAACTTCAACGCGGCTCACCGGAGGCCGCCGTTCCCTAAGGCCAGGACGTACCTCATCTCGGACATGACACAGGCCGGGCTGATGGCCATCGACTTCGGCTGGGGAAAGCCGGTGTATGGAGGGCCGGCGACGACAATGCTGGCCACGTTTCACCTTGAGGGGAGGAATGAGGTTGGTGAGGCAGGCGTCATTGTGCCCATAAGGTTGCCGAATCCAGTGATAGAGAGGCTAATACAGGAGGTGAACAAGGGGCTCACTGCCGGAGCTGTTGCCGACGCAAAAGCAAACGTGGTACCTGATGATTGCGTTCTAGCAAAACTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019549