Os11g0702100

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Revision as of 09:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0702100| Description = Similar to Class III chitinase homologue (OsChib3H-h) (Fragment)| Version = NM_001075062.1 GI:115486772 GeneID:435119...")
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Gene Name

Os11g0702100

Description

Similar to Class III chitinase homologue (OsChib3H-h) (Fragment)

Version

NM_001075062.1 GI:115486772 GeneID:4351197

Length

1167 bp

Definition

Oryza sativa Japonica Group Os11g0702100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:30567399..30568565

Sequence Coding Region

30567624..30568529

Expression

GEO Profiles:Os11g0702100

Genome Context

<gbrowseImage1> name=NC_008404:30567399..30568565 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:30567399..30568565 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgccaccagctatgtctcttgacgacgacgatgctagtagccgtcgtcgtcttcctcccgtgcctcgccaccgccaccggaaagaccggccagatcgccgtcttctggggccgcaacaagacggagggctcactgaaggaggcctgcgacaccggcctctacaccaccgtcatcatctccttcttcagcgtcttcggccacggccgctactggaccgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaagaacatccccgtcctcctctccgtcggcggcgacggctaccagtactcgctccccaccgccaattcggccaaggacgtcgcggaccacctctggcacgcctacctcggcggcggccgcaggggcgtgttccgccccttcggcgacgccgtgctcgacggcgtcgacctctacatcgaccacggcgggccggcgaactacgacgtgctggtccggcgcctcgccggctaccgcggcaagccggtgctgctgacggcgacgccgaggtgcgtgtacccggacgcgaacgcggcggcggcgctggggacggggctggtgcggcgcatccacccgcggttctacggcgacgcggcgtgcacgaacaagaccgacggcgaggggcggaggagcctgttcgactgggaggactgggacgcgtggacgtcgcggttcccggcgagccaggtgtacgtggggcttccggcggaggagacggcggcggactggataaacccggagtcgctctactacgccgtgatgcagagggcgcagacagcgagcaactacggcggcgccatgctgtgggaccgaggcgccgacaaagcctacgataactactacggcagggcgctcaaggacttcgtttga</cdnaseq>

Protein Sequence

<aaseq>MARHQLCLLTTTMLVAVVVFLPCLATATGKTGQIAVFWGRNKTE GSLKEACDTGLYTTVIISFFSVFGHGRYWTDLSGHDVSRVGADVKHCQSKNIPVLLSV GGDGYQYSLPTANSAKDVADHLWHAYLGGGRRGVFRPFGDAVLDGVDLYIDHGGPANY DVLVRRLAGYRGKPVLLTATPRCVYPDANAAAALGTGLVRRIHPRFYGDAACTNKTDG EGRRSLFDWEDWDAWTSRFPASQVYVGLPAEETAADWINPESLYYAVMQRAQTASNYG GAMLWDRGADKAYDNYYGRALKDFV</aaseq>

Gene Sequence

<dnaseqindica>37..942#atcacgtactaattaagccatcgtatcatatcagccatggcgcgccaccagctatgtctcttgacgacgacgatgctagtagccgtcgtcgtcttcctcccgtgcctcgccaccgccaccggaaagaccggccagatcgccgtcttctggggccgcaacaagacggagggctcactgaaggaggcctgcgacaccggcctctacaccaccgtcatcatctccttcttcagcgtcttcggccacggccgctactggaccgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaagaacatccccgtcctcctctccgtcggcggcgacggctaccagtactcgctccccaccgccaattcggccaaggacgtcgcggaccacctctggcacgcctacctcggcggcggccgcaggggcgtgttccgccccttcggcgacgccgtgctcgacggcgtcgacctctacatcgaccacggcgggccggcgaactacgacgtgctggtccggcgcctcgccggctaccgcggcaagccggtgctgctgacggcgacgccgaggtgcgtgtacccggacgcgaacgcggcggcggcgctggggacggggctggtgcggcgcatccacccgcggttctacggcgacgcggcgtgcacgaacaagaccgacggcgaggggcggaggagcctgttcgactgggaggactgggacgcgtggacgtcgcggttcccggcgagccaggtgtacgtggggcttccggcggaggagacggcggcggactggataaacccggagtcgctctactacgccgtgatgcagagggcgcagacagcgagcaactacggcggcgccatgctgtgggaccgaggcgccgacaaagcctacgataactactacggcagggcgctcaaggacttcgtttgatcgattctcacattcaatccggccgccattgctgcttcatcggagcttcaattcgatcaacttcttcttcccaatagtatatgcatgattgtgtataataatggagccagctttgaatttgtttgcgtagcgtgtgtacgtgtgcgcgtatgtaatttgtgagtgtctctcagggtgctgtatgcttgaattaaggtacatgaacaataaattcaagtatgcact</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0702100, RefSeq:Os11g0702100