BGIOSGA019571

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Revision as of 02:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019571| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019571, complete gene.| tag = OS05G03...")
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Gene Name

BGIOSGA019571

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019571, complete gene.

LocusTag

OS05G0301500

Ensembl Transcript ID

BGIOSGA019571-TA

Ensembl Protein ID

BGIOSGA019571-PA

Length

4428

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14515542..14519969

Sequence Coding Region

14515542..14515655,14515774..14515818,14516388..14517016,14517111..14517258,14517355..14517531
,14517911..14517979,14518083..14518172,14518384..14518542,14519393..14519617
,14519778..14519969

Genome Context

<gbrowseImage1> name=IndicaChromosome05:14515542..14519969 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:14515542..14519969 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGCCACCGCCGCTCCGCCGCGTCGCCGCCCTCCTCCTCCTCCTCGTCGCCGCCGCCTCCACCCCCACCGCACGGGCCGATCTCGTCGTCACCAGGGCGGATCGGAAGGTTGACCTGACTTCGCACATCGTTCGTGTCCTCACTTCGCTCAAGGTTGAGAATAGTGGACCGGAGGCTGTTTCTCAATTTCTACTGGCGTTTCCCAATGTCCAAGCAAAGAACTTAGCAGCTATAAGAGCATTTGGTACTGAGGAAAAGGTGAAAGGTCCAAGTATGGTCCTTCCGATTGAAGTTGTTCAGCCTTCTGGAGTGCCCCCAGAACTTACATTCTTTTCGGCATCTTTATCCAAACCTTTGGAGAAGGGGAAGACTCTTCACTTAGATGTCCTGACCGTATTTACGCACTCTGTCCAGCCATTCCCCGAAGAAATCACACAAGCTGAATCGCAGCTTGTTGTCTATCAGGACAGTGCTCAGTATCTGTCACCTTACCCTGTTAAGGTACAGACACTTAGTATCAGATTGCCTGGTGGAAGAGTTGAGTCCTACACAAAGTACCCAAACACAAAACTTGCAGAGTCAGAACTAAAATATGGACCATATGAAGATCTTCCACCGTTTTCCTACTCCCCTATGGTTGTGCACTATGAGAACAATAACCCTTTTGCAGTTGCAAAGGAAGTTATAAGGGAGATAGAGATATCTCACTGGGGGAATGTACAGATTACAGAACATTACAACATTGCTCATGGTGGTGCCAAACTCAAGGGTGAATTTTCCAGGATTGATTACCAATCTAGACCGTACATAAGAGGGGTCTCATCTTTTAGGCATCTTATTGCTAGACTGCCTCCAAGGGCACATTCTATATACTACAGAGATGAGATTGGTAACATTTCAACATCACATTTATGGAGTGATTCCAAGAAGACTCAACTTGAAGTTGAGCCAAGGTTTCCTTTGTTTGGTGGTTGGCAAACGACCTTTACCATTGGTTATGGTTTACCTCTTCAAGACTTTGTTTTCAATTCTGATGGAAAGAGATTCCTCAATATCACATTTGGTTCTCCAGTGGAGGAGATTCTCATAGAAAAGCTTATTGTGAAGGTTGTTCTGCCTGAAGGTTCAAAGGATATTGATATTTCAGTTCCATTTCCAACAAAGCAAGAGCAAGAGGTGAAGTATTCACACCTTGATATTTCTGGAAGGCCAGTGGTTGTCTTGGAGAAGCTTGATGTTATTCCAGAGCATAATCTATATTTCCAGGTTTACTACAGGTTCAACAACATCTCTCTACTCAGAGAACCGATGATGTTGATAACTGGCTTCTTTCTCCTCTTCATGGCCTGTATTGTTTACATGCGCACTGACATGTCAATCTCTAAGAATTCTCCTTCTTATCTGGCAAAGGTGCAGTGGGATGAGGTACAGAGCATCATCCAGCAAATCCAGGCTATCTTCAACCAATGTCTAGCAGCTCATGATAAACTGGAGACCTCATTACACGAGTTATCTAGGTCAGGAGATGTTAAATCATGCAAAGTGGCTCGTAAGACAGCTGATGCACAGTTTAAGGAATTAGCAAAAGAGTTGAAGCCATTGTTGACATCCCTGCAGTCATCCTCTCAGTCTTACCAGATATGGCCAAAGGTAGAGGAATTGGTTGCCAAGGAGAGAGAGTTGCAGGATAAGCTCATGACAAGGCATTCCACTGTGGTTGACAGCTTTGAAAAGAAGTTGCGAGGGCAAGATGTGGAGAACAGGATTGCTGCCCAGCAGCAGAAAGTTGCTGCCCTGAGGCAAGAGGTCGAATCTCTTTTAGAGTACATCAGTGAGATCTGA</cdnaseq>

Protein Sequence

<aaseq>MATPPPLRRVAALLLLLVAAASTPTARADLVVTRADRKVDLTSHIVRVLTSLKVENSGPEAVSQFLLAFPNVQAKNLAAIRAFGTEEKVKGPSMVLPIEVVQPSGVPPELTFFSASLSKPLEKGKTLHLDVLTVFTHSVQPFPEEITQAESQLVVYQDSAQYLSPYPVKVQTLSIRLPGGRVESYTKYPNTKLAESELKYGPYEDLPPFSYSPMVVHYENNNPFAVAKEVIREIEISHWGNVQITEHYNIAHGGAKLKGEFSRIDYQSRPYIRGVSSFRHLIARLPPRAHSIYYRDEIGNISTSHLWSDSKKTQLEVEPRFPLFGGWQTTFTIGYGLPLQDFVFNSDGKRFLNITFGSPVEEILIEKLIVKVVLPEGSKDIDISVPFPTKQEQEVKYSHLDISGRPVVVLEKLDVIPEHNLYFQVYYRFNNISLLREPMMLITGFFLLFMACIVYMRTDMSISKNSPSYLAKVQWDEVQSIIQQIQAIFNQCLAAHDKLETSLHELSRSGDVKSCKVARKTADAQFKELAKELKPLLTSLQSSSQSYQIWPKVEELVAKERELQDKLMTRHSTVVDSFEKKLRGQDVENRIAAQQQKVAALRQEVESLLEYISEI</aaseq>

Gene Sequence

<dnaseqindica>1..114#233..277#847..1475#1570..1717#1814..1990#2370..2438#2542..2631#2843..3001#3852..4076#4237..4428#ATGGCGACGCCACCGCCGCTCCGCCGCGTCGCCGCCCTCCTCCTCCTCCTCGTCGCCGCCGCCTCCACCCCCACCGCACGGGCCGATCTCGTCGTCACCAGGGCGGATCGGAAGGTGAGCTCCCGCCTCGCTTCTTTGTCTCTCTGCGCGCCCTCCAGATCTCCCGACGAGCACGCCGCGCCTTCTGCCCCCGGATCTGAGGCCTCTTTGCCCTTCCTTTTCTTTTTTGCAGGTTGACCTGACTTCGCACATCGTTCGTGTCCTCACTTCGCTCAAGGTACACGCGGTTGTTGTTGCTGTGTTCTCTCGAATTTTGTTTGTCTAGTTGGGGGGAGATTCAGCCGTTCCCCGGTTCGTTCGTCCGATCTGTTAAGGGAGCTTCTCATTTCATCGTGATATAGTTCTGGATGGGTAGATGTTTGTCTCTTCATCGCTGATAATATGATAAGAGCGCTGTAATGTGTGGATGGATCATGGATGGAGTTAGCGTTTCATCATTAATGGTGTCCTGTATAGGTTCATCGCCTCGACGTGTGCTCACGAGTGCTCCAAATTCTTAACGTCTCAATTTGGGATGTTCAATTCCATGTCTCGCATGATTTGGCCTGCAGATTCTTTGGGTTGCAAGCTCTCTTCTGGTTGATTTGAAGTTGGGGTTTAACTGGCAATAGGGGTTCTGTGTTTGTCAGTGCCACCACCAATTCTAAAATCTCCGAGTAACTCTTTTTGAATTACACTTTGTCTGATGCCAGTCCTCACTAGTAGATAGAGTAATATATGGGGTTTTGTCTATGCACATGTGATATGCTGAGGTTTTGCTTTTGTTGTAATCTCTGTTTTTTTTAGGTTGAGAATAGTGGACCGGAGGCTGTTTCTCAATTTCTACTGGCGTTTCCCAATGTCCAAGCAAAGAACTTAGCAGCTATAAGAGCATTTGGTACTGAGGAAAAGGTGAAAGGTCCAAGTATGGTCCTTCCGATTGAAGTTGTTCAGCCTTCTGGAGTGCCCCCAGAACTTACATTCTTTTCGGCATCTTTATCCAAACCTTTGGAGAAGGGGAAGACTCTTCACTTAGATGTCCTGACCGTATTTACGCACTCTGTCCAGCCATTCCCCGAAGAAATCACACAAGCTGAATCGCAGCTTGTTGTCTATCAGGACAGTGCTCAGTATCTGTCACCTTACCCTGTTAAGGTACAGACACTTAGTATCAGATTGCCTGGTGGAAGAGTTGAGTCCTACACAAAGTACCCAAACACAAAACTTGCAGAGTCAGAACTAAAATATGGACCATATGAAGATCTTCCACCGTTTTCCTACTCCCCTATGGTTGTGCACTATGAGAACAATAACCCTTTTGCAGTTGCAAAGGAAGTTATAAGGGAGATAGAGATATCTCACTGGGGGAATGTACAGATTACAGAACATTACAACATTGCTCATGGTGGTGCCAAACTCAAGGGTGAATTTTCCAGGTTCTTCTCCCTTCTAACTTGTGCTTTAAATAGCTCACCTTTAGCTGGATAGAAAAAATTTGTCCAGAGATAACTGATGTGTTCAAATTTGCAGGATTGATTACCAATCTAGACCGTACATAAGAGGGGTCTCATCTTTTAGGCATCTTATTGCTAGACTGCCTCCAAGGGCACATTCTATATACTACAGAGATGAGATTGGTAACATTTCAACATCACATTTATGGAGTGATTCCAAGAAGGTACACTTGCTTTTTATTATCTCAGTTTCAAGGCTATAATATTCCCAGCAAAATTGCAAAAGTGAGTGCATATGCTGAATATTTATCCTATTGCAGACTCAACTTGAAGTTGAGCCAAGGTTTCCTTTGTTTGGTGGTTGGCAAACGACCTTTACCATTGGTTATGGTTTACCTCTTCAAGACTTTGTTTTCAATTCTGATGGAAAGAGATTCCTCAATATCACATTTGGTTCTCCAGTGGAGGAGATTCTCATAGAAAAGCTTATTGTGAAGGTATGTTCTCCTGTACCCATCTGGCACGCACGGTAAAATCTTTCATTTTTTACCCTTGTGTTCCATGTTTTGTTCTTAATTGCACTGATATAGAATTTTAGACACCAAACATAATTCCTTGTGTTGCCTATTTCTTTGATATTGAAATTAGATCTTCATTTATTGCTGGGAACCTGCAACTAACATACCCTTTTGTTGTCTTGGCTATCTTCTGGTGTATTGTCCTTCACTTAGTTATTTTTATTTTATGTTTCTAAAAAAATGTAGATGACATGTCATGGTTAGATAATCAATAAGAAATACATTTGCACATATTTCCATGAACGTGATGTTACATATTAATTTCCCTCCCTGCATAAAAACCTTTCTTTTTGAACAGGTTGTTCTGCCTGAAGGTTCAAAGGATATTGATATTTCAGTTCCATTTCCAACAAAGCAAGAGCAAGAGGTGACTTCTTGTTGGATGATACACACACACACACACACACATATATTCTGAACAACTAGCTGATCCTGTTCTTTTGTTGTAATGACAATGATTTGTGGTGCAGGTGAAGTATTCACACCTTGATATTTCTGGAAGGCCAGTGGTTGTCTTGGAGAAGCTTGATGTTATTCCAGAGCATAATCTATATTTCCAGGTTTGTCTTCAGACTTAATTTGTTGTGCAACTAATTTTACCCCTCCATGAAAAGTTGAGCGTTGCTAAATTATTAACCTGACTGAAGAGTATGTAAAATCTGCTATGCAAAAGGCTTACTGCACCATGAATACTTTCTGTGAGTTGTCTATCTCATGGTGTTTTATGTGAACCATAGCAAACTTATGGTGTTAATGCCCTACAATATGCAGGTTTACTACAGGTTCAACAACATCTCTCTACTCAGAGAACCGATGATGTTGATAACTGGCTTCTTTCTCCTCTTCATGGCCTGTATTGTTTACATGCGCACTGACATGTCAATCTCTAAGAATTCTCCTTCTTATCTGGCAAAGGTGCAGTGGGATGAGGTATGGTCGTTTTAGTCAAATCTCCCCTTTGAGGATTGGATTTTGATGATTTACGAGAAATGTTTAAATCTATCTTGCCATAACCTTTCTTCTAGTGAACTACAGTTTGTTACTATACTGCTGCTATGTTTAGGATGAGCACTAATTACAGTGAAATAAACTTATGAATCATAATTCGAATTGGTTTGCTAGCTCATACGGAGTACTATGTAGCGGTGTTATTTTTATGGGAGAAAAAAAATGCAATGATAAAAACTTGAACTAGTAAATATCAGATGACAAACATATTAGGGCCTGAGCAAATAGCTAGGAAAGGTCTCAAAATGTGCAGGGTTGAATGGTGGCCTTAAATTTTGGGGAGGGCTTGTTTACTAGTAATTTTAGTTGGATAAGTGACAAGTTTACTATCAGAATCATGTGAGAACTTTTAGTTGGATAAGTGACAAGTTTACTATCAGAATCATGTGAGAACGCTGTCCTTTCTGTTAAAGATTGGCTTTTGAGAGCTTTGGTCCAAAAATGGACAAGTTACAAGTGAAGGGTCTTAACCACGGTGGAATAGAATCTGCAAAACAAGCTCTAAATGAATCTGGAGGTAAAGAGCAGTCCATGCTGTGTTAAAAGCGAGCTTCATAATTGACAGGGAAAAAAATGTTACTTGAAAAGTCCTAAATCTTCAATCCAAACTTCAAAGTTAAGAAGATAATAATTGCGTATCATTGGTTTAAGCAGTTAAGCTGGATCAACATTAATTGTAGTGTTTCTGGAATTGAAGAATGCTTTAAACTTGTGGAGACCTCTTACTTTCTGCAGACTAACCTCTACAATCTATTTCATACTTTTTGTACAGGTACAGAGCATCATCCAGCAAATCCAGGCTATCTTCAACCAATGTCTAGCAGCTCATGATAAACTGGAGACCTCATTACACGAGTTATCTAGGTCAGGAGATGTTAAATCATGCAAAGTGGCTCGTAAGACAGCTGATGCACAGTTTAAGGAATTAGCAAAAGAGTTGAAGCCATTGTTGACATCCCTGCAGTCATCCTCTCAGTCTTACCAGATATGGCCAAAGGTTTGCTCAACGTCTTGTGCATAGACCACCTAGAAGAGAGAGATACTTACTAGTGCATCTTTATTCACCATTTAATTTGAATTTGAGTTCTTTGCCCACATTCTCTAATTAAGTATATGCGCCATAGTGGTTACAGTTGGCCTTTTTTTCTTTAATGCAGGTAGAGGAATTGGTTGCCAAGGAGAGAGAGTTGCAGGATAAGCTCATGACAAGGCATTCCACTGTGGTTGACAGCTTTGAAAAGAAGTTGCGAGGGCAAGATGTGGAGAACAGGATTGCTGCCCAGCAGCAGAAAGTTGCTGCCCTGAGGCAAGAGGTCGAATCTCTTTTAGAGTACATCAGTGAGATCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019571