BGIOSGA019575

From RiceWiki
Revision as of 02:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019575| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019575, complete gene.| tag = OsI_193...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019575

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019575, complete gene.

LocusTag

OsI_19374

Ensembl Transcript ID

BGIOSGA019575-TA

Ensembl Protein ID

BGIOSGA019575-PA

Length

5372

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14611208..14616579

Sequence Coding Region

14611208..14611705,14612474..14612726,14613357..14613436,14614047..14614189,14614308..14614386
,14614812..14614898,14615683..14616081,14616172..14616579

Genome Context

<gbrowseImage1> name=IndicaChromosome05:14611208..14616579 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:14611208..14616579 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCACGACCTTCCCCACCTCGACCCCCTTCTTCGCCCACCATGGCAGGCGGCGGCCGTCCCCGTCCGTCTCCGTCCGCACCGCCGCCGCGGTGTACGGGCGCGGCGGGGGCCGGAGGTGGCGGCCGCTGCGGGTGGCGTGCGAGAAGGTGGTCGGGATCGACCTCGGGACCACCAACTCCGCGGTGGCGGCCATGGAGGGCGGCAAGCCGACGATCGTCACCAACGCCGAGGGCGCCCGCACCACGCCGTCGGTCGTCGCCTACACCAAGTCCGGTGACCGGCTGGTGGGGCAGATCGCCAAGCGACAGGCGGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGAACGAAGTCGACGAGGAGTCCAAGCAGGTCTCCTACCGCGTCATCAGGGACGACAACGGCAACGTCAAGCTCGACTGTCCCGCCATTGGCAAGCAGTTCGCCGCCGAGGAGATCTCCGCCCAGGTGCTTAGAAAGCTGGTGGATGATGCATCAAAGTTCTTGAACGATAAAGTCACAAAGGCAGTGATCACAGTCCCAGCATATTTCAATGACTCACAAAGGACAGCAACAAAAGATGCTGGCCGGATTGCTGGGTTGGAAGTTCTCCGCATCATAAACGAGCCTACTGCAGCATCTTTGGCATATGGGTTTGAAAAGAAGAACAATGAGACCATTCTTGTTTTTGACCTGGGAGGAGGCACATTTGATGTTTCAGTTCTTGAAGTTGGTGATGGTGTTTTTGAGGTGCTGTCTACATCTGGTGACACTCACCTTGGTGGTGATGACTTTGACAAGAGGGTTGTTGATTGGCTGGCGGGGAACTTCAAGAATGATGAAGGTATTGACCTACTAAAAGACAAGCAGGCCTTGCAACGTCTTACAGAAGCAGCTGAGAAGGCAAAGATGGAGCTATCATCCTTGACCCAAACAAATATCAGTTTACCCTTCATTACAGCTACTGCTGATGGGCCCAAGCATATCGAGACAACTCTTACCAGGGCTAAATTTGAGGAGCTATCTACTTTACATCGTATTGTGGATGCCCTTAGGCGATCGCTCTCTCTACTCCCTACGGCATATAATGACCAAAGTGCAAGTAACCAGGCAGGAGTGTTGTCTGGTGATGTGAGCGACATTGTTCTTCTTGATGTAACACCACTTTCTCTGGGTTTGGAGACACTGGGTGGTGTGATGACCAAGATTATCCCAAGGAACACAACTTTGCCCACCTCCAAGTCAGAGGTCTTCTCAACCGCTGCTGATGGCCAGACTAGCGTGGAGATCAATGTCCTCCAAGGAGAGAGAGAGTTTGTCAGGGACAACAAATCTCTTGGTAGCTTTCGGCTTGATGGAATTCCTCCTGCCCCACGGGGTGTTCCACAAATCGAAGTTAAGTTTGACATCGATGCCAATGGCATCCTTTCTGTCAGCGCCGTAGACAAGGGTACTGGAAAGAAGCAGGACATTACGATAACTGGTGCCAGCACATTGCCGAAGGATGAGGTGGAGAAGATGGTTGAAGAAGCAGAGAAGTTTGCCAAGGAGGACAAAGAGAAGAGGGACGCAATCGACACCAAGAACCAGGCAGAGTCTGTCATCTACCAGACTGAGAAACAATTGAAGGAGCTCGGTGACAAGGTCCCAGGCGATGTGAAGGGTAAGGTTGAGGCGAAGCTGACGGAGCTCAAGGACGCTGTTGCAGGTGGCTCGACACAGACGATGAAGGATGCTCTCGCTGCTCTGAACCAGGAAGTGATGCAGCTGGGGCAGGCCCTCTACAGCCAGCAGGGTGCCCCAGGAGCAGGACCTACCCCAGGAGCTGATGCTGCCGCTGGCTCTGCTGGCCCATCCGAGAAGCCAGGAGGCGAGGAAGGTGATGTCATCGATGCTGATTTTACAGACAGCCAATGA</cdnaseq>

Protein Sequence

<aaseq>MATTTFPTSTPFFAHHGRRRPSPSVSVRTAAAVYGRGGGRRWRPLRVACEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGARTTPSVVAYTKSGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMNEVDEESKQVSYRVIRDDNGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVTKAVITVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAGNFKNDEGIDLLKDKQALQRLTEAAEKAKMELSSLTQTNISLPFITATADGPKHIETTLTRAKFEELSTLHRIVDALRRSLSLLPTAYNDQSASNQAGVLSGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPKDEVEKMVEEAEKFAKEDKEKRDAIDTKNQAESVIYQTEKQLKELGDKVPGDVKGKVEAKLTELKDAVAGGSTQTMKDALAALNQEVMQLGQALYSQQGAPGAGPTPGADAAAGSAGPSEKPGGEEGDVIDADFTDSQ</aaseq>

Gene Sequence

<dnaseqindica>1..498#1267..1519#2150..2229#2840..2982#3101..3179#3605..3691#4476..4874#4965..5372#ATGGCGACCACGACCTTCCCCACCTCGACCCCCTTCTTCGCCCACCATGGCAGGCGGCGGCCGTCCCCGTCCGTCTCCGTCCGCACCGCCGCCGCGGTGTACGGGCGCGGCGGGGGCCGGAGGTGGCGGCCGCTGCGGGTGGCGTGCGAGAAGGTGGTCGGGATCGACCTCGGGACCACCAACTCCGCGGTGGCGGCCATGGAGGGCGGCAAGCCGACGATCGTCACCAACGCCGAGGGCGCCCGCACCACGCCGTCGGTCGTCGCCTACACCAAGTCCGGTGACCGGCTGGTGGGGCAGATCGCCAAGCGACAGGCGGTCGTCAACCCGGAGAACACCTTCTTCTCCGTCAAGCGCTTCATCGGCCGCAAGATGAACGAAGTCGACGAGGAGTCCAAGCAGGTCTCCTACCGCGTCATCAGGGACGACAACGGCAACGTCAAGCTCGACTGTCCCGCCATTGGCAAGCAGTTCGCCGCCGAGGAGATCTCCGCCCAGGTATAGGGGTGGCTTACGCTTTGTGATTGTTTACCATGTGTTGGAATTGATCATCAATTGAGGGGTTCTGACGGCTAGAATCTAGAAAGAATGCTTTGGAAGATGGAATCCTGTTGCGTTGCTTAGATGTGGCCAGTTTTGATTTCTAGCTTATAGGATCGTGACTGTTCATGAAGCTCTATGGAATAATGGGTTAATGGTTAATTGCTTAATCTCGCCTTGACTTCTCTTGATGCCAACAATAGCACAGCTTCCATAACAGTGTTTTTGGTGTCTCACAAATAGAATCCCATCCTGTATGCTTTGTTTAGCATATTCTTCACAAAACTATAGAATTCTTTTTTTTTTTTAAAACGGCACTTCACAAAAGGGAATGCAGGTAGTAGGATATTTGTACTGAACAGCCCTTGCTCTTTGTATATATCTAAATATGTGCACGTGGATTTTTGATGCAGTCTATATATATATATGGACTGAGTTAGACATCTTATATGCTTTGAGCTTGACAGCTTATAGTGCAAATCCTGTGGGTTCCCTTCATGTTTGCTTTGTTTTCATCAGTACAATATTTCCTACTGGTGTTCTTTCATCAATTACTAGGCCTAGATGGGTAATTTTGGTGGAGTCGAATGTGCCATTTTCTTTTGGGGATCTGTTGGCAAAAACTGAAATAGCATGTGCATGCAAATGTTTTATGTATGCCTGCAAAATAAGTTTTATGGTTCAAATTGTTTTTAATCCGAGTGTTGATCATTTTATGTTCTCCAGGTGCTTAGAAAGCTGGTGGATGATGCATCAAAGTTCTTGAACGATAAAGTCACAAAGGCAGTGATCACAGTCCCAGCATATTTCAATGACTCACAAAGGACAGCAACAAAAGATGCTGGCCGGATTGCTGGGTTGGAAGTTCTCCGCATCATAAACGAGCCTACTGCAGCATCTTTGGCATATGGGTTTGAAAAGAAGAACAATGAGACCATTCTTGTTTTTGACCTGGGAGGAGGCACATTTGATGTTTCAGGTATCTATCCTACAATTACGGTGCCTTTCTGAACACTATTTGCAACTACAAGTTTTAACCAGTTATTGTTGTTTTAACCACTATTTGCATCTTTTCACGTACTCTGTTGTAGTGTATTTTTTATTGACATAACATAACCAAGTGAAGTATTTGTCAAAAAACTAAAAATAAAAACATTTTTTCTTGCTGTTATGGACAATTATTTTTTCAGTTATTTAATTACATTCAGTTGTAGTTCTGACAGTTGTAATGAATTTTCAAAGGCTAATGCTGGTCTAAACAACTTTTTGCTCAGTGCTATGAGGACTCTGTATGTTCAAATACTACGATCTTATGGCAATAGTAGCAATTTTCCAAATACGTTGTGATAATTTGTGACAGGAGAATGATTAGGTTCCTCAGAAAAGGGGCATTTCCAGACTGAAGGAATTATTATAGTAACATTATGCCGTTATGGTCACATTGTGTTGTGTTGATAAGATCAAATCTGTTCTATTGAACTTTGTTTATCCATTCATCCTTCTGGGTGTACTTCATTTTGGTTCGTCTGTCAAATGTTAATTAAATTAACACTTTTCATCTCTTAAATGAGAATTCAGCTCCTAACTATATTTTGGGTGATGATTTCAGTTCTTGAAGTTGGTGATGGTGTTTTTGAGGTGCTGTCTACATCTGGTGACACTCACCTTGGTGGTGATGACTTTGACAAGGTTAGTTTTGCTTTCCGAGATTTCAAGGAACAGTCTTTTTCAATATATAAAATTAAGTTTTTAGTAGTATTAATGTGTTGATATGGACTCAAGTTTTGAACTATACATATCGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGACTCAATTAGTTTCGTAGTGAAGTATATTCCATCCAAATCTTTGATTATTTATGAGCCTTTAATTCTGGGTGATTAGGGGATGATAAGTTGGCAGTAAATTCAGTACTACATATATATGCCCTATGGTTTTTCTTGAAGTTCTTAATCTCTAGTCAAACTGGGGACAGTGAATAAATAATAAATTTCTCTATGGTGGAATTTTGGATGCCTGAATTATTTGAATCTTCATTAAACATGTACGATATGATGAAACAAATGGATGGACCGACTCAGTAATCGTAATATTCTAATTCATCATTTGGTAATCATATCTTTTGCTTAATTTGAAGGGTCTTACGTCATGTATATTTGTTATAATTTTCTGTAGCTGCTAGATCTTTTAGCATCATTTCTTACTGTTCTACAAGATGTATATGCTCACAAATCATTGTCATTGGCAGAGGGTTGTTGATTGGCTGGCGGGGAACTTCAAGAATGATGAAGGTATTGACCTACTAAAAGACAAGCAGGCCTTGCAACGTCTTACAGAAGCAGCTGAGAAGGCAAAGATGGAGCTATCATCCTTGACCCAAACAAATATCAGGTTAGCTTGCTTGACCGCCTTGATTTGCTGCAGCATTGTGCTATTGGACTGTTTCCTTTTGGGTAGCAATCCTTTGATTCCCTTGGTTGATTCTAACCATTGGTTATGCTTCTTTCAGTTTACCCTTCATTACAGCTACTGCTGATGGGCCCAAGCATATCGAGACAACTCTTACCAGGGCTAAATTTGAGGAGCTAGTCAGATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTATCGAAATGCTAATTAGCGGGTGATGCTCCCCGCGATCTTTTTTTTCCTTTCTCCATTTGTGCCTGGGGCACGGGCCAATCACGCGCCGCGGGTGATGGCGCATTAGGGCATCACCAATATATATGGATAAGTGATCCATATATAGATGGGACCCACATAAATAGTTTATCTCTATGGCAAGGGTCCACAATGTATATAGATACAATGTATCATTAGGAGAAGAGAGAGGAGTAGAGATAGATAATATAATTTATTCTATATGGGTAGTCTATATGCATATGGATATCTTTTGCTATTTTTCTATATGGACTAGTTGCACAATAGTAATAGATGGCTAAATGGAATATTCTATTGCTTATAGTCTACTTTACATCGTATTGTGGATGCCCTTAGGCGATCGCTCTCTCTACTCCCTACGGCATATAATGACCAAAGTGCAAGTAACCAGGTTGGTAGAGGCCTATAGGGTTTGGTTTTGCCTAATTTTTTTTAAGTCGATCATATAGATTAGAGTAACACGTATTACACAGTAGTAGACTAGACAATCATACCACACCGTAACGCATATGGATAGCTATCACTATCTTACGGTATGTTTTACCAATATATTTCCTTAGTCAGACTCGTTCAAAGATAATATTTGATATCTATCCGGACTATTGCCGATTCCTTACTTCATTTCGAAGGTATTTAATTAAGCAAATTATTTGACTAATTTACCCTTAATTAAGCAAGTCTTATTTTTTTATACGACCTTTGTTTATGTGGTTCGCTTTCTCCAAAATGCCGGTAATGAAAACTTCCTGCTTTCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTAGTAATATGAAATCTGCGGAGAATGTGACGATATACAAATGATCCTTAAAAAAATGGTTTGAAATGGATGCGATGGGTAAAGGCCTTGTCATCACAACCAACTCCTTTGTCAGGTTCTGGAGATATTGGTTGGGAAAAATATGTTGTCATAAAAACTGAAGTTCAATATGTTGCTCTAGATAAATAATGTCAGGCAAGACTCGATGGAATTTAGTACATCATATGCATGGTATCTAAATTTTAGCTATAGGGAGCAATCAGTGTGTGTCTCACTGGTGTTCTAGGATTGATTATCTTCTAGAGTCAGAAAGCAAATGTACTCTACTGAACTACAGAATATCTGACTGGCAAAATTTTGACAACAGGCAGGAGTGTTGTCTGGTGATGTGAGCGACATTGTTCTTCTTGATGTAACACCACTTTCTCTGGGTTTGGAGACACTGGGTGGTGTGATGACCAAGATTATCCCAAGGAACACAACTTTGCCCACCTCCAAGTCAGAGGTCTTCTCAACCGCTGCTGATGGCCAGACTAGCGTGGAGATCAATGTCCTCCAAGGAGAGAGAGAGTTTGTCAGGGACAACAAATCTCTTGGTAGCTTTCGGCTTGATGGAATTCCTCCTGCCCCACGGGGTGTTCCACAAATCGAAGTTAAGTTTGACATCGATGCCAATGGCATCCTTTCTGTCAGCGCCGTAGACAAGGGTACTGGAAAGAAGCAGGACATTACGATAACTGGTGCCAGCACATTGCCGAAGGATGAGGTATGTCTCGAGCAAACTCGCAGTCACTGTCTTATTGACTAATACCTGCTAGGATCTTATATTGACTTATATCCATCAAAAACTGTTCAGGTGGAGAAGATGGTTGAAGAAGCAGAGAAGTTTGCCAAGGAGGACAAAGAGAAGAGGGACGCAATCGACACCAAGAACCAGGCAGAGTCTGTCATCTACCAGACTGAGAAACAATTGAAGGAGCTCGGTGACAAGGTCCCAGGCGATGTGAAGGGTAAGGTTGAGGCGAAGCTGACGGAGCTCAAGGACGCTGTTGCAGGTGGCTCGACACAGACGATGAAGGATGCTCTCGCTGCTCTGAACCAGGAAGTGATGCAGCTGGGGCAGGCCCTCTACAGCCAGCAGGGTGCCCCAGGAGCAGGACCTACCCCAGGAGCTGATGCTGCCGCTGGCTCTGCTGGCCCATCCGAGAAGCCAGGAGGCGAGGAAGGTGATGTCATCGATGCTGATTTTACAGACAGCCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019575