BGIOSGA019578

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Revision as of 02:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019578| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019578, complete gene.| tag = OSGDI2|...")
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Gene Name

BGIOSGA019578

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019578, complete gene.

LocusTag

OSGDI2

Ensembl Transcript ID

BGIOSGA019578-TA

Ensembl Protein ID

BGIOSGA019578-PA

Length

4408

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14708525..14712932

Sequence Coding Region

14708525..14708611,14708997..14709059,14709219..14709302,14709687..14709794,14709948..14710120
,14711121..14711232,14711355..14711435,14711542..14711604,14711695..14711796
,14711994..14712118,14712247..14712457,14712545..14712619,14712879..14712932

Genome Context

<gbrowseImage1> name=IndicaChromosome05:14708525..14712932 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:14708525..14712932 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGAGGAGTACGACGTGATCGTGCTGGGGACGGGCCTCAAGGAGTGCATCCTCAGCGGCCTCCTCTCCGTCGACGGCCTCAAGGTCTTGCACATGGATAGGAATGACTACTATGGAGGAGATTCCACCTCGCTCAACCTTAACCAGCTGTGGAAGAGGTTTAGAGGGGAAGACAAACCCCCGGCTCATCTGGGCTCAAGCAAAGATTACAATGTAGATATGGTCCCAAAGTTTATGATGGCAAATGGGACACTGGTTAGGACCCTCATTCACACTGATGTGACAAAGTATTTGTCATTCAAAGCTGTCGATGGAAGCTATGTCTTCAGCAAAGGGAAGATTCACAAGGTACCTGCTACTGACATGGAGGCTCTGAAGTCCCCTTTGATGGGTCTTTTTGAGAAGCGCAGAGCAAGGAACTTCTTCATTTACGTCCAAGATTACAATGAAGCTGATCCAAAAACACATCAAGGGTTGGATCTTACTACAATGACAACTAGAGAACTGATAGCAAAATATGGTTTAAGTGACGATACCGTGGATTTCATCGGTCATGCACTTGCTCTTCATAGAGATGATCGCTACCTTAATGAACCAGCAATTGATACTGTAAAAAGGATGAAACTATATGCAGAGTCCCTTGCACGTTTTCAAGGAGGCTCACCTTATATTTATCCACTCTATGGGCTGGGTGAGCTGCCACAGGGTTTTGCTCGTTTAAGTGCTGTTTATGGTGGCACTTACATGTTAAATAAGCCGGACTGCAAGGTTGAATTTGATATGGAAGGGAAAGTCTGTGGCGTTACTTCAGAAGGTGAAACTGCAAAATGCAAGAAAGTTGTTTGTGATCCTTCATACTTACCTAACAAGGTTAGGAAGATAGGGAAAGTTGCACGAGCAATTGCTATAATGAGCCACCCAATTGCAAGCACAAATGACTCTCACTCAGTCCAGATTATTTTGCCACAGAAACAACTTGGACGCAAGTCAGACATGTATGTCTTCTGTTGCTCATACACACACAATGTCGCTCCAAAGGGGAAGTTTATTGCATTTGTATCTACAGAAGCGGAAACTGACAATCCACAGTCCGAGCTAAAGCCTGGAATTGATCTACTTGGTCAAGTAGATGAGCTATTTTTTGATATCTATGATAGATACGAACCTGTGAATGAACCATCTCTTGATAATTGTTTTGTCTCAACTAGCTATGATGCCACCACACATTTTGAGACAACGGTGACAGATGTTCTTAACATGTATACATTGATCACCGGAAAGGCTGTTGATCTCAGTGTTGATTTGAGTGCTGCCAGTGCCGCTGAAGAATATTAG</cdnaseq>

Protein Sequence

<aaseq>MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKRFRGEDKPPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKSPLMGLFEKRRARNFFIYVQDYNEADPKTHQGLDLTTMTTRELIAKYGLSDDTVDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFARLSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETAKCKKVVCDPSYLPNKVRKIGKVARAIAIMSHPIASTNDSHSVQIILPQKQLGRKSDMYVFCCSYTHNVAPKGKFIAFVSTEAETDNPQSELKPGIDLLGQVDELFFDIYDRYEPVNEPSLDNCFVSTSYDATTHFETTVTDVLNMYTLITGKAVDLSVDLSAASAAEEY</aaseq>

Gene Sequence

<dnaseqindica>1..87#473..535#695..778#1163..1270#1424..1596#2597..2708#2831..2911#3018..3080#3171..3272#3470..3594#3723..3933#4021..4095#4355..4408#ATGGATGAGGAGTACGACGTGATCGTGCTGGGGACGGGCCTCAAGGAGTGCATCCTCAGCGGCCTCCTCTCCGTCGACGGCCTCAAGGTACCCCTCTCCTAACCAATCCATCCGCCGCCTCCCGTGCTCGGATCGGTGCTCCCCATCGTCGTCGATCCGTAGATCGCCCCCCACTTCATCTCATCTGGGCTTGACGCTGCCGCACTCGGATGAGCTGCTGCCATTTTGATCGCTGATTTACTTAGCTATGCGAGCGTAGCGGGATGGTAATTTGTCCGTACATCGTGGCTGGGTAGGTGGTGGCGCCATGGTTGTGGTGGTTGCTTTGCGTTTGGGGGAGGGATCGTCAGTGCGTGCCTGAGCTTACGACTTCCCTTATCCCATTTAAAAGAGTAGCGGCATAGCGATTTTGGGGGATTTCACAACAAGATCTAACTAAACAGATCGGATGCACTTTTCAATGTTTTTGCAGGTCTTGCACATGGATAGGAATGACTACTATGGAGGAGATTCCACCTCGCTCAACCTTAACCAGGTAAGCAAACTGCAATGAACTTAATTTGACCAGTACAGGGTCTATATCTTGTCGTCATATCATGTCAAGGAATGCTTATGTTATTACAGAGTACATTATTTCTTTTAATTTTTTGTCCTTGTTCACTGACATTGTTTTCCACTTCGCTTTTTGGAATAGCTGTGGAAGAGGTTTAGAGGGGAAGACAAACCCCCGGCTCATCTGGGCTCAAGCAAAGATTACAATGTAGATATGGTCCCAAAGGTGCAACTGTCACTTTCCCCCATCATAATCTATCTTGCTTCTATATTTAGTATTAGCAGCTAACGTACGTGGCAGTGAGGTACCATATAGGTGGGGAACCTCAAAAACAGAAATCCCGTGATGGTGCATAAGTTCATCTTGATGAGAACATTTAGATCCTTTTATGTTACAAATGTGGTTATTCACTGGTTTAGAAAACTATGTAATCTCATGTGTATAATACTCAAATGGAAAAAAAGGTCTGAAAAGTAATGATTGTCCTGATTTTTGTTGATTGTCAATTAGTTGGATGGTTTATTACAAGCGATACCACTATGGTTCCTTGAGTAGTGTATTGTTGTTGCATGATTATCTAAAGTTCTCTCTTTTTTTTTATCTCGGCAGTTTATGATGGCAAATGGGACACTGGTTAGGACCCTCATTCACACTGATGTGACAAAGTATTTGTCATTCAAAGCTGTCGATGGAAGCTATGTCTTCAGCAAAGGGAAGGTAACATCTTCAGCTCATTTCCTCTGTTTTCATTAGCATCACATTTCCTCTAGTGTTTTATACTTTTATCTAAGTGGTTGTTGGATCTATATTCTGATCTTATTCCTATGCTAGCAGTGTAACATGCACTTTTCTATTTTTGCTGTCAACCAGATTCACAAGGTACCTGCTACTGACATGGAGGCTCTGAAGTCCCCTTTGATGGGTCTTTTTGAGAAGCGCAGAGCAAGGAACTTCTTCATTTACGTCCAAGATTACAATGAAGCTGATCCAAAAACACATCAAGGGTTGGATCTTACTACAATGACAACTAGAGAACTGATAGCGTGAGTACACTAGTGTTTCTTGCACTGTATTCAACCCTTTCTCAGTAGTGCATGGCTTCCTTTTCTAAATGAAACAATAGATTTGGGGCATATATACTATATTTATATGGGATATATTGTTGTAGACTTATACATGCCCTAATGCATACGTGAAATGTCAAACATAACGACAGTGTGCGGGCACCGGCGCATACATGAAACCACGTAATATGAAAAAAAGAAAATGTGCACTTCATAGCAAAGAGAACATCCATTGTATCATCTGTCCATTGTGTAGAACTTTAGAAAGGGTACGATAGACAGACTTTTGCATGGAATCCATATGTGGCACATGGCAGTCTTTACATGCGTAGCAACACCCTAAAACTTACTGGTCACTAATGATTGCTAAATTTAGAATAACTGTTGATATGACTGAAAGATTTCTCTGGATAAAATTACCTTGGTATTAGAAACCAGCGTACTTAAATTTATTTTTTTCGATCTGACACGGGAGTACTTAAGATACGGATGCAGTTACATTATTGAACCAAGCAACACATTTATGTTATATGCTGCATGCTGTGGTACTGCATTACAAGCCTACTTTGTGCTGCTCATGAAATGTAGAAACCTTGATATCCCTTTTAGGGAAAATAAAGTATGAAAGCAGAGGCATCAGAGCATGGGTTGGGTATCTAGTGTGTCACATCAATGAGATTCTCACTGCAAAATTTTAATTTGCGTTATTTTTAATTTGTTGTGTCTTGACTAATGTGGACCCACTTAAATATAGATTAGCTTCTATTGTAACTTGTAAGAAGACTTACATCCTGATGGATATTCTTGTCGTCTTCTAGTAGTTGTGTTCTGACAAAAAAGTAGTACAAATAATTGCCGCCACAGAATATATCATCAATTTACCTTCAGTCTTTCACATGATGCAAAAGGATATATCTATGCTTCTTTTACCTTTTCTGCATATAAATAACTCTGTTTCCATTTGCCCTTTCTTTTCCAGAAAATATGGTTTAAGTGACGATACCGTGGATTTCATCGGTCATGCACTTGCTCTTCATAGAGATGATCGCTACCTTAATGAACCAGCAATTGATACTGTAAAAAGGATGAAAGTAAGTATTGATCAAAGCTCCTGTAGATTGTTCGTAGTCTTCTGCTACGGATATCCTGCTGTTCTCTGAATATTCATGCTTTATGAAGTTCAATTACATTTTAGTGCTTTATCTACTTGTAGCTATATGCAGAGTCCCTTGCACGTTTTCAAGGAGGCTCACCTTATATTTATCCACTCTATGGGCTGGGTGAGCTGCCACAGGTTAGTGAAATTTTAATGTTAAGTAAATACCTGTCATACTGCATGTGCATGTTTTTAAGATGGTCATATATAACGCTTTCTTATTCAAATATTTCTTATTCCACAGGGTTTTGCTCGTTTAAGTGCTGTTTATGGTGGCACTTACATGTTAAATAAGCCGGACTGCAAGGTGTGATTACCATCAACCCTGTCATTACTTGCATCTCTGGATGACCAGACAACCTAATAAAACTTTTTGGCATGCCATACATGATCTTAGGTTGAATTTGATATGGAAGGGAAAGTCTGTGGCGTTACTTCAGAAGGTGAAACTGCAAAATGCAAGAAAGTTGTTTGTGATCCTTCATACTTACCTAACAAGGTTAATTTTCTTTCCTGTATTCAATTTATTTACCACATGAATTTTCTTTCAGTATGTTCATTTAGGATTCCTAGATGATGTACTTCCATCTTAACACATTCACAGCAAATTTACTATTTTTTCTTCTTCCCTTCCATTTGTTGAGAAGTTTTATTAACTACAACCACATTTGATGTTCTGTATACATTTATTAACAGGTTAGGAAGATAGGGAAAGTTGCACGAGCAATTGCTATAATGAGCCACCCAATTGCAAGCACAAATGACTCTCACTCAGTCCAGATTATTTTGCCACAGAAACAACTTGGACGCAAGTCAGACATGTGAGGCCTTTCTCAATCACAAACAAATACTGCTCACCTTATGAATTATTACATTTGCTTGCCCATTGCTTTTAACAAAGTTTATTTATTCCCATTTTGTAACATTTTTATTGGTATTCTCCTGTTAGGTATGTCTTCTGTTGCTCATACACACACAATGTCGCTCCAAAGGGGAAGTTTATTGCATTTGTATCTACAGAAGCGGAAACTGACAATCCACAGTCCGAGCTAAAGCCTGGAATTGATCTACTTGGTCAAGTAGATGAGCTATTTTTTGATATCTATGATAGATACGAACCTGTGAATGAACCATCTCTTGATAATTGTTTTGTCTCAACTGTAAGTTTTGCAATATCTGATTTTTGAAATGAGCATTAAGTTTGATTGTCTAGACTGTAACATATTTCTGGTCCACACTCCCTGCAGAGCTATGATGCCACCACACATTTTGAGACAACGGTGACAGATGTTCTTAACATGTATACATTGATCACCGGAAAGGTAGATGTGCTTCCTCCTTTCATTTTCTTTAATCTTTAATACATGTAATGCTTCTAAATTTTGTTTGAAACACCTTTTTTTGGAAAGGATGAAAATTAGCCGGGAGGCTATAGAGAGGACTAGAGTACCACATGTTGTAATAGCTTGACTTTTGTGTCACCTTAAATTCTAAATCCAAATCCATTCTGTTGGCTATTGTTTGTTTTACAATTATGTATTCTACCCTTTTCCTAATTCTTTTCTCATTGCACTATTGCAGGCTGTTGATCTCAGTGTTGATTTGAGTGCTGCCAGTGCCGCTGAAGAATATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019578