BGIOSGA019586

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Revision as of 02:53, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019586| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019586, complete gene.| tag = OS05G03...")
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Gene Name

BGIOSGA019586

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019586, complete gene.

LocusTag

OS05G0305900

Ensembl Transcript ID

BGIOSGA019586-TA

Ensembl Protein ID

BGIOSGA019586-PA

Length

5417

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:14846276..14851692

Sequence Coding Region

14846276..14846363,14847024..14847150,14847281..14847352,14847515..14847589,14847726..14847797
,14847913..14848074,14848162..14848236,14848316..14848387,14848476..14848544
,14848632..14848700,14848791..14848865,14848958..14849029,14849104..14849235
,14849379..14849797,14849878..14850009,14850100..14850239,14850346..14850565
,14850737..14850972,14851168..14851692

Genome Context

<gbrowseImage1> name=IndicaChromosome05:14846276..14851692 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:14846276..14851692 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGAAGAGGCGGCTGTTCTTGCTGCTGTTCTTGTGCTTGTTGGCTGGGTCAAGAATCGCTTCCGCTGACACCAATCCGCAAGATGCGGCTGCGCTAAGATCTTTGATGAAGAAATGGACAAAAAATGTGCCTGCTAGCTGGAGGAAGTCCAATGATCCTTGTGCGAGATGGGATGGAATTACATGTGATAGGAACTCAAGGGTTACATCACTAAATTTATTCGGTATGAACTTGGAAGGGACTCTAAGTGATGATATCGGAAACCTGACTGAACTGACGGTCTTGGATTTATCCTCAAACAGAGGTCTTGGTGGTACTCTCACACCGGCTATTGGGAAGTTGGCTAACCTTAGAATTTTAGCATTGATAGGTTGCAGTTTCAGTGGTAATGTTCCAAGTGAACTAGGGAACCTGTCACAACTCGATTTCCTCGGCCTGAACTCCAACCAATTCACGGGCAAGATTCCGCCATCATTGGGCAAGCTGTCCAAGGTTACTTGGCTAGACCTTGCTGATAACCAGTTGACCGGACCAATCCCAAACTCCAGGGACCATGGATCTGGGTTTGATCAGCTACTTAAGGCCCAACACTTCCATCTCAACAAAAATAAGCTGCAAGGTTCGGTCCCGGATTTTTTGTTCAACTCCAGCATGGATGTCAAGCATATACTTTTTGACAGGAACAACTTTAATGGATCTATTCCAGCGTCTATTGGGGTACTTCCAAAACTTGAAGTACTCCGTTTAAATGACAATGCTTTCACGGGTCCGGTTCCTGCAATGAATAACCTGACGAAGCTCCATGTTCTAATGCTGTCAAACAACAAGTTAAGTGGACTGATGCCTAACTTGACTGGAATGGATATGCTCGAAAATGTGGATCTAAGCAACAACAGCTTTATACCTTCTGAAGTTCCAAGTTGGTTCACAAGTTTAATCAAATTAATGACCCTCAAAATGCAGTCAGTAGGTCTTTCTGGGCAACTGCCGCAGAAGCTTTTCAGCAACCCCAACCTGCAATATGTAGTATTGAGTGACAATCAATTGAATGGTGTACTTGACATGGGCAATATCAGCGATGAACTTCATGTCGATGTACGGAACAACAAAATTATCTCACTTGCAGTGTACAACAGCTTCACAGGAGAAACCCTTGAGCTTGCAGGAAACCCAGTCTGTGGTGATTCACTTCTGTCAAGCATGAAGCCATGCACAGACCTGACAACTGAACCTCTACACAAGCCTCCTTCCATTGATGTTCAGTGTGCAAATCCATTTGTCGAAACCATCGTTTTTAGAGCTCCTTCTTTTGGAGATGTTGTTAAGTTCCTTCCTTCGCTGCAAGCCAACCTCTCAAGCAAACTAAACAGCTGCACCCCGAACAACCTAGGCCTGGTGTACTCGAATGATGATGCATACCTGAACGTGGATATCAGAGCATGCCCAGTAAACCAGAAGAGATTTAACTACTCCCAGGTGCTAAACTGCTTCAATCTAACCCTTCAGACTTACAAGCCACCAGAGATCTTTGGACCTTACTACGTGAAGGCACACCCTTATCCATTCCATGATAAAACTTCTCGAGCTGTGTTGATTGGTGTTGTGACTGGATCCCTTCTCCTCGTTATTGGGCTCACACTTGTTGGAGTTTACGCTGTGCGGCAAAAGAAGCGGGCTCAGAAACTTGTTTCTATCAATGATCCTTTTGCATCATGGGGATCAATGGGACAAGATATTGGTGAAGCACCGAAAATCAAGAGTGCTAGATGCTTCACACTGGAAGATCTCAAGTTGAGCACAAATGATTTCCGAGAGATTAACGCAATTGGGGCAGGAGGATATGGAACGGTGTACCGAGGAAAGCTTCCTGATGGACAACTGATAGCCATCAAGAGGTCTAAGCAAGGGTCCATGCAGGGTGGGCTTGAGTTCAAGACAGAAATCGAGCTCCTTTCTAGAGTCCATCACAAGAACTTGGTTGGTCTTGTTGGTTTCTGCTTTGAGAAGGGAGAAAGGATGCTTGTTTACGAGTTCATACCGAATGGAACGCTAAGTGAGGCCTTGTATGGTATAAAAGGAGTACAATTGGACTGGAGTAGGAGACTTAAGATAGCTCTGGATTCAGCTAGAGGGCTAGCGTACCTCCATGACCATGCCGATCCTCCAATCATTCACAGAGATGTGAAGTCCACCAACATCCTCTTGGATGAGAGGATGACCGCGAAGGTCGCAGATTTCGGTCTCTCCTTGTTGGTATCAGACAGTGAGGAAGGCCAGTTCTGCACCAACGTCAAGGGAACACTGGGATACCTGGACCCGGAGTACTACATGACACAGCAGCTCACAGCGAAGAGCGATGTGTACAGCTTCGGGGTGGTTCTTCTAGAGCTCATAGTGGCGCAGCCACCCATACACAAGCAGAAGTACATCGTCCGGGAGGTGAAGACGGCACTGGACATGGGAGACCAAACGTACTGTGGCCTGAAGGATGTGATGGACCCGGTTCTTCAGAAAACAGGGGATCTCCGTGGTTTCGCAAGGTTCCTGAAGCTGGCATTGCAGTGTGTCGAAGATCTAGGAACCGACCGGCCATCGATGAACACCATAGTGAGGGAGATTGAGGTGATAATGCAGGACAACGGGATCAGAACTGGCATGTCATCGACGAGCTCTTCGTTCAGCATCGACTCGAGAACGATGATGGCCGCGCCAAAGTACCCATACTCCAACGCATCGACATCGTCGACGGCGTTTGATATGGATAGCAGGGCCTTTGAGTACAGTGGGAAGTTCCCTTCTGAAGGCAGCCTGAAGAACAGGGGGACGTAG</cdnaseq>

Protein Sequence

<aaseq>MVKRRLFLLLFLCLLAGSRIASADTNPQDAAALRSLMKKWTKNVPASWRKSNDPCARWDGITCDRNSRVTSLNLFGMNLEGTLSDDIGNLTELTVLDLSSNRGLGGTLTPAIGKLANLRILALIGCSFSGNVPSELGNLSQLDFLGLNSNQFTGKIPPSLGKLSKVTWLDLADNQLTGPIPNSRDHGSGFDQLLKAQHFHLNKNKLQGSVPDFLFNSSMDVKHILFDRNNFNGSIPASIGVLPKLEVLRLNDNAFTGPVPAMNNLTKLHVLMLSNNKLSGLMPNLTGMDMLENVDLSNNSFIPSEVPSWFTSLIKLMTLKMQSVGLSGQLPQKLFSNPNLQYVVLSDNQLNGVLDMGNISDELHVDVRNNKIISLAVYNSFTGETLELAGNPVCGDSLLSSMKPCTDLTTEPLHKPPSIDVQCANPFVETIVFRAPSFGDVVKFLPSLQANLSSKLNSCTPNNLGLVYSNDDAYLNVDIRACPVNQKRFNYSQVLNCFNLTLQTYKPPEIFGPYYVKAHPYPFHDKTSRAVLIGVVTGSLLLVIGLTLVGVYAVRQKKRAQKLVSINDPFASWGSMGQDIGEAPKIKSARCFTLEDLKLSTNDFREINAIGAGGYGTVYRGKLPDGQLIAIKRSKQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEKGERMLVYEFIPNGTLSEALYGIKGVQLDWSRRLKIALDSARGLAYLHDHADPPIIHRDVKSTNILLDERMTAKVADFGLSLLVSDSEEGQFCTNVKGTLGYLDPEYYMTQQLTAKSDVYSFGVVLLELIVAQPPIHKQKYIVREVKTALDMGDQTYCGLKDVMDPVLQKTGDLRGFARFLKLALQCVEDLGTDRPSMNTIVREIEVIMQDNGIRTGMSSTSSSFSIDSRTMMAAPKYPYSNASTSSTAFDMDSRAFEYSGKFPSEGSLKNRGT</aaseq>

Gene Sequence

<dnaseqindica>1..88#749..875#1006..1077#1240..1314#1451..1522#1638..1799#1887..1961#2041..2112#2201..2269#2357..2425#2516..2590#2683..2754#2829..2960#3104..3522#3603..3734#3825..3964#4071..4290#4462..4697#4893..5417#ATGGTGAAGAGGCGGCTGTTCTTGCTGCTGTTCTTGTGCTTGTTGGCTGGGTCAAGAATCGCTTCCGCTGACACCAATCCGCAAGATGGTAAAGCTTGTTTTTCCTGGTTCTTGCAGTTCTTGCATGCAGATTAGTTTGATGAGGGTTTTTGCTTGTATTCGATGTCCCATTCCGACGATTCACCGTGAAAAATAAAGGTTCAATTCCGGAGGTCAAGTTGTTTTTAGGGGGAATTTTTAGCGTCTTATAAGCATATTTGGATTGGGAATTCAGTTTTAGTAGCTTTTGGTGTTCAGAAATCTTGGGTTGTATTCCCTCAAAAGAAAAAAAAAAATCTTGGGTTGTGATCTACTGTTCAATTTGTCTGGATTCTTTGGATTGGGTTTGGTGGAGATGGCCCCAAGAAAAGATAGTAGAGGGGAGAATTGCCTTCCTCTTCTTTTTTCCAAAGTTTCTTAGTTTCATATTTTTACAAAAACCAAAATAAAAATAAAGGAGTGGCCATTGACTCCCTTGCAATATGATATTGTTGGATATACGCATAGACATGATGCATCCCAATTTTTGCAGCCCCAGAATCAATGCTGATTGATTTTCTTTTACCAAATAGATTTTGTGGAGCTTTAATTCAGCAAGTAATAATAACTCACATTTCACTATGACTCTAATCTAGTTCTAATTTTAGCATCCGTGGCTTGGCCTAAAAGTTGGTTGACAAGTTGCTATCTCCCTCTTTCGCACTCGCAGCGGCTGCGCTAAGATCTTTGATGAAGAAATGGACAAAAAATGTGCCTGCTAGCTGGAGGAAGTCCAATGATCCTTGTGCGAGATGGGATGGAATTACATGTGATAGGAACTCAAGGGTTACATCACTGTGAGTAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGAACAACACTATGAGTGGAGCTGATCCCATGATGTTAGTAGCTGTTCAACATCCTGAATTTGTTCTTTCTCACTCTATTGAATGCCACAGAAATTTATTCGGTATGAACTTGGAAGGGACTCTAAGTGATGATATCGGAAACCTGACTGAACTGACGGTCTTGTAAGTTCTACTGCTACCTTGATTACGTAGCCTTCTTTTGTAGCTTATAGTAGAGCTTTTGTAAGAATGTACATTCCAAACTAGGTTCAGTGTCATAAGATGCCTACGTCCTATGGTATTTCATGACGACACTGAATCACCAAATGATGAACTCCATCGCAGGGATTTATCCTCAAACAGAGGTCTTGGTGGTACTCTCACACCGGCTATTGGGAAGTTGGCTAACCTTAGAATTTTGTAAGTTGCAACAGTTCTCCATAACAGACGAGGCGGCGCTCTTACTATGAAATATACAATCTTCTGTTTGACTGTTTGCATCTACAATCCATAATTACTACTTACCATCTGATGTGTAAGTTGAACTATTGTGCAGAGCATTGATAGGTTGCAGTTTCAGTGGTAATGTTCCAAGTGAACTAGGGAACCTGTCACAACTCGATTTCCTGTAAGATCATTTGGGCTATCATTTGATATTTGACTGTTAAGCTTTTTTGTTCATCTGAAAAGGTTTTCTGTTATTCAATCTCAACGTAGTTCTTTTATTTGTTTCTTGTCCATAGCGGCCTGAACTCCAACCAATTCACGGGCAAGATTCCGCCATCATTGGGCAAGCTGTCCAAGGTTACTTGGCTAGACCTTGCTGATAACCAGTTGACCGGACCAATCCCAAACTCCAGGGACCATGGATCTGGGTTTGATCAGCTACTTAAGGCCCAACACTTGTGAGTGTCATAAGTAGCACAAGTACATTATTGAGCATATTTGTTATCTGATCATCATTCATCCCTTGTTCCACCTTCCTTTTGCAGCCATCTCAACAAAAATAAGCTGCAAGGTTCGGTCCCGGATTTTTTGTTCAACTCCAGCATGGATGTCAAGCATATGTAAGTTCCAAAGTCCAGGTATTGTCATATTAACTCTATACTTTGGAATGCAATATATGTGAAAGATTTTCGTGTCCAGACTTTTTGACAGGAACAACTTTAATGGATCTATTCCAGCGTCTATTGGGGTACTTCCAAAACTTGAAGTACTGTAAGTGCATTAACAGAACTTTATTTAGAATTGCTTTTCAGATTTTGGGGGTTTGTGTATGATTTTCTCCGCTCACTCTCTGAAACAGCCGTTTAAATGACAATGCTTTCACGGGTCCGGTTCCTGCAATGAATAACCTGACGAAGCTCCATGTTCTGTAAGTTGTGATGCAAACCATTGCGAAAATCAAATTGAGCTGGTCACTGTTGCGTCATTTATAACATTTTTCTTTGGAAATATCCAGAATGCTGTCAAACAACAAGTTAAGTGGACTGATGCCTAACTTGACTGGAATGGATATGCTCGAAAATGTGTAAGAACTTAATGCAAACTTAATAGCGTATTTTCAAATGATAATTTTATCTGTCACTATGATTGACAGGTGATATGGCTTTATTTGTAGGGATCTAAGCAACAACAGCTTTATACCTTCTGAAGTTCCAAGTTGGTTCACAAGTTTAATCAAATTAATGACCCTGTGAGTTGTAATGTGATATGAAATAATGAATGCACCAATTATGCAGTTTTAGATCAGTACATAATAATACTCTTTCCTTTTCCTTGTTGCAGCAAAATGCAGTCAGTAGGTCTTTCTGGGCAACTGCCGCAGAAGCTTTTCAGCAACCCCAACCTGCAATATGTGTAAGACAATATAACAATTGTAGCACATATACCATTAGTAAATCTAAAATACTGACTTGTTGAACATACTCCAGAGTATTGAGTGACAATCAATTGAATGGTGTACTTGACATGGGCAATATCAGCGATGAACTTCATGTCGATGTACGGAACAACAAAATTATCTCACTTGCAGTGTACAACAGCTTCACAGGAGAAACCCTTGAGTGCGTATCGTGCTTCCTTCCTTTTAGTAAACAGAACTACATGTTTCTTCGACCAATAATTATGAAATGGATTCAAGGAACTTTGTTTTGATTATTTAAATATTCTAACATTTTCTGAAGATTTGCTACTTCTCTGTTGCCAGGCTTGCAGGAAACCCAGTCTGTGGTGATTCACTTCTGTCAAGCATGAAGCCATGCACAGACCTGACAACTGAACCTCTACACAAGCCTCCTTCCATTGATGTTCAGTGTGCAAATCCATTTGTCGAAACCATCGTTTTTAGAGCTCCTTCTTTTGGAGATGTTGTTAAGTTCCTTCCTTCGCTGCAAGCCAACCTCTCAAGCAAACTAAACAGCTGCACCCCGAACAACCTAGGCCTGGTGTACTCGAATGATGATGCATACCTGAACGTGGATATCAGAGCATGCCCAGTAAACCAGAAGAGATTTAACTACTCCCAGGTGCTAAACTGCTTCAATCTAACCCTTCAGACTTACAAGCCACCAGAGATCTTTGGACCTTACTACGTGAAGGCACACCCTTATCCATTCCATGATAAAAGTGAGTGGTTCATCCCTTCAGTGACTTTTATGTGCAACCAAATGAAGATAGGTTCTTATGTGCGGCTGTCGATGTTGCAGCTTCTCGAGCTGTGTTGATTGGTGTTGTGACTGGATCCCTTCTCCTCGTTATTGGGCTCACACTTGTTGGAGTTTACGCTGTGCGGCAAAAGAAGCGGGCTCAGAAACTTGTTTCTATCAATGATCCTTTTGGTAATTTGTTGCACCTCATGGTCTCATTACTGATTGTCATCATCTCATGTTGCTTTACCTCCTTTCTGATCTTTTTATGAACTTTTTCAGCATCATGGGGATCAATGGGACAAGATATTGGTGAAGCACCGAAAATCAAGAGTGCTAGATGCTTCACACTGGAAGATCTCAAGTTGAGCACAAATGATTTCCGAGAGATTAACGCAATTGGGGCAGGAGGATATGGAACGGTAATTAAGCAAGCCCATCAATTGATGAACTGGAAGTATAGCATTTTTTCTTTTGCTTCCCATCTTTAGAATAGCTCCATAATCGTATTTGCATCTGATAAAACAGGTGTACCGAGGAAAGCTTCCTGATGGACAACTGATAGCCATCAAGAGGTCTAAGCAAGGGTCCATGCAGGGTGGGCTTGAGTTCAAGACAGAAATCGAGCTCCTTTCTAGAGTCCATCACAAGAACTTGGTTGGTCTTGTTGGTTTCTGCTTTGAGAAGGGAGAAAGGATGCTTGTTTACGAGTTCATACCGAATGGAACGCTAAGTGAGGCCTTGTATGGTAAGATTTCCCATATGATCTTATCAAGTCAATGTACAAGATACATGCCTTGTTGCTTAACCGCTCACCGCTGAAGCCAGCTGCCATAACTGTTCTTCCACAATTTCTACTAATCACATAAGATTTTCTCCCTTATATCAAATGAATTGATCAAAAAATTGGTCACTGTAGGTATAAAAGGAGTACAATTGGACTGGAGTAGGAGACTTAAGATAGCTCTGGATTCAGCTAGAGGGCTAGCGTACCTCCATGACCATGCCGATCCTCCAATCATTCACAGAGATGTGAAGTCCACCAACATCCTCTTGGATGAGAGGATGACCGCGAAGGTCGCAGATTTCGGTCTCTCCTTGTTGGTATCAGACAGTGAGGAAGGCCAGTTCTGCACCAACGTCAAGGGAACACTGGTAAGGCTGCATTTTGTGGCATAGAGAAGCTTCTTTAGCAACCATTGCACCTCATATAATCTTGAGAACAATTTAGATAATTTGTTTTTTTAACGACTCGCACCAGATAGTGCGAATTTCATATCGATATAGTAGGAAAAAAAATACAAGATTACAACCCTATCACTTTTTTTTACACACTTGCTATTGTTGCAGGGATACCTGGACCCGGAGTACTACATGACACAGCAGCTCACAGCGAAGAGCGATGTGTACAGCTTCGGGGTGGTTCTTCTAGAGCTCATAGTGGCGCAGCCACCCATACACAAGCAGAAGTACATCGTCCGGGAGGTGAAGACGGCACTGGACATGGGAGACCAAACGTACTGTGGCCTGAAGGATGTGATGGACCCGGTTCTTCAGAAAACAGGGGATCTCCGTGGTTTCGCAAGGTTCCTGAAGCTGGCATTGCAGTGTGTCGAAGATCTAGGAACCGACCGGCCATCGATGAACACCATAGTGAGGGAGATTGAGGTGATAATGCAGGACAACGGGATCAGAACTGGCATGTCATCGACGAGCTCTTCGTTCAGCATCGACTCGAGAACGATGATGGCCGCGCCAAAGTACCCATACTCCAACGCATCGACATCGTCGACGGCGTTTGATATGGATAGCAGGGCCTTTGAGTACAGTGGGAAGTTCCCTTCTGAAGGCAGCCTGAAGAACAGGGGGACGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019586