BGIOSGA019603

From RiceWiki
Revision as of 02:54, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019603| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019603, complete gene.| tag = OsI_194...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019603

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019603, complete gene.

LocusTag

OsI_19430

Ensembl Transcript ID

BGIOSGA019603-TA

Ensembl Protein ID

BGIOSGA019603-PA

Length

2987

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:15477734..15480720

Sequence Coding Region

15477734..15478993,15479340..15479438,15479531..15479723,15479997..15480376,15480458..15480511
,15480583..15480720

Genome Context

<gbrowseImage1> name=IndicaChromosome05:15477734..15480720 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:15477734..15480720 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCTCTAGAGTATTTATCTGTTAGATTTCACTTTGGCGGTGAATTCATTAACAATGGGAGGGAAACATTTTATGTTGGTGGATCTGAGGGTATGTCTTACATTGAACGTGACAAAATATCCTTGCCTGAGTTGATTGGGTATCTGAAAGATCACTGCGAAGTGCTCCCTGGTATGCTTTTGCACTGGCTTTTTCCTGGGAAAGAACTAGCAGATGGGCTGAGGGTGTTGGTTGATGATAAGGTCTGTGACTATATGTCAAAGTGTGTTGTGGATGGAGGAGTGGCTGAAATATATGTAGAGGCAGTAGTGGGAGGGGAGTCCAATGAGTCTGGTAGCAGTGATGACAGTGACTTTGAAGATGAATTGGAGGACATGTCTCTTGCTGATGATGAATGGGATGATTTAAATGATGATGCTGTGTTTGAATTACCTACTGGGAAGCCTATTCTTGTTATTCAGTCAACACCAGAGAAGACAAAAAGTGATTTAGATAGATTGAGAGCTTGGAGTACCCCAAGCCCAAAGGATAAGGGGAAAGCTGTGGTACTATGTGAAGAGAGGGTGAAGAGTGCAGACTTGTCTGGTTCTGACAATGATTACGTTGGTGGGGACTCTTGTTCATTAGGAGAAGATCAAGAGGTTGAGGAAATTAGGAAGGCATACAAGGAGTTTAAGAAGAAGCTAAAGGATGGTGAGGTAGGAAATTTAGATGATGTGATCTATATGGGGTCTTCAAGACAGATTAATGATGGAGCCTTGGTTCAGATTCAGGGTGAGGAAGATAATAGCCCATATGAGAACAGCAGTGCAGATGGTGATTCATATGAAGAGGATAGTGATGGACAGTTGGTCAGAAAGAAGTCCAAATACCCCATATTTAATGCCAACCAGCCCCATGTTAGGCTTGCTCTTGGGATGAAATTTGATGGGAAAAAAGAGTTTAAGGAGGCAGTGGTCCAGCTAGCCTTGCAGAACAAAAGATTCATAAGGTTCCCCAAAGATGAAGGTTACAGGACAAGGGCAAAGTGTGACTGGGCAACCTGTCCATGGAGTTGTTTGCTATCAAGGAACAGCAGGACAAATAGCTGGCAAATAGCAAGTCTTGTTGATGAGCACAATTGTCCTCCAAGGAAGGATAACAACCTGGTCACATACAAGAGAATTGCTCAGAAATATGAGAAGACGATCATAGATAACCCAACTTGGAGTATTCAGAGCATGCAGTCAACTGTCTCTGAGCAAATGTTTGCAAATGAAACAAATGACTCATGGGATTGGTTCTGTGATTTGCTATGCAAGGACTTGGGAGTTGGTGAAGGTGATGGCTGGGTGTTTATTTCAGACCAGCAGAAGGGAATTGTAAATGCAGTTCAGCACTGGGCTCCAAGTGCTGAGCACAGAAATTGTGCAAGGCATATTTATGCCAACTGGAAGAAGAAATTCAGCAAGAAGGAGTGGCAGAAGAAGTTTTGGAGGTGTGCCAAAGCTCCAAATGTCATGCTATTCAACCTAGCAAAGGCAAGACTGGCACAAGAGACTGTTGAAGGAAATTGTCATGCAATCTGCAATGGGATGGACAAGTTTGAAGTTAAGCATCAGAATCATAGGTTCACTGTTGATCTTGAGAGGAAAACTTGTTCATGCAGAATTTATTCCTTCAAAAAGACCTACAGCTGTTGTTTGGAACCTGTTGAGGGAATGGAAAGCTGGCCTACATCTGATAGGCCAAGGCCAAAGGCTCCAGGTTATGTTAGAATGCCAGGAAGGCCTTCCAAGAAGGAAATGAGAAGAGAGCTACATGAAAAGCCCAAAGCAACAAGGGTGTCAAGGGTAGGGTCAGTGATGACTTGCAGGTTGTGCAAACTCCCTGGGCACAACAAGGCTTCATGTCACAAGAGGAGACAGCAACAGCAGGGCAATGTGCAGGCTCAAGGATCTCAGCCAAGCTCTACACAGGATCAGGCACATGTTGCAGCCAAGGATATGGCAAAGGCTTCATCATCTCGAAAGAGGCAGTTGAAAGCTTCAACATCTGCAAGGGCAGCTGGAATGGTTGGGGTTGAGCAGCCAAGAAAGAAGTTGGAAGTTAGGAGATCTCCTCGGCTAAACAAAGGATGA</cdnaseq>

Protein Sequence

<aaseq>MDPLEYLSVRFHFGGEFINNGRETFYVGGSEGMSYIERDKISLPELIGYLKDHCEVLPGMLLHWLFPGKELADGLRVLVDDKVCDYMSKCVVDGGVAEIYVEAVVGGESNESGSSDDSDFEDELEDMSLADDEWDDLNDDAVFELPTGKPILVIQSTPEKTKSDLDRLRAWSTPSPKDKGKAVVLCEERVKSADLSGSDNDYVGGDSCSLGEDQEVEEIRKAYKEFKKKLKDGEVGNLDDVIYMGSSRQINDGALVQIQGEEDNSPYENSSADGDSYEEDSDGQLVRKKSKYPIFNANQPHVRLALGMKFDGKKEFKEAVVQLALQNKRFIRFPKDEGYRTRAKCDWATCPWSCLLSRNSRTNSWQIASLVDEHNCPPRKDNNLVTYKRIAQKYEKTIIDNPTWSIQSMQSTVSEQMFANETNDSWDWFCDLLCKDLGVGEGDGWVFISDQQKGIVNAVQHWAPSAEHRNCARHIYANWKKKFSKKEWQKKFWRCAKAPNVMLFNLAKARLAQETVEGNCHAICNGMDKFEVKHQNHRFTVDLERKTCSCRIYSFKKTYSCCLEPVEGMESWPTSDRPRPKAPGYVRMPGRPSKKEMRRELHEKPKATRVSRVGSVMTCRLCKLPGHNKASCHKRRQQQQGNVQAQGSQPSSTQDQAHVAAKDMAKASSSRKRQLKASTSARAAGMVGVEQPRKKLEVRRSPRLNKG</aaseq>

Gene Sequence

<dnaseqindica>1..1260#1607..1705#1798..1990#2264..2643#2725..2778#2850..2987#ATGGATCCTCTAGAGTATTTATCTGTTAGATTTCACTTTGGCGGTGAATTCATTAACAATGGGAGGGAAACATTTTATGTTGGTGGATCTGAGGGTATGTCTTACATTGAACGTGACAAAATATCCTTGCCTGAGTTGATTGGGTATCTGAAAGATCACTGCGAAGTGCTCCCTGGTATGCTTTTGCACTGGCTTTTTCCTGGGAAAGAACTAGCAGATGGGCTGAGGGTGTTGGTTGATGATAAGGTCTGTGACTATATGTCAAAGTGTGTTGTGGATGGAGGAGTGGCTGAAATATATGTAGAGGCAGTAGTGGGAGGGGAGTCCAATGAGTCTGGTAGCAGTGATGACAGTGACTTTGAAGATGAATTGGAGGACATGTCTCTTGCTGATGATGAATGGGATGATTTAAATGATGATGCTGTGTTTGAATTACCTACTGGGAAGCCTATTCTTGTTATTCAGTCAACACCAGAGAAGACAAAAAGTGATTTAGATAGATTGAGAGCTTGGAGTACCCCAAGCCCAAAGGATAAGGGGAAAGCTGTGGTACTATGTGAAGAGAGGGTGAAGAGTGCAGACTTGTCTGGTTCTGACAATGATTACGTTGGTGGGGACTCTTGTTCATTAGGAGAAGATCAAGAGGTTGAGGAAATTAGGAAGGCATACAAGGAGTTTAAGAAGAAGCTAAAGGATGGTGAGGTAGGAAATTTAGATGATGTGATCTATATGGGGTCTTCAAGACAGATTAATGATGGAGCCTTGGTTCAGATTCAGGGTGAGGAAGATAATAGCCCATATGAGAACAGCAGTGCAGATGGTGATTCATATGAAGAGGATAGTGATGGACAGTTGGTCAGAAAGAAGTCCAAATACCCCATATTTAATGCCAACCAGCCCCATGTTAGGCTTGCTCTTGGGATGAAATTTGATGGGAAAAAAGAGTTTAAGGAGGCAGTGGTCCAGCTAGCCTTGCAGAACAAAAGATTCATAAGGTTCCCCAAAGATGAAGGTTACAGGACAAGGGCAAAGTGTGACTGGGCAACCTGTCCATGGAGTTGTTTGCTATCAAGGAACAGCAGGACAAATAGCTGGCAAATAGCAAGTCTTGTTGATGAGCACAATTGTCCTCCAAGGAAGGATAACAACCTGGTCACATACAAGAGAATTGCTCAGAAATATGAGAAGACGATCATAGATAACCCAACTTGGAGTATTCAGAGCATGCAGTCAACTGTCTCTGAGCAAATGTTTGCAAATGTCAGTGCATCTTAGTGCAAGAGAGCAAAAGCATATGTCCTGAAGAAGATATATGAGTCTAGAAGGGATGAATACTCCAGAATTTTTGATTATCAATTGGAATTGTTGAGGAGTAATCCTGGGAGTATAGTTGTTGTCAAGCTTGATACTGACCAGCCAAGCCCAGTGTTCAAGGATATATGTTTGCCTAGCTGCTTGTAAGAATGGGTTCCTATTGGGATGTAGAAAGGTTGTTGGTTTGGATGGCTGCTTTTTCAAAGGTTCAAACAATGGGGAGCTATTATGTGCTGTTGGCAGAGATGCCAACAACTCTATGTACCCAATTGCATGGGCTGTGGTATAAAAGGAAACAAATGACTCATGGGATTGGTTCTGTGATTTGCTATGCAAGGACTTGGGAGTTGGTGAAGGTGATGGCTGGGTGTTTATTTCAGACCAGCAGAAGGTATACTCTTCTAACATATTTTGTTCAGTGTTATTTACTGTGTTTCTTGATGTGTTGTTGTTATTAAATGGCTTCTATGTGGTTGATTGCAGGGAATTGTAAATGCAGTTCAGCACTGGGCTCCAAGTGCTGAGCACAGAAATTGTGCAAGGCATATTTATGCCAACTGGAAGAAGAAATTCAGCAAGAAGGAGTGGCAGAAGAAGTTTTGGAGGTGTGCCAAAGCTCCAAATGTCATGCTATTCAACCTAGCAAAGGCAAGACTGGCACAAGAGACTGTTGAAGGTGCAAGGGCTATCATGAACACAGATCCTAGCCACTAGAGCAGGGCTTGGTTCAGGTTTGGCTCAAACTATGATTCTGTAGACAATAATATTTGTGAGACTTTCAACAAGTGGATAGTTCAGGCTAGGTTCCTACCCATTATTAGCATGTTGGAAGCTATTAGAAGGAAGGTGATGGTTAGGATACATGAGAAAATAACCTTGATGGACAAGTGGCTAGGATCAATTTGTCCAAACATACATAAGAAACTTAATGCATACATCATCGATTCAGGAAATTGTCATGCAATCTGCAATGGGATGGACAAGTTTGAAGTTAAGCATCAGAATCATAGGTTCACTGTTGATCTTGAGAGGAAAACTTGTTCATGCAGAATTTATTCCTTCAAAAAGACCTACAGCTGTTGTTTGGAACCTGTTGAGGGAATGGAAAGCTGGCCTACATCTGATAGGCCAAGGCCAAAGGCTCCAGGTTATGTTAGAATGCCAGGAAGGCCTTCCAAGAAGGAAATGAGAAGAGAGCTACATGAAAAGCCCAAAGCAACAAGGGTGTCAAGGGTAGGGTCAGTGATGACTTGCAGGTTGTGCAAACTCCCTGGGCACAACAAGGCTTCATGTCACAAGAGGAGACAGCAACAGCAGGGCAATGTGCAGGTACTAACTTGTTCATGCAGATTTTGCTTAAATTTATTACTAGCACAGCATCATAACTGATATTTTCTCTCAACCTTACAGGCTCAAGGATCTCAGCCAAGCTCTACACAGGATCAGGCACATGTTGCAGCCAAGGTAATAATGGCTTGCTTCCTGTTTGCACTTGCTTCAGTCCTATGTCTAACTGCTACCACTTGCTGTTGCAGGATATGGCAAAGGCTTCATCATCTCGAAAGAGGCAGTTGAAAGCTTCAACATCTGCAAGGGCAGCTGGAATGGTTGGGGTTGAGCAGCCAAGAAAGAAGTTGGAAGTTAGGAGATCTCCTCGGCTAAACAAAGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019603