BGIOSGA019612

From RiceWiki
Revision as of 02:54, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019612| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019612, complete gene.| tag = OS05G03...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019612

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019612, complete gene.

LocusTag

OS05G0318100

Ensembl Transcript ID

BGIOSGA019612-TA

Ensembl Protein ID

BGIOSGA019612-PA

Length

4344

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:15696491..15700834

Sequence Coding Region

15696491..15697337,15697427..15697468,15699759..15700834

Genome Context

<gbrowseImage1> name=IndicaChromosome05:15696491..15700834 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:15696491..15700834 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGCTCGAGCTTGTCGCGCCGTGCCCTCCTCCTCTTCTTCTTGGAGGTAGCCGTCGCCATGGCGCTGCTTCTTCCGGGCGGTCACGCGCGAGTGTGCCCGCCGTGCGGCTCGACGGAGGTGCCGTACCCGCTGAGCACGGCGGACGGGTGCGGCGACCCGGAGTACAAGGTCCGGTGCGCGGCGGCGGCGGCGGGGGGCACGGCGCCCACGCTCCTGTTCGACGCGCTCAACGGCACGTCGTACCCGATCACCTCCATCTCCCCGGCGTCGCAGCGCCTGGTGGTGTCGCCGGCGCCGTTCGTGTCGCCGGGCGCGTGCGTGTCGGTGGGCGCGGCGGCGTCCCGCGGCGTGCAGCTGGACCCGTCGCGGCCGTTCAACGTCAGCTCGTCCAACACCGTCATGCTGCTCAACTGCACGGAGCTGCTGCTGCGGTCGCCGCTCAACTGCTCCTCCAACTCGCTCTGCCACGCCTACGCGGGCGCCGCGGGGTCGACGGCGTCGGCGTGCGCGCCGCTGCCGCTGTGCTGCACGTTCGTGGCGGGGGGCTCGTCGACGTCGTACCGCATCCGGCTGGGCCCGCAGTCGTGCAGCGCGTACCGGAGCTTCGTGGGGCTCGACCCGTCGCAGCCGCCGGCGACGTGGGGCAGCCGCCTCGGGCTGGAGCTGCAGTGGGCGACGCCGAGGGAGCCGCTGTGCCGCACGCAGGCCGACTGCGAGGACGGCGCCGCCGCCACCTGCGCCGACGACCCGTCGGCAACCGGAGGCGCGGGCACGGTCCGGCGCTGCCTGTGCGTGTCCGGGCTCGTCTGGAATCCCATCGCTGGCGCGTGCCAGCAGCAGAATCTCACGGATAGCGGATCCAACCATGCGCCTCTCATTGCTGGGATCGTGTGCGGCCTAGGCGGCGCGCTGCTGGTGGCGACTGCAGGACTGTTCGCTTATCGGCGGCAGCAGCGCATTCGGCTGGCCAAGGAGAAGCTGGCCAAGGAGCGCGAGGAGATCCTCAACGCGAACAACTCGAGCGGCCGCACCGCCAAGAACTTCTCCGGGCGAGAGCTGAGGCGCGCCACCGCCAACTTCTCCCGCGACAACCTGCTCGGCGCCGGCGGCTACGGCGAGGTGTACAGGGGCGTCCTCGCGGACGGCACCGTGGTGGCCGTCAAGTGCGCCAAGCTCGGCAACACCAAGTCCACGGAGCAGGTCCTGAACGAGGTGCGCGTGCTGTCGCAGGTGAACCACCGCAGTCTCGTCCGCCTGCTCGGCTGCTGCGTCGACCTGGAGCAGCCTCTGATGGTGTACGAGTTCATCCCCAACGGCACGCTGGCCGACCACCTGTACGGCCCCCTCAGCCACCCCCCGCTCCCGTGGCGGCGGCGGCTGGCCATCGCGCACCACACGGCGCAGGGCATCGCGTACCTGCACTTCTCCGCTGTTCCGCCCATCTACCACCGGGACATCAAGTCGAGCAACATACTCCTCGACGAGCGGATGGATGGCAAGGTATCCGACTTTGGGCTGTCCCGGCTGGCGGAGCAGGGGTTGAGCCACGTCTCGACGTGCGCGCAGGGGACGCTGGGTTACCTCGACCCGGAGTACTACCGGAACTACCAGCTCACCGACAAGAGCGACGTGTATAGCTTCGGTGTCGTGCTGTTGGAGCTTCTGACGTGCAAGCGCGCCATTGACTTTGGCCGTGGCGCCGACGATGTCAACTTGGCCGTGCACGTGCAACGGGCAGCAGAGGAGGAGCGCCTTATGGATGTCGTGGACCCGGTGTTGAAGGATAACGCCACACAGCTGCAATGCGACACCATCAAGGCTCTCGGGTTTCTTGCGTTAGGATGCCTCGAGGAACGCCGCCAAAACCGGCCATCCATGAAGGAGGTTGCAGAGGAGATCGAATACATTATGAATATCGAGGCCGGCAACGCTCATCTCAAGGAGCTGCACAGCTTATGA</cdnaseq>

Protein Sequence

<aaseq>MASSSLSRRALLLFFLEVAVAMALLLPGGHARVCPPCGSTEVPYPLSTADGCGDPEYKVRCAAAAAGGTAPTLLFDALNGTSYPITSISPASQRLVVSPAPFVSPGACVSVGAAASRGVQLDPSRPFNVSSSNTVMLLNCTELLLRSPLNCSSNSLCHAYAGAAGSTASACAPLPLCCTFVAGGSSTSYRIRLGPQSCSAYRSFVGLDPSQPPATWGSRLGLELQWATPREPLCRTQADCEDGAAATCADDPSATGGAGTVRRCLCVSGLVWNPIAGACQQQNLTDSGSNHAPLIAGIVCGLGGALLVATAGLFAYRRQQRIRLAKEKLAKEREEILNANNSSGRTAKNFSGRELRRATANFSRDNLLGAGGYGEVYRGVLADGTVVAVKCAKLGNTKSTEQVLNEVRVLSQVNHRSLVRLLGCCVDLEQPLMVYEFIPNGTLADHLYGPLSHPPLPWRRRLAIAHHTAQGIAYLHFSAVPPIYHRDIKSSNILLDERMDGKVSDFGLSRLAEQGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTCKRAIDFGRGADDVNLAVHVQRAAEEERLMDVVDPVLKDNATQLQCDTIKALGFLALGCLEERRQNRPSMKEVAEEIEYIMNIEAGNAHLKELHSL</aaseq>

Gene Sequence

<dnaseqindica>1..847#937..978#3269..4344#ATGGCGAGCTCGAGCTTGTCGCGCCGTGCCCTCCTCCTCTTCTTCTTGGAGGTAGCCGTCGCCATGGCGCTGCTTCTTCCGGGCGGTCACGCGCGAGTGTGCCCGCCGTGCGGCTCGACGGAGGTGCCGTACCCGCTGAGCACGGCGGACGGGTGCGGCGACCCGGAGTACAAGGTCCGGTGCGCGGCGGCGGCGGCGGGGGGCACGGCGCCCACGCTCCTGTTCGACGCGCTCAACGGCACGTCGTACCCGATCACCTCCATCTCCCCGGCGTCGCAGCGCCTGGTGGTGTCGCCGGCGCCGTTCGTGTCGCCGGGCGCGTGCGTGTCGGTGGGCGCGGCGGCGTCCCGCGGCGTGCAGCTGGACCCGTCGCGGCCGTTCAACGTCAGCTCGTCCAACACCGTCATGCTGCTCAACTGCACGGAGCTGCTGCTGCGGTCGCCGCTCAACTGCTCCTCCAACTCGCTCTGCCACGCCTACGCGGGCGCCGCGGGGTCGACGGCGTCGGCGTGCGCGCCGCTGCCGCTGTGCTGCACGTTCGTGGCGGGGGGCTCGTCGACGTCGTACCGCATCCGGCTGGGCCCGCAGTCGTGCAGCGCGTACCGGAGCTTCGTGGGGCTCGACCCGTCGCAGCCGCCGGCGACGTGGGGCAGCCGCCTCGGGCTGGAGCTGCAGTGGGCGACGCCGAGGGAGCCGCTGTGCCGCACGCAGGCCGACTGCGAGGACGGCGCCGCCGCCACCTGCGCCGACGACCCGTCGGCAACCGGAGGCGCGGGCACGGTCCGGCGCTGCCTGTGCGTGTCCGGGCTCGTCTGGAATCCCATCGCTGGCGCGTGCCAGCAGCAGAGTACGTTTAATTTTTTTGCTTCGACGGCTGACAGCTCGGCTGTGAGGCGCCTCTAATTTTTTTTTTTATGGCTGTTAATTTTGATGCAGATCTCACGGATAGCGGATCCAACCATGCGCCTCTCATTGCTGGTAATTATATTGCTTCCTTCCTTCAGCGCTAGCTAGCGTCTTAATTTCTTATTACTGTCATCCTGGGAAATTAATTAGGACCTCTGTTCTCGATCGGGATGCATGCTTGACGCCTACTATCTAGTTACGACTTCAATTTGCAAGGCGGGCGACTAGCCGCTTGCTTGGTTTTAACGGAGAGAGATCGAATTGTGGAGTCGTTATTCGTTGCTTTGGTGAAAACTCAGTGATTAAGTAGGCCGCTAATACCCTTTTGTTAGTTGTTACTGCGAGTAGTTACTCGCTCCGTGCACAAATATGAAAATTTCTCTTAGCATGGAGTAAAATTAAGAAGGAAAGAATGAGGTATGGATAGGGGTAGAAGTGTGGTCGTTGGGGATAAGACGAAAATAAATTTAAACGAGAGATAAATGATTGATGGGACACATATTATTTTAAAATCTTTACATTTGTGAATAAATTTTAATTGATTGGAATGTTTATAATACTGAATTTTTTAAAAAATATTTGGAATGCTTATATTTGTAGATAGAGGGGGTCGTAGTATTATAGTTATCTGATTATGAATAAGAAATAATCCAAGCATCGAATACATATCAGGAGCATGGTCAAGGCACTTAGTCATTTTTATTCGGTATACAATAAGTAATCCGGGCTGATAAAATAAAATTGAGGTCAATGATCTGGATTGAATATAAATGAGAGATCAACTGAAAGTAGGTTTACATCAGTATCATGCTGGGTCCCATACTCCCTTGCGCCAATGGTCAACTTGCGGCGGCTTACATCCGGAGAAAAGCATTGACCATACCAGAGCAAGTGTAAATCTACCTAACTCCATCCAGAGAGCTAGCATTGTCAGCTTTACAACACGGACGAACCAAGGAAGTTCAACGGTTGGAAATTTGGAATGAGTTGCTGCACGATTTAGCTCGCTTTGGAGTTTGTACGAATTCTCCACGCGAAACAATTTAACTCCTTCGTGGAGCCCAACCATTAAATGGATGTACCAAGATTTTTCTTTGAAAACAATACTTAATAAATAATTCATGGAGGCCACATCTTGGATAGTTTATATATGAAAATTGTCTATCCTGTCTCATGGTGCCACATCAACTTAATTAATTTTTTCTAGATTTGGGATAATCGATTGATCAAAGGTCCAAAACATATAAAATATATATCAAATCAAACCATGTTGCTAATCGCTACAATGAAAATCAACACACCACACAACTCATTTTAACCATTGTGAATTCGGTAGATGTAACCTTCTATCCCACGGTAACAGCAGCAACACACATGTAATTTTCATCTAGCTAGTTAAATATAGGGTGAATAGCTAATTTAGTCCCTTAAGTTTCACCGAAGATTTAATTTGGTCCTTCACGTTTTATTTTGTCCATATAGTTCCTCCAAATATTTGTTTTGGTTTGAAATCATCCTTGGGTCCACTTAATATGCCATATGGCTATTTCCAGTCAATATTCCTATTAGAAAATATCTTTTTTGCCCTTAATTCGTATACAACTATATACTAGAAAAGAGAAAGCCAATATAAATAAACAACATTACATATGTACTTCCCATTATTTCAATATGTGCACATGAAACTTAAGCAATTGCTATCGTATACACTTGCTAGTACATAATTTATTTTTATTTTACATAATATACTATGTATTATCTATAAAAAATTCAAGCATGTAATTTTTCTCTTATATATATATATATGTATATGTATATATATATATATATATGTATATGTATATATATATATATATGTATATGTATATGTATATATATATATATGTGTATATGTATATATATATATATATATGTGTATATGTATATATATATATATATATGTATATGTATATATATATATATATATGTATATATATATATATATATATATATATATATATATGATGAGGTGTATAAGTGTTATTTATGAAGAGAGTTGTTGGTTCAAGATAAGTTTGAACTAAAAGGAAAACTTAAAGGACTCATATATATATAGATAGATTGAAATAGAACTAAACTAAGCCTCTGATGAAACTTGGAGGACCATTTTGACTATTCACCCTTAAATATAGATATTTGATGTTTGTTGTTCCTTAAACATAAGCTAAGGAATTGAAGCATAAGGAATTGATTAACCAGTTAGTACTATTGGTCGACCGTTAATTAATAAGCACATCAGGCAGCAGCGTGGAATTTACTAACTAGTGAATTAAGAAGATAATGGATGTTTAATTCTTGCTATAAATACATGAATGCAATGCAGGGATCGTGTGCGGCCTAGGCGGCGCGCTGCTGGTGGCGACTGCAGGACTGTTCGCTTATCGGCGGCAGCAGCGCATTCGGCTGGCCAAGGAGAAGCTGGCCAAGGAGCGCGAGGAGATCCTCAACGCGAACAACTCGAGCGGCCGCACCGCCAAGAACTTCTCCGGGCGAGAGCTGAGGCGCGCCACCGCCAACTTCTCCCGCGACAACCTGCTCGGCGCCGGCGGCTACGGCGAGGTGTACAGGGGCGTCCTCGCGGACGGCACCGTGGTGGCCGTCAAGTGCGCCAAGCTCGGCAACACCAAGTCCACGGAGCAGGTCCTGAACGAGGTGCGCGTGCTGTCGCAGGTGAACCACCGCAGTCTCGTCCGCCTGCTCGGCTGCTGCGTCGACCTGGAGCAGCCTCTGATGGTGTACGAGTTCATCCCCAACGGCACGCTGGCCGACCACCTGTACGGCCCCCTCAGCCACCCCCCGCTCCCGTGGCGGCGGCGGCTGGCCATCGCGCACCACACGGCGCAGGGCATCGCGTACCTGCACTTCTCCGCTGTTCCGCCCATCTACCACCGGGACATCAAGTCGAGCAACATACTCCTCGACGAGCGGATGGATGGCAAGGTATCCGACTTTGGGCTGTCCCGGCTGGCGGAGCAGGGGTTGAGCCACGTCTCGACGTGCGCGCAGGGGACGCTGGGTTACCTCGACCCGGAGTACTACCGGAACTACCAGCTCACCGACAAGAGCGACGTGTATAGCTTCGGTGTCGTGCTGTTGGAGCTTCTGACGTGCAAGCGCGCCATTGACTTTGGCCGTGGCGCCGACGATGTCAACTTGGCCGTGCACGTGCAACGGGCAGCAGAGGAGGAGCGCCTTATGGATGTCGTGGACCCGGTGTTGAAGGATAACGCCACACAGCTGCAATGCGACACCATCAAGGCTCTCGGGTTTCTTGCGTTAGGATGCCTCGAGGAACGCCGCCAAAACCGGCCATCCATGAAGGAGGTTGCAGAGGAGATCGAATACATTATGAATATCGAGGCCGGCAACGCTCATCTCAAGGAGCTGCACAGCTTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019612