BGIOSGA019622

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Revision as of 02:54, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019622| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019622, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA019622

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019622, complete gene.

LocusTag

OSJNBB0109A13.10

Ensembl Transcript ID

BGIOSGA019622-TA

Ensembl Protein ID

BGIOSGA019622-PA

Length

2591

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:15893572..15896162

Sequence Coding Region

15893572..15893934,15894376..15894627,15894715..15894813,15894931..15895224,15895782..15896162

Genome Context

<gbrowseImage1> name=IndicaChromosome05:15893572..15896162 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:15893572..15896162 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCCCTCCCCACCACTCGCCGGGCTCTCCAAAGCCGCCGCCGCCGCCGCCGCCCGCCGCGCCGCCACGGTCGCCGCGCGCAGCCGCCGCCGCCTCCTCGTCCTCCCCGCTGTCGCCTCGCTGGTACCGGGGCCACCTCCTGCGCTCTGCCGTCGCGTCCGCCTCATGCCGCAGCTGGAGGGCCCGCGCGCTCCCCCGCCGCCGCACGGCAGGGGCTTCGCCGCGGCCGCCGCCGGTGGGGATGGGGCTACACTGGATGCTGGTGATTCGGAGCTGGTGGTGGTCTCCTTCTACAGGTTCGCCGACTTCCCCGACCACGCCGAGCTGCGGCGGCCGCTCAAGGAGCTCTGCGAGGAGTTGCGTGTTTCAGGTGGTATTATCCTTGCGCCGGAAGGGATCAATGGTAGTATATGTGGAACACCAGAAGCTGTGGAGAAAGTCTTGAACTTCATTCAATCAGACGACCGCTTGAAAGGGTTACGGATGATCCAGTCTCCTGTTACTCCGGAAGACGAGGCTATCCATCATGGACATACCAGTCAATCTCCTGTTGGTGCTGGGGAAGATGCACCCTTCCGGTGGGATCATGTCCGTGTGAAATTGAAAAAGGAGATAGTCGCACTTGGAGATCCCGGTGTCATGCCAACTAAAACAGTTGGAAAATATGTTAAGCCAAAAGACTGGAATGCATTGATAAGTGACCCAGATACTGTTGTTATTGATGTGCGCAACATGTATGAGATACGCATAGGAAAATTTAAGAGAGCTGTTGATCCATGTACGAACTCATTCAGAGAGTTCCCATCTTGGGTTGATGATCAGTTTCAATTGGCTGAATCTGACAGTCAACTGTGCTCAGAAAATAATGACAATACAATTGGCAGACAGTCTGAAGATGTGAATTCAAGCAAACCCAAAGAGTTACCACGAGTTGCTATGTATTGCACTGGTGGCATAAGATGTGAAAAGGCATCAAGTTTCCTCCTTAGCAAGGGCTTTAAAGAGGTTTATCACTTGGAGGGTGGGATATTGAAGTACCTAGAGGAAATCCCCAAGGCAGAAAGCTTGTGGGAGGGTGAATGCTTTGTGTTTGACAAACGTGTCTCAGTGGAGCACGGATTAGCCCAAGGAACCCACAAACTTTGTTATGGATGTAAGAAACCAGTTAGTGATGAAGACATGGAATCTCCTGAGTGGGAGTATGGTGTATCATGTCCATATTGCTTTGCAACCAAATCCGAGGAGGAGAAGGAAAGGGCAAGGGCACGGCAGAGACAGTTTGAGACATGGGGAGTTATTGGCGGCCCTGATAAAGGAAGAAGTCCAAAAAGGCTGGAAGCTAATCACACAGCTGAAGAGCCCAAACAGTTGTCGAGCTCAGTCTAA</cdnaseq>

Protein Sequence

<aaseq>MLPSPPLAGLSKAAAAAAARRAATVAARSRRRLLVLPAVASLVPGPPPALCRRVRLMPQLEGPRAPPPPHGRGFAAAAAGGDGATLDAGDSELVVVSFYRFADFPDHAELRRPLKELCEELRVSGGIILAPEGINGSICGTPEAVEKVLNFIQSDDRLKGLRMIQSPVTPEDEAIHHGHTSQSPVGAGEDAPFRWDHVRVKLKKEIVALGDPGVMPTKTVGKYVKPKDWNALISDPDTVVIDVRNMYEIRIGKFKRAVDPCTNSFREFPSWVDDQFQLAESDSQLCSENNDNTIGRQSEDVNSSKPKELPRVAMYCTGGIRCEKASSFLLSKGFKEVYHLEGGILKYLEEIPKAESLWEGECFVFDKRVSVEHGLAQGTHKLCYGCKKPVSDEDMESPEWEYGVSCPYCFATKSEEEKERARARQRQFETWGVIGGPDKGRSPKRLEANHTAEEPKQLSSSV</aaseq>

Gene Sequence

<dnaseqindica>1..363#805..1056#1144..1242#1360..1653#2211..2591#ATGCTGCCCTCCCCACCACTCGCCGGGCTCTCCAAAGCCGCCGCCGCCGCCGCCGCCCGCCGCGCCGCCACGGTCGCCGCGCGCAGCCGCCGCCGCCTCCTCGTCCTCCCCGCTGTCGCCTCGCTGGTACCGGGGCCACCTCCTGCGCTCTGCCGTCGCGTCCGCCTCATGCCGCAGCTGGAGGGCCCGCGCGCTCCCCCGCCGCCGCACGGCAGGGGCTTCGCCGCGGCCGCCGCCGGTGGGGATGGGGCTACACTGGATGCTGGTGATTCGGAGCTGGTGGTGGTCTCCTTCTACAGGTTCGCCGACTTCCCCGACCACGCCGAGCTGCGGCGGCCGCTCAAGGAGCTCTGCGAGGAGTTGGTGAGCGCTTCATCATCCAGTTAGCCACGTATAAGGCTTAACAATCAATTCATCCAGTGTAGTGGATACACATTTATTATTGGATAAGCTTTAAAGCTTATGGAGGATGTGATACGGTTGCTTATTCTTTAGTTCATGCATTGCTTAGCAAATGACTGCTTATGGTGGATGTGAAATGATTGCTTATATTCTTTAATTCGTGGATTGCTTAGCAGATTTCGATTCATTCAGGTGCTAAGTTGCAATGCTATGTGTGGATGAACCGTTTTACTCGATGCTATTGTTGACTTGTCACAAATTTTCAACTTCCAAATTTGCTGTGCTTAGTGACAGTACTGAATGGTGCTGTTCACACCGTGATGGAGTTGACTAATGCGGTTTATGTATTGACTGTTTTGTGAAATCCAACTCTCACATGTTGGGCTGGCTGATGCTGTTCAGCGTGTTTCAGGTGGTATTATCCTTGCGCCGGAAGGGATCAATGGTAGTATATGTGGAACACCAGAAGCTGTGGAGAAAGTCTTGAACTTCATTCAATCAGACGACCGCTTGAAAGGGTTACGGATGATCCAGTCTCCTGTTACTCCGGAAGACGAGGCTATCCATCATGGACATACCAGTCAATCTCCTGTTGGTGCTGGGGAAGATGCACCCTTCCGGTGGGATCATGTCCGTGTGAAATTGAAAAAGGAGGTAAGTTGGTTTAGAATGCATGACAGTTACTGGATTTTTCAATTGTCTGATTATTCTGCTTATTCTGCTTTGTTGGCCATTTATCAGATAGTCGCACTTGGAGATCCCGGTGTCATGCCAACTAAAACAGTTGGAAAATATGTTAAGCCAAAAGACTGGAATGCATTGATAAGTGACCCAGATACTGTGAGTGTTTCACTCATTGCAGAGATTTATGTGTCCCACTCGTATGTGTTTAATTCAATTCCAGTAATGAATTTTGTTCCATGTCTGCATGGTTCATTTACATTATCCATGTGGCAGGTTGTTATTGATGTGCGCAACATGTATGAGATACGCATAGGAAAATTTAAGAGAGCTGTTGATCCATGTACGAACTCATTCAGAGAGTTCCCATCTTGGGTTGATGATCAGTTTCAATTGGCTGAATCTGACAGTCAACTGTGCTCAGAAAATAATGACAATACAATTGGCAGACAGTCTGAAGATGTGAATTCAAGCAAACCCAAAGAGTTACCACGAGTTGCTATGTATTGCACTGGTGGCATAAGATGTGAAAAGGCATCAAGTTTCCTCCTTAGCAAGGGCTTTAAAGAGGTAAATCATGAAGGCTTTTCTGTGTTATATTGTTCCGATTAATTCCATATCAAGATTTTTAGGAGTATCCCATTCTTTGAATTCATCAAATAAATAGATGTGTTATCATTTACTACATTCTTGAAAATCAATTTCCCCTCAGTTGACTCTTGCATTGAGTGCAGTTTCTTGTGATCAATGTCCTCACCACAATAGTATCATGTTATGGGGCTAGATATATAGTACAAAATTTTAGGTTTGGATATCAAATCAACAATGAAAATAATGTAAAATTCTTAAAGCGAGACACTTTGCCCTTGTGTGCATTAATTGTGCTTCATCACTAGATTCTCCCCTAGCTTAGGTCATAGTGAAAATATAGGTAATGTTAAAAAAGATTACCTTAATATGTGATAGATGTTTAATGCATCAAATTTTTGCTATCAACAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCCCACACACACACACTATGGTTTCTGAAATTGTCCTTGACATGGTTAATTGGTAATATATACTTAGTAGGTTTAATAAGCTGCTCATGTCAGGTTTATCACTTGGAGGGTGGGATATTGAAGTACCTAGAGGAAATCCCCAAGGCAGAAAGCTTGTGGGAGGGTGAATGCTTTGTGTTTGACAAACGTGTCTCAGTGGAGCACGGATTAGCCCAAGGAACCCACAAACTTTGTTATGGATGTAAGAAACCAGTTAGTGATGAAGACATGGAATCTCCTGAGTGGGAGTATGGTGTATCATGTCCATATTGCTTTGCAACCAAATCCGAGGAGGAGAAGGAAAGGGCAAGGGCACGGCAGAGACAGTTTGAGACATGGGGAGTTATTGGCGGCCCTGATAAAGGAAGAAGTCCAAAAAGGCTGGAAGCTAATCACACAGCTGAAGAGCCCAAACAGTTGTCGAGCTCAGTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019622