BGIOSGA019662

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Revision as of 02:55, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019662| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019662, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA019662

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019662, complete gene.

LocusTag

OSJNBA0077J17.8

Ensembl Transcript ID

BGIOSGA019662-TA

Ensembl Protein ID

BGIOSGA019662-PA

Length

3100

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17306901..17310000

Sequence Coding Region

17306901..17306997,17307994..17308078,17308198..17308347,17308424..17308577,17308834..17309049
,17309129..17309265,17309341..17309432,17309644..17309826,17309933..17310000

Genome Context

<gbrowseImage1> name=IndicaChromosome05:17306901..17310000 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:17306901..17310000 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGGACGATGAGGTCAGAGAGGAGAAGGAGCTCGACCTCTCCTCCTCCGACGTCGTCACCAAGTACAAGGACGCCGCCGATATCATCAACAATGCTCTTAAGTTGGTAGTGTCTTTGTGCAAGCCGAAAGCCAAGATTGTTGACATCTGTGAGAAGGGTGATTCTTACATAAGAGAGCAAACTGGCAACATCTACAAGAATGTGAAGAGGAAGATTGAAAGAGGTGTTGCTTTTCCAACATGTGTATCTGTGAACAACACAGTCTGCCATTTCTCTCCGCTAGCCACTGATGAGGCAGTCCTGGAGGAAAATGATATGGTCAAAATTGATATGGGATGTCATATTGATGGTTTTATTGCCGTGGTGGCTCATACACATGTTATCCATGATGGAGCAGTCACTGGGAAAGCAGCAGATGTTCTTGCTGCTGCCAACACAGCGGCAGAAGTTGCTCTGAGGCTTGTTAGACCTGGGAAGAAGAACAAGGATGTCACCGAAGCGATTCAGAAAGTTGCTGCTGCTTATGACTGCAAAATTGTGGAAGGAGTTCTCAGCCATCAGCTGAAACAGTTTGTCATTGACGGTAACAAAGTTGTACTTAGTGTGTCCAATGCTGATACGAAGGTGGATGATGCTGAATTTGAGGAAAATGAAGTGTATGCAATTGATATTGTCACCAGCACTGGAGAAGGGAAGCCCAAGTTATTGGATGAGAAGCAGACCACCATCTACAAGAGAGCTGTAGACAAGAATTATCACTTGAAGATGAAAGCATCTAGGTTCATTTTCAGTGAGATAAGCCAGAAGTTTCCTATCATGCCCTTCACTGCTAGGGCATTGGAAGAGAAGCGTGCACGCTTAGGTTTGGTGGAATGCATGAATCATGAATTATTGCAGCCGTACCCTGTCCTTCACGAGAAGCCAGGCGACCTTGTTGCACACATCAAGTTTACTGTGCTTCTGCTGCCATCTGGTTCACAGAGGGTAACATCGCATTCACTTCAGGAGTTGCAGCCCACTAAATCCATTGAAGACAACGCTGAGATCAAGGCATGGCTTGCTTTGGGGACAAAAACAAAGAAGAAAAGTGGTGGAAAAAAGAAGAAAGGTAAGAAAGGAGATGCAGCAGAAGCAGTGCCTATGGAAGAGGGTTCAAATGATGCAAACAAAGAATAA</cdnaseq>

Protein Sequence

<aaseq>MSSDDEVREEKELDLSSSDVVTKYKDAADIINNALKLVVSLCKPKAKIVDICEKGDSYIREQTGNIYKNVKRKIERGVAFPTCVSVNNTVCHFSPLATDEAVLEENDMVKIDMGCHIDGFIAVVAHTHVIHDGAVTGKAADVLAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAYDCKIVEGVLSHQLKQFVIDGNKVVLSVSNADTKVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPFTARALEEKRARLGLVECMNHELLQPYPVLHEKPGDLVAHIKFTVLLLPSGSQRVTSHSLQELQPTKSIEDNAEIKAWLALGTKTKKKSGGKKKKGKKGDAAEAVPMEEGSNDANKE</aaseq>

Gene Sequence

<dnaseqindica>1..97#1094..1178#1298..1447#1524..1677#1934..2149#2229..2365#2441..2532#2744..2926#3033..3100#ATGTCGTCGGACGATGAGGTCAGAGAGGAGAAGGAGCTCGACCTCTCCTCCTCCGACGTCGTCACCAAGTACAAGGACGCCGCCGATATCATCAACAGTAATAAACGCCTCTCGATTTTACCTTTGCTATTACTGTCGTGCTCGAGTTCATTATTGTCTGCTTTTTGCTGGGTAATGGCGGTGGTTTTGTTATCCGTAAGCACGCTAGGGAAGTTTATGCTCTGTGTTGTTAGCGTTACCTTGTCTTACTTAGGGAAGTTTATGCTCTGTGTTGTTAGCGTTACCTTGTCTTACTTGGGAAAGATTAGCTACGGGAGTTTAGCTGTTTTATTTATGGACTATGTTTTGGTAAGGGAAGAATTTCTGTGATGTAGACGATTTACACGGTTTGGATTCTAGTGTAAGTTTTAGCAGCTTCGTTGAAGAGTAATATGCTTTCTTTCTAGGTTAGTAGCATGCTCTTCTTCTGTATTGTCACTGGCTTTCTATTCAATGAGTGCAATATTATGTCTGAGTCTCTGCCTGTCGAGAAATCATGTGCATAGCCACAGAGCCACTCACTGGATTGCACAGGGATGTGCATTTGTGTTTAGCCTTGTGTTCTGATGTCTGGTGTTATCAGAATCACTAGTTCCTCCTCTACGTTCTCCCGTCCCTCACTCCGCTATTGTTGCTCTTACATGTATGAGGTGATTATTCTATGTTTTGTTGAGGGGAAAATGGTGCTCTGTTATCCAGGGTAGATTTGCCACAGGCTTTGTTTTGTTTTGTTAGCGTAGCCGTCTTTAGCTATTTAGTTGAGCCAAAAAGGTTGTTTTTTGCTAAGATATTTGTTTTTGCCCAGTTTGCAAGTCTGATATGTGATGTTCGTAGTTAGGTAGTATCAACTCAATATAAGTTTCAGATATCACAAGTTGAGAGGAGTTGTAAGTAATATGTGTTAAGATAGTTCCCTTCTTTCTTTTGTCCATTCAATTATGCTGGCACAGTGCCAATATCATTTTGTTCTGCGATTGTGCCTGAATGCCAAATATGTTGTCTTCTATGGTGATACTAGAATTGTAGTGCTAAATTGATTTTTATTGGTGAACAGATGCTCTTAAGTTGGTAGTGTCTTTGTGCAAGCCGAAAGCCAAGATTGTTGACATCTGTGAGAAGGGTGATTCTTACATAAGAGAGTAATGCATCTAACTTTGTCTTAATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTTACTGATTACTTATTTTTTTTCTTTATTGATATCAGGCAAACTGGCAACATCTACAAGAATGTGAAGAGGAAGATTGAAAGAGGTGTTGCTTTTCCAACATGTGTATCTGTGAACAACACAGTCTGCCATTTCTCTCCGCTAGCCACTGATGAGGCAGTCCTGGAGGAAAATGATATGGTCAAAATGTATTGTGCTGTTCTGACCTTTTCAACTTGTTCTTAGTCTACTTTGAGCCTTAATGATTCTATTTTCATTTGACAGTGATATGGGATGTCATATTGATGGTTTTATTGCCGTGGTGGCTCATACACATGTTATCCATGATGGAGCAGTCACTGGGAAAGCAGCAGATGTTCTTGCTGCTGCCAACACAGCGGCAGAAGTTGCTCTGAGGCTTGTTAGACCTGGGAAGAAGGTGCATTGAAAAGCGTTGCTTTATTTACTTGCTCTCTTTTTGCAATTTATGCTGTTCACATTTAGTGTCTAGGTCAACTGTGCACACAAATGTTGTGCTTGTTTCTCTTACTATGCTATTATGTTTTGCTAGACACACAAAAACTGTTTGGTAGTGAGCTAACCTGTATGTCTTCTCTGCAATGAATTAATTCAGTTGCATGCCTTTGGTTTGTATTAGAATGCTGATCTTGCCAGTAACAATTTTTCTTTTGCAGAACAAGGATGTCACCGAAGCGATTCAGAAAGTTGCTGCTGCTTATGACTGCAAAATTGTGGAAGGAGTTCTCAGCCATCAGCTGAAACAGTTTGTCATTGACGGTAACAAAGTTGTACTTAGTGTGTCCAATGCTGATACGAAGGTGGATGATGCTGAATTTGAGGAAAATGAAGTGTATGCAATTGATATTGTCACCAGCACTGGAGAAGGGAAGGTGAGAATAGCTGCTTTTATTTGAAGGATTGTCTTCTGTTTGCTTTTTTTTTACATTTTTTTTTAATTACGACGCACAGCCCAAGTTATTGGATGAGAAGCAGACCACCATCTACAAGAGAGCTGTAGACAAGAATTATCACTTGAAGATGAAAGCATCTAGGTTCATTTTCAGTGAGATAAGCCAGAAGTTTCCTATCATGCCCTTCACTGCTAGGTTGCTACAATAACGCTTACTTCAGACGCGCCTTTTTGTTTACTATATTGTAACATGCATTTTGAATTGTCACAGGGCATTGGAAGAGAAGCGTGCACGCTTAGGTTTGGTGGAATGCATGAATCATGAATTATTGCAGCCGTACCCTGTCCTTCACGAGAAGCCAGGTACACATCATCGCTCTAGGTGTTGAATACTGTAGAATTTTGGCAATTGTTCTGCCTTGTTTTTATGAGATAAGCCTTGGGGCGAGTACAAATCTGTATCCTCCTTTTGAGATTATTTGTGTTTATTTGTACAAACCGCTTCTGTTGATTACTGCTACATGCCATATTTCTCGTTTCTAGTGGTTGTATTAATAGTTGGTTCTTTGTGCAGGCGACCTTGTTGCACACATCAAGTTTACTGTGCTTCTGCTGCCATCTGGTTCACAGAGGGTAACATCGCATTCACTTCAGGAGTTGCAGCCCACTAAATCCATTGAAGACAACGCTGAGATCAAGGCATGGCTTGCTTTGGGGACAAAAACAAAGAAGAAAAGTGGTGGAAAAAAGAAGAAAGGTTTGTCCTGTTCTTTGTAACACAATTTTACTGGTTTTTTTGTATTTAAGTTGCCTCACCTGGATGGAACCTTCAACTCACCTAACTACCATTTTGTCATCTACAGGTAAGAAAGGAGATGCAGCAGAAGCAGTGCCTATGGAAGAGGGTTCAAATGATGCAAACAAAGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019662