BGIOSGA019684

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Revision as of 02:55, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019684| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019684, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA019684

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019684, complete gene.

LocusTag

OSJNBA0036C12.16

Ensembl Transcript ID

BGIOSGA019684-TA

Ensembl Protein ID

BGIOSGA019684-PA

Length

4909

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17815206..17820114

Sequence Coding Region

17815206..17815353,17816038..17816719,17816812..17816896,17817556..17817697,17818200..17818384
,17818820..17818952,17819078..17819214,17819339..17819413,17819869..17819982
,17820073..17820114

Genome Context

<gbrowseImage1> name=IndicaChromosome05:17815206..17820114 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:17815206..17820114 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTGTTCAAAGACACAGACTCAGGAAGACTCTGAATTCAATCAATGCAATGAAGAGCGCTCCCTGTGCTTACACTCATTTTCTGACTTGTCACATGTTTCTGCAGCTACTTTTATGTATCTTTTGAAGGACTGCTACCTATATGGAACTGACAAAGCAACCCCAAAGTTCAAGATCCTTCAGCTGCAGGTTAAAAGGGTATTAAATAATGATCCTCAGCCAGGCCCATTCACGTATGTTGTTCAATGCATGTATATTGTGCCACTGCTGGGGAAAACCCATGCTGAAGGCTTCAGCCATATGTTGATCTCTTCTCTAAGGCATTTGAAATCTGTGGAATCTGTACAGAAAGATTTCTTAGATGCAAAGCATCTTGCTGCGCGACTTATTCTTGATATTGTTGCTTCTATTGTGCCCCATGAGGAACGCATACTGATAAAGCTTCTCGAGGCATATGATATCGAGTTGAGAGATATGGCTGATGCATTATATGGTTCAGAGTTGGGTGATGAAGATCTAGTGAAAGCAAAAGAACATCTCAAACAGTATGTACAATGCTTAATGGAATCAGAATCTTATGTGACCGCTGTGAACCTGATAACACGATTTTCTATTCAATGTTATGATGAGTCCTTTCTTACAAAACTGATTGAAAATAATCACTTGGAGGCAGCAGAGAAGTGGGCAGTTTTCATGGGGAATGAAATGATATGTTTGATCATCCAAACGTATCTGGATATAAAAATGCTAAAGAGGGCAAATGAGTTGGTAAAACAACATGACCTTACAGAAAAGTTCCCAGATGTTAACTATTTGTATAAAGAGAGTGTACTGAAGAAGCTGGCTGAGAAAGGGTGCTGGGATATTGCAGAGGTTCGGGCCAAGAAGGAAACAAAATTGATGGAATACCTGGTATACCTAGCTATGGAAGCTGGGTACATGGAGAAAGTTGAAGAACTTTGCCAAAGATACTCTCTTGAAGGCTATGTCAATTCTTTGGGTAATCATAAACACCAACGTTATTTATCATACATTAATATCTGTAGTCCTGCAGTTCCAGAGGAGATTTGTTGTGGGTCTGACTACTTAGATCTTAAAGAACTGATTTTGGAAGACATTATCTGGGTTGATGAGATTGATGGACTTCTTAATTCAATAAGTTATATTGAAGCTTGTAAAATTATTGGTGTGGATTGTGAATGGAAGCCTAATTTTGAGAAAGGTAGCAAACCTAATAAGGTCTCTATTATCCAAATTGCGTCAGATAAGAAAGCTTTTATTTTTGATCTGATCAAGCTGTATGAAGATGACCCAAAAGTGTTGGATAGCTGCTTCAGGCGAATTATGTGTTCTTCAAACATACTAAAGCTAGGATATAATCTGCAATGTGATCTGCATCAACTATCACAATCATATGGAGAATTGAAATGTTTCCAGTCCTATGAAATGCTGCTTGATATCCAGAAGCTCTTCAAAGGGACTACTGGTGGTCTATCTGGGCTGTCCAAGAAAATATTAGGAGCTGGTTTGAACAAGACGCGACGGAATAGCAACTGGGAACAGCGCCCTCTCACCCAGAATCAGAAAGAGTATGCTGCCCTTGATGCTGTGGTCCTTGTTCATATATTCCATCACGTCAAGGGACAGCCTCAGTTTGGTGTCACCGAGGGATGCAAAGTGGAATGGAAGTCCCATATTGTTTCTCGGGTGAAGAATTCACGGAGTACATTACGCTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MGCSKTQTQEDSEFNQCNEERSLCLHSFSDLSHVSAATFMYLLKDCYLYGTDKATPKFKILQLQVKRVLNNDPQPGPFTYVVQCMYIVPLLGKTHAEGFSHMLISSLRHLKSVESVQKDFLDAKHLAARLILDIVASIVPHEERILIKLLEAYDIELRDMADALYGSELGDEDLVKAKEHLKQYVQCLMESESYVTAVNLITRFSIQCYDESFLTKLIENNHLEAAEKWAVFMGNEMICLIIQTYLDIKMLKRANELVKQHDLTEKFPDVNYLYKESVLKKLAEKGCWDIAEVRAKKETKLMEYLVYLAMEAGYMEKVEELCQRYSLEGYVNSLGNHKHQRYLSYINICSPAVPEEICCGSDYLDLKELILEDIIWVDEIDGLLNSISYIEACKIIGVDCEWKPNFEKGSKPNKVSIIQIASDKKAFIFDLIKLYEDDPKVLDSCFRRIMCSSNILKLGYNLQCDLHQLSQSYGELKCFQSYEMLLDIQKLFKGTTGGLSGLSKKILGAGLNKTRRNSNWEQRPLTQNQKEYAALDAVVLVHIFHHVKGQPQFGVTEGCKVEWKSHIVSRVKNSRSTLRF</aaseq>

Gene Sequence

<dnaseqindica>1..148#833..1514#1607..1691#2351..2492#2995..3179#3615..3747#3873..4009#4134..4208#4664..4777#4868..4909#ATGGGTTGTTCAAAGACACAGACTCAGGAAGACTCTGAATTCAATCAATGCAATGAAGAGCGCTCCCTGTGCTTACACTCATTTTCTGACTTGTCACATGTTTCTGCAGCTACTTTTATGTATCTTTTGAAGGACTGCTACCTATATGGTATACCTAGTTCTTTTTCATGCTATTCGAAAACTACTCCTTCCGTTTCATAATAACTGATACTCATATTTTTTGTTGAATATTTACAAACCTAGAAATGATACCATGTTACTAAAGTGGGGTTTGCCCTAAATCAAAACTTTCGTTCACTTTGGTCTAACAATTTAAGGGCAATTAATTGTCAAAGTTTAATTGGGAAAGTCAAAATTGTCAGTTATTAAGAAAGAGGTAGTATCATCTATGTGGCACTGTTATAATTTAATATCTACATGATTGGTGTGCTAAAATATTTCTTTCTGTAAGCTTCGGTGCAACTAATTCTGCTTGATTATGATATGAAAATGCTGTCACACAATCTTCCCAGAAATAAACACGTGATAGGAAAATAAATAAAGTTACCTACATAGTAATAATTACAGGTTAAATCCATAGTAGTTTGTATGGAACCTTGGTTGAGGTAAATATCATCAAATATGATTTTCAAATTCGGTTAATGCAAAATGCAGGCTCTTGAATTCCTTGGGTCTTCAAACTTTTTGCATAACCAACTCTCTGCTATGAATTTGCTACAAGCTTGCTTTATTATTTTATTTTATTTGTTTTCGATATCAATTTCATCCTTGATCTTATGCACTTATTAATTGTCCATACTCTGATGTTTTACAATCTTTTTTGAAAAATCAGGAACTGACAAAGCAACCCCAAAGTTCAAGATCCTTCAGCTGCAGGTTAAAAGGGTATTAAATAATGATCCTCAGCCAGGCCCATTCACGTATGTTGTTCAATGCATGTATATTGTGCCACTGCTGGGGAAAACCCATGCTGAAGGCTTCAGCCATATGTTGATCTCTTCTCTAAGGCATTTGAAATCTGTGGAATCTGTACAGAAAGATTTCTTAGATGCAAAGCATCTTGCTGCGCGACTTATTCTTGATATTGTTGCTTCTATTGTGCCCCATGAGGAACGCATACTGATAAAGCTTCTCGAGGCATATGATATCGAGTTGAGAGATATGGCTGATGCATTATATGGTTCAGAGTTGGGTGATGAAGATCTAGTGAAAGCAAAAGAACATCTCAAACAGTATGTACAATGCTTAATGGAATCAGAATCTTATGTGACCGCTGTGAACCTGATAACACGATTTTCTATTCAATGTTATGATGAGTCCTTTCTTACAAAACTGATTGAAAATAATCACTTGGAGGCAGCAGAGAAGTGGGCAGTTTTCATGGGGAATGAAATGATATGTTTGATCATCCAAACGTATCTGGATATAAAAATGCTAAAGAGGGCAAATGAGTTGGTAAAACAACATGACCTTACAGAAAAGTTCCCAGATGTTAACTATTTGTATAAAGAGAGGTAACTTTTGTTTTGCTCAATGCAAATTGCAAAATATTTCTACTATAATGTTTACTAATCTTATAGATCTCTGAATTATATTGTATTTGCAGTGTACTGAAGAAGCTGGCTGAGAAAGGGTGCTGGGATATTGCAGAGGTTCGGGCCAAGAAGGAAACAAAATTGATGGAATACCTGGTAATATGCATCCACATTGTCAGAGTCATCTTTTAGACATGTTTGTTGTTTGTACATGTCATCATGAAAGTATCTGCTGCAATGGAAGATGGATTCACTCGAGACACAGTTTCCTATATGCCTCTATCTTTGTTCATCGGATGAAATGGCTAGGATGTATTGCTTTTGTTACATGTGGATTGATGGTCGTTATTGTGAAGCCATGCTGTCATCTATTTCATAGTGTTCATATTTATTTATTTTTTGCTGGCATCCTTGTGTATAAAATCTATATATCCTATATAGTTGGCACCAAAAGCTTAACATGCATTGAGCCACATAACTGACAAAATAAGAGCCATTGGATTATTCCCATGCTTCATCACAATCATCCAAGATATATTAAAATAGTTACATTTACTTCTCATTAGTTCCTAGATAACTTAATATTGATTATCCCACATAGTGTAGTTATTATTGCTTAAAGAAGGCAGGTCATGCCATTTGTCATCTTATCATCAGATGGTGCTTTTACGGTTCATATCAACTAACAATCTCTCTCATATTAATATATAGACTTTTTATAATCGTATTGCACACACCATTATCCCGCCGCAACGCGCGGGTTGCCATCTAGTAAAATATAATTGCTTTACTCATGACTTTGTTACCTTGTGCAGGTATACCTAGCTATGGAAGCTGGGTACATGGAGAAAGTTGAAGAACTTTGCCAAAGATACTCTCTTGAAGGCTATGTCAATTCTTTGGGTAATCATAAACACCAACGTTATTTATCATACATTAATATCTGTAGTCCTGCAGGTGTGTATTCTTTTAATTTTCTAGCTATTTATTTTCAACCTGCTGTAGAAACTATCTCCTTTACGTTTGCATTAACTTTTAAATAGCCACCCTGCTGACATTCCTTTTGGTTATTACAACCCACTAGAATGATTAAGTTGATTACTTTCAGCTGGAACTTTGAAATCTGGGTTGCTGATATAGAATTACTAGAAAAACATTATAATGGAAAGGTTTACTACATGCATCCGACGTTCCAAATTTAACTTACATAGGAAGAGCTGTAATTAGGAACAAGGTATTTTAAAGACTAACATTTTTACCAATGCAAAAATCATGGACGCGTGAGAGGGAGGGAGGGAGGGAGAATGCAGGATGGGTTAATGCAAAATTATGATATATGAAACACAGCTTTATGATACATTCATTGAATTTTATCTGTACTCTTGATACGTTGTAATTGACTTTATCCCATCAACTCCATTTCTACTGTTGATCCCCTATATTAATTGTGTATGAGCAGTTCCAGAGGAGATTTGTTGTGGGTCTGACTACTTAGATCTTAAAGAACTGATTTTGGAAGACATTATCTGGGTTGATGAGATTGATGGACTTCTTAATTCAATAAGTTATATTGAAGCTTGTAAAATTATTGGTGTGGATTGTGAATGGAAGCCTAATTTTGAGAAAGGTAGCAAACCTAATAAGGTAAGCGATGTCTTAATTTAAATTTCTGTCAGTTTCCATGTTTAACTTAGTTTTCTGGTACAATTATAATCATTTTTCCTAATGTATGGTAATCATATGTTGCATTATTGTGGCGATACAGCAGGCTGAATGAAAATCTCCCCCTGTTCTTCCTCAAAAGGCATCACTGGATAAAATAGGATAAATAAATTGTATTAGGTATCATTTAAGCAATTTAGTAGTTCTAGTATTCAGTTATCCATATCACTCCCTGTGTAGTAAGCTATGGCCTTGTGATCATCTCAGTGATATTTTCTTTACAGTGTTTATTGTTTTGGAACGACTATCTTATCCTTAAGTTCCCATGATATTTTTTACTTGTTCCTCTTTCAGAAATTCTGCATTTTATCTATCTATGTCAGTTCTTGCATTAATTGAATTTTGCTCTATGGTTAGGTCTCTATTATCCAAATTGCGTCAGATAAGAAAGCTTTTATTTTTGATCTGATCAAGCTGTATGAAGATGACCCAAAAGTGTTGGATAGCTGCTTCAGGCGAATTATGTGTTCTTCAAACATACTAAAGCTAGGTAGCGTACTATTTTGATTAAAAAACCCATATCTTCCCATACACTCTTGTTTTCCTGAAAACAACATTTCTTTCTTATGCATCCTGTTAAACAAGTACTTATTTTTGCCCCATTGTAAACCAAAGGATATAATCTGCAATGTGATCTGCATCAACTATCACAATCATATGGAGAATTGAAATGTTTCCAGTCCTATGAAATGCTGCTTGATATCCAGAAGCTCTTCAAAGGGACTACTGGTGGTCTATCTGGGCTGTCCAAGGTAATTGCTATAGCGGTATAGGCTCCACTTAACTGGACGTTGAACCAGTTTTGATTTTTTTTAAGCTTATAGTTTAGTGTGAATCATCTGGTCCTCCATCTTTATTTATCACGGAATGTATCAGAAAATATTAGGAGCTGGTTTGAACAAGACGCGACGGAATAGCAACTGGGAACAGCGCCCTCTCACCCAGAATCAGGTCTGTCATCTTTCATATTCCTTAAAAGCTGTCCTCACGAGTCCTTATTCCTTGAAAGGCCCTATTTGTTGGTATGAGTGATTAATTAATTTCTCATAATTTTGTATTGTGAGTTTTTTTTTTCAGTCTCATTCTGAATTTATTTTCACAATACTTTTCTAACCATGACAGGTGTTTGTATGAAAAAAGTAGAAAAAGAAATTTACTTTAGAAATGAGCCTGTCGATTACCACATTTTTAACATCACCTTAAGATGCCTCTCCTTATTCTCATGTACAAGCAAATTTTCTATCAGATCTTGTGCTAAGCTTATCTTGGTAAACACCATTAGTTAAAACTAAGTCAAACATGCTTCATCTTGCAATCTAAAGCCACGAGTTAGTTTGATAGCCTACTGTTCATCGAGGACAAAAAGCGCCATCCCTAAAACAGAGAGATTCTTCCTCCTTTTGCAGAAAGAGTATGCTGCCCTTGATGCTGTGGTCCTTGTTCATATATTCCATCACGTCAAGGGACAGCCTCAGTTTGGTGTCACCGAGGGATGCAAAGTGGAATGGAAGTCCCATATTGTAAGTGCAATCTAAAAACATCAAAGTATCAAACTGCCATGTTTATATGCTAATCCTGAACATCATGTGACATTTTAACCATCGTTGCAGGTTTCTCGGGTGAAGAATTCACGGAGTACATTACGCTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019684