BGIOSGA019688

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Revision as of 02:55, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019688| Description = cDNA, clone: J065021D19, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA019688, complete gene.| ...")
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Gene Name

BGIOSGA019688

Description

cDNA, clone: J065021D19, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA019688, complete gene.

LocusTag

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Ensembl Transcript ID

BGIOSGA019688-TA

Ensembl Protein ID

BGIOSGA019688-PA

Length

2482

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17869409..17871890

Sequence Coding Region

17869409..17869483,17869652..17869714,17869840..17870031,17870298..17870409,17870611..17870679
,17871157..17871219,17871581..17871661,17871757..17871890

Genome Context

<gbrowseImage1> name=IndicaChromosome05:17869409..17871890 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:17869409..17871890 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTCTCCTACGTCGCGGTGCTCTACGCCCCCACGGCCCTCCTCCGCCTCCCGCCCCCGACCTCCCTCCACGTGTGGAGCATCGGAGATTCGTCCGTCGTGCTCGCCGTGTTTGGCATTCGGAGAGATCACCTGCTTCAAGCGGTGGCGATTCCCCTCCTCCTTACATCGCTAGTGTACGCTGGCTCGTTCGTCGCGAGGCTCTGGCTGCTGGCGAATTCGTGCGGCGGAGGCTATGAAGAGCCGGAGATAGGCTGGGCACAGAGGCTTGCTCACCGGATCCGTGCCTCCGTAGGAGATGTGATGGTTTGGCGCAACTGCGTAGTGGCACCAATTACAGAGGAATTGGTTTTCCGGGCGTGCATGGTACCTCTTCTTCTATGTGGAGGATTCAAAATATATAACATTATATTTCTGAGTCCAGTCTTCTTCAGCCTAGCACACTTGAACCATTTATTCGAACTACATCAACAGGGACGCAATTTTACGAGATCACTCCTGATCGTTGGTGTCCAGTTAGGCTACACTGTAATTTTTGGGTGGTATGCAGTATTTTTGTTCACCCGAACAGGGAATATCGTCTCTCCTATTGTTGCCCACATATTTTGTAACATAATGGGTTTGCCAGTTTTCTCATCACCACAAAAAAGAGGAGTGGCATCAGTAGCATTTCTGGCTGGTTCATTGTCCTTCTTTTGGCTCCTTTTCCCTGCGACGAGCCCAAAACTATATAATTCTAGGATAGATCAGTGCAGTTGTTGGCATGGATATTGCAGATGGAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MAVSYVAVLYAPTALLRLPPPTSLHVWSIGDSSVVLAVFGIRRDHLLQAVAIPLLLTSLVYAGSFVARLWLLANSCGGGYEEPEIGWAQRLAHRIRASVGDVMVWRNCVVAPITEELVFRACMVPLLLCGGFKIYNIIFLSPVFFSLAHLNHLFELHQQGRNFTRSLLIVGVQLGYTVIFGWYAVFLFTRTGNIVSPIVAHIFCNIMGLPVFSSPQKRGVASVAFLAGSLSFFWLLFPATSPKLYNSRIDQCSCWHGYCRWS</aaseq>

Gene Sequence

<dnaseqindica>1..75#244..306#432..623#890..1001#1203..1271#1749..1811#2173..2253#2349..2482#ATGGCCGTCTCCTACGTCGCGGTGCTCTACGCCCCCACGGCCCTCCTCCGCCTCCCGCCCCCGACCTCCCTCCACGTCTTCCTCCACCGCGCTTCCTCTGCGCCGCACATTCTCCTCCTCGTGCTCCCTCCTCGCCACCGCCTCCCTCCTCCGCGTAAGTGCCCCCCACCTTGTCCCCTCCGAACCCTAAACCCTAAACGGAATCTCATGTCCCTAGCGTCTTCTCCTCCCCATCCTTCCTAGGTGTGGAGCATCGGAGATTCGTCCGTCGTGCTCGCCGTGTTTGGCATTCGGAGAGATCACCTGGTGAGCCTAAGCGACCTCACTTACTGTTCTTGTTTTTTTTTTTTCCTTTCTGAACATGTCAGTAATACTAACAGGTTTGAGCTTGGTGATGCTTCAATTCTGAAATTGTTGGTGCTTGGCTGCAGCTTCAAGCGGTGGCGATTCCCCTCCTCCTTACATCGCTAGTGTACGCTGGCTCGTTCGTCGCGAGGCTCTGGCTGCTGGCGAATTCGTGCGGCGGAGGCTATGAAGAGCCGGAGATAGGCTGGGCACAGAGGCTTGCTCACCGGATCCGTGCCTCCGTAGGAGATGTGATGGTTTGGCGCAACTGCGTAGTGGTTTGTTCTCTCCTTCGCTTTGATGCATTTGCTTTGTCTTGTAAACCGGCGATGGAATGTTATGTGGTGTGGCGATGATCAAGGAATTTTTCAATTAATTGATATAGTACGATTGATCTGTAGGATGTTACCATCTAACAGTTCATGAAAAATTACCACTTATGCAAAACTTTTAGCTTTCTATGGCGCAAATGTTACTACTGAAACGATGGTTTCCTTTATATATTCTACTAGTGATTTTTATTTGAGTATGCTTGTTTGTTCAGGCACCAATTACAGAGGAATTGGTTTTCCGGGCGTGCATGGTACCTCTTCTTCTATGTGGAGGATTCAAAATATATAACATTATATTTCTGAGTCCAGTCTTCTTCAGCCTAGGTAAATAGCTTTTATATTGTACCAAAATTTCATTTCTAAGGGTCTGATCTGGTACTATTAACTTGTTTATACCCATGTTGTCTGTCCTTATCTAGTTGTTTCTATAGGAATTAAGAACTGCTGCGTAATACAACCCTTAAGATTTACCTATGTGTTGATGTTTTCTTCTGTTAATTTGTAACTGAGCCTTTCTATCAACAGCACACTTGAACCATTTATTCGAACTACATCAACAGGGACGCAATTTTACGAGATCACTCCTGATCGTTGGTATTTTCTTTCTTATTTTTTTAGTTCTATTCTTTACTGTAACGCCTTCCTTTTAATGATTTTTAGAGTAAAGTTGTTTGATCTATATTTAACTTACTTTATTTCTAATATGTGAAATTAAAGCGATTTTTTTTGTATCTTTGTTTATGAAGTTATTTCAACACCGTGTTGATTTGCAACCTATAGTGATGTAGCAACACCTTCATATCTAATCACAGTCATTGGTATTTAGCATATTAGTTTATCATCATCATTATATTGCACTGTTAACTTTTTAAAATAAAGTATTGACTTCGTACAACATCAACTACAGGTGTCAATATTTGTTAGTGGTTCCTTTGTATTCGTTCTTAAACTATAAACAAATGTTTGATCTTTCAATATATTCGTCATATTTTGTACATTATTTTTCTCAAAGTATATCACTTTTGCTTCATTTTGCTGGGCTTGCCTTAACTTTTTGCCTTTCATTCACAGGTGTCCAGTTAGGCTACACTGTAATTTTTGGGTGGTATGCAGTATTTTTGTTCACCCGAACAGGTTTTACTCTTTCTTTTGTGTGTTGCATGTGTACATTGTGCATTTGTTGTTTCCAGCTATGCATATTCTTGTTGCGGGAATTACTTCTCCAATTATTCAAATTAGTTTAGGTAGCTATATTTGAGAAGACATCTTTTTGTGAATGATTCTAGGATTTGCATAGTAAGTTCAATTGTTACCACTGATTATGAAGTATGTAACCTGTTTCTAGAAGAGCTGAACTTTAAAGCAAGGTCCTGAATACACCAGTCTCCTTTTCTTCATCCTTCCACTGCACTTACCTAATTCAATTGTTTGATTGAAGCTTTATATTGTTCTGACAACATGGTTGTTCAATCACTTCGTTCAAAAAATACTGCAGGGAATATCGTCTCTCCTATTGTTGCCCACATATTTTGTAACATAATGGGTTTGCCAGTTTTCTCATCACCACAAAAAAGAGGTGTGTACCTTGATTTATTTCGAGAAATCAAAAGCATGGTTGAGTCTTAAATATGCTACTTCTTACATTGGTTTACCTGGTGCTTTGTGTTCCAGGAGTGGCATCAGTAGCATTTCTGGCTGGTTCATTGTCCTTCTTTTGGCTCCTTTTCCCTGCGACGAGCCCAAAACTATATAATTCTAGGATAGATCAGTGCAGTTGTTGGCATGGATATTGCAGATGGAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019688