BGIOSGA019704

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Revision as of 02:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019704| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019704, complete gene.| tag = P0692D1...")
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Gene Name

BGIOSGA019704

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019704, complete gene.

LocusTag

P0692D12.11

Ensembl Transcript ID

BGIOSGA019704-TA

Ensembl Protein ID

BGIOSGA019704-PA

Length

6755

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18242469..18249223

Sequence Coding Region

18242469..18242562,18243036..18243107,18243187..18243243,18243326..18243379,18243463..18243530
,18243637..18243718,18244444..18244499,18244616..18244918,18245016..18245102
,18245476..18245650,18245728..18245849,18246385..18246548,18246634..18246888
,18247776..18247897,18248013..18248134,18248659..18248807,18248922..18249060
,18249188..18249223

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18242469..18249223 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18242469..18249223 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGAGGCTCCACCTCCGTGGAGGTCCGCCGCGACGGCGTCGCCGTCATCACCGTCTCCAACCCCCCCGTGAACGCGCTCTCCCTCGACGTGATAGCCAGCTTGCAGAGAGATTATGGGGAAGCTCTGAGGAGGAGTGATGTCAAGGCAATTGTTCTCACTGGCGCCAAAGGGAGGTTTTCTGGAGGCTTTGATATAAACGCATTCGACAAGAAGCCAAAAAATGAGAAGCCTGGATATCTGTCTATTGATTTTTTAACGGACATAGTAGAAGATGCTCCGAAACCATCAGTGGCTGCTATAGATGGCGTTGCTCTAGGTGGCGGCTTAGAGCTTGCAATGGTTTGTCACGCTCGTGTTTCTACATCTTCGGTTCAATTAGGATTACCTGAACTTCAACTGGGCATCATTCCTGGGTTGGGAGGAACACAACGACTGCCCCGCCTTGTTGGCCTGCCAAAAGCTCTTGAGATGTTGTTGATGTCTAAACCTCTAAAAGGAGTGGAGGCACATAAATTTGGTTTAGTTGACGCTGTAGTTTCAGCTGATGAATTGATCAGCACGGCCTGTTCCTGGGCTCTGGAAATTGTTGAAGACAAACGCCCATGGTTCAGGAGTCTCCATAGAACCGATAGACTTCCAGCTCTTGAGGAAACGAAGAAAATTCTGAATTTTGCAAGAGTTCAGGCCCAAAAGCAGTCTGCTAGTCTCCAACATCCCTTAGTTTGCATTGATGTCATTGAGGAGGGCATAATTTCTGGCCCTCGAGCTGGCCTAATGAAGGAAACACTTTGTGGAAAAATGCTTGAGATGTCTCAGATAAGCAAAAGCTTAAGGCATGTCTTTTTTGCACAACGTGCAACTTCAAAGATTCCAAATATCAGCAACTTGGGGTTGACACCACGGAGAATACACAAGGTGGCTATTGTTGGGGGAGGTCTAATGGGATCTGGAATAGCAACTGCATTGATATCGAACAACCTCCTGGTAATCCTGAAAGAAGTCAATGAGCAGTTCTTAGATGCTGGTATTAGCAGAGTTAAAGCTAATCTGCAGAGCTTAGTCAAAAGGGGGCAAATGACCAAAGAAGATTATGAAAATAAACTTTCTTTACTATCTGGTGTTCTTGACTATGAACAATTTAGAGAAGCTGATGTGGTCATTGAGGCAGTTATTGAGGATTTATCACTAAAGCAGAAAATATTTGCTGACCTTGAAAAATACTGCCACTCTAATTGCATACTTGCCACGAATACTTCAACAATAGACCTTCATTTAATTGGCCAAAAGACATCTTGCCAGGATCGAATTGCTGGTGCACACTTCTTCAGTCCAGCCCATGCAATGCCACTGTTGGAAATAATCCGTACTCATCGGACTTCCTCACAAGTTGTCATTGACTTGCTAAACGTGGCAAAACAGATACGAAAAACACCAATAGTTGTTGGGAACTGCACAGGTTTTGCTGTGAATCGGATGTTCTTTCCTTTCACACAGGTGGCTTATTTTCTTGTTGATTATGGTCTGGATGTCTACCACATAGACCATGTGATTACAAAGTTTGGAATGCCAATGGGACCTTTCCGATTAGCTGATCTTGTTGGTTTTGGAGTTGCTATTGCCTCCAGAAAGCAATATCTCCAAAGTTATCCTGAGCGATGTTACAAGTCAATGCTTATTCAAATTATGCTTGAGGAAAACAGGACAGGTGAATCTTCACGCAAAGGATTTTATCTTTATGATGATAAGCGAAAGGCTTCTCCAGATCCTGAAATGAACAAGTACATTGAGAAATCAAGAAGCATGGCTAGTATTGTACAAGATCCTAAGCTGCCGAAATTAACAGATGATGAAATCGTGGAGATGATGCTCTTCCCCGTGGTGAATGAGGCCTGTCGACTGCTTGACGAGGGGGTTGCTATGAAAGCATCTGATCTTGATGTAGCATCCATTATGGGGAGGGGCTTCCCTTCCTACAGGGGCGGAGTGATGTTCTGGGCCGATTCGTTTGGCGCGAAATACATTTACGACAGACTGAAGGATTGGTCCAAGTTTCACGGAGGGATCTTTGAACCCTATGAATATTTATCAACAAGAGCTCGTCAGGGTTTGTCTCTGGCCGCCATGGCTGATGGTGCAATGTCACGGCTCTAG</cdnaseq>

Protein Sequence

<aaseq>MARGSTSVEVRRDGVAVITVSNPPVNALSLDVIASLQRDYGEALRRSDVKAIVLTGAKGRFSGGFDINAFDKKPKNEKPGYLSIDFLTDIVEDAPKPSVAAIDGVALGGGLELAMVCHARVSTSSVQLGLPELQLGIIPGLGGTQRLPRLVGLPKALEMLLMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALEETKKILNFARVQAQKQSASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKSLRHVFFAQRATSKIPNISNLGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNEQFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSLKQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRTHRTSSQVVIDLLNVAKQIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHVITKFGMPMGPFRLADLVGFGVAIASRKQYLQSYPERCYKSMLIQIMLEENRTGESSRKGFYLYDDKRKASPDPEMNKYIEKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDEGVAMKASDLDVASIMGRGFPSYRGGVMFWADSFGAKYIYDRLKDWSKFHGGIFEPYEYLSTRARQGLSLAAMADGAMSRL</aaseq>

Gene Sequence

<dnaseqindica>1..94#568..639#719..775#858..911#995..1062#1169..1250#1976..2031#2148..2450#2548..2634#3008..3182#3260..3381#3917..4080#4166..4420#5308..5429#5545..5666#6191..6339#6454..6592#6720..6755#ATGGCGAGAGGCTCCACCTCCGTGGAGGTCCGCCGCGACGGCGTCGCCGTCATCACCGTCTCCAACCCCCCCGTGAACGCGCTCTCCCTCGACGGTATCATATCCGTACAACCCCTCCTCTCCTCCTTTCCATGCTCGGATTCCGCCCATTGCGGGGCTGGTTAGCAGCCATGTTTGCCTGCGTGGTTCTCTGTGTTGTCGCAATCTTGCCAAATTTTGCTGAACTTTCTTTTTGTGTGTGTGTGTGTGTGTGTGTTTTGGAAGAACAGGTTGTGAAATCTGAGATGATTTGTGTGCTTTGGGATATTTTGAGGGTCTATGTTAGAGTTGATATGCCAGATTTGGTTGTTACTCCATGTCTCCATGTTCCATGCTCCGAGCCATGCCTTATATATACACGAATTATTTGTTATTGCCAAGTTGTCAACATGTGTTGTGTTACTATATGCAGTCAATTTTTGTTGGCCTTGTTTGATCAGCTCTCGCTGTCGCCAAGTAATTTGTGCTGTTTAATCAAGTAACTATTTTTGTTACTAATTATAGGACCTATGGTTTCTACTTTTGCAGTGATAGCCAGCTTGCAGAGAGATTATGGGGAAGCTCTGAGGAGGAGTGATGTCAAGGCAATTGTTCTCACTGGTACTTACTTGCACATGAGCTTCTTGTCAAGGATCTTATGCTAGCGATGTGTGTTTCTAATGCCTCATATGATGTGAAGGCGCCAAAGGGAGGTTTTCTGGAGGCTTTGATATAAACGCATTCGACAAGAAGCCAAGTAAAGATTGTCCAGTGCTCTCAGTATGTTCCTGCCTTTTTCACCACCCTCACTTCCATTGCTAAATTTTTCTTTTCACCAGAAAATGAGAAGCCTGGATATCTGTCTATTGATTTTTTAACGGACATAGTAGAAGGTAACATAACCTGAGATTTCTTCTTTAAACCAAGTTTGTCAACAAGCTGAATATTTATGTCGTTAAGTTCATGTTGCTGCCAGATGCTCCGAAACCATCAGTGGCTGCTATAGATGGCGTTGCTCTAGGTGGCGGCTTAGAGCTTGCAATGGTATGTGTAGATTGCAATGGTCGAATTGTATGCTTCAACCTTTTGGGATTCTTCTTTTACTTCCAATATGTGGCTATTTTTGCAACATTGGCATTTTCTTGTGCAGGTTTGTCACGCTCGTGTTTCTACATCTTCGGTTCAATTAGGATTACCTGAACTTCAACTGGGCATCATTCCTGGGTTGGGAGGTATGCTCAAGTCCCAACCTGGTCTTTTGGGTCATCCCTTTTTTTTTTTTTTTAAAAAAAAAGAGACTCTGATCCTATATGTTTAACTACTGCGCTTTGTTGGTTTGGTTGGCTTAACTCTAATCATGGGACATCTGTCCTTGCAGCCATTACTAATAAGATATGAAATCAGAAAAGACTGTTGAAAAAGAGGAAGATAAATTATGAACTTTAAGATGTACAGAGGGCGAATACATCAGAAAATGAGCAAGAAAAAATATCTGTATTTTTCTTTTCCAAACTAACTATTTAGTGAAAGGCATAATCATTCTAAAGGAAACGAAAGAACATTTTACATGGTTTCCAAAAAAAAGGGGTCTACAAGGGCCTGTTTGGCATGGCTCCCACTCCCAGATTCTTGTAGAAGACAGAGTTTGTTGCTTAAAATAAGTGATTAATCTAAAAGTTTGAACAAGATGTCTCACACTAACAACCCTAATCTAGCCCCAACTCCAACTCCAAAATTTTTTGGAGCTATATATATTCAACTCCAGAAACAATTGGGGTTGGAGCTTGTACCAAACAGTGCCTAATTCTTTATTAAAAAAACAAGGCATACACAAATTTCCTGTTCTATGGTAACAAAATTAGATATGACGAGAGAAAGCCTCATGGATGTTTATTCCTCTGCCAAAAGAATTTTTTTATCTTTTTCCAGTTGATTGAAGGATCTTTACTTTCTACAGGAACACAACGACTGCCCCGCCTTGTTGGCCTGCCAAAAGCTCTTGAGATGTTGTTGGTATGGCTGTTTATACATTGCATTGTAGTGCATCGACAATTTCTTTTTCCATCTTTTCTTCTATGGTGGTCATGGTCATGCAAGAAAGTTAACTATGGATTGTCTTCTCTTATTAGATGTCTAAACCTCTAAAAGGAGTGGAGGCACATAAATTTGGTTTAGTTGACGCTGTAGTTTCAGCTGATGAATTGATCAGCACGGCCTGTTCCTGGGCTCTGGAAATTGTTGAAGACAAACGCCCATGGTTCAGGAGTCTCCATAGAACCGATAGACTTCCAGCTCTTGAGGAAACGAAGAAAATTCTGAATTTTGCAAGAGTTCAGGCCCAAAAGCAGTCTGCTAGTCTCCAACATCCCTTAGTTTGCATTGATGTCATTGAGGAGGGCATAATTTCTGGCCCTCGAGCTGGCCTAATGAAGGTACATCACCACTTAGTGCTAACTTTTCGAGCAATTGTTACATACCTAGTCTAAGTTGTTCTTAATGCTGTTTAATGTTCATTTTTGGTAATGACAGGAAACACTTTGTGGAAAAATGCTTGAGATGTCTCAGATAAGCAAAAGCTTAAGGCATGTCTTTTTTGCACAACGTGCAACTTCAAAGGTTGTTAGAGTCCCATTTGCTGAAGTTTATGTGGTGTTCATTCTTAATACTTCTTTCATCCTGCCTCATAATCAGAAGTTAGCAATAGATTCTTATGAACATCTGTGAAATGATAAAAGAGAATCATACCTATATGCCTTTTAATCCAATTCGTTTAAGATCAAAACAGAACAAGGTGCAGTACAATTATCTATTTAATTGTATACGATGAATTAGCATCTGAATGACTAAATGCAAAAATGTCGTGTTGCACTGTGATTTCCATGATTACTCTCAGGTAAAGATCCTTTTGGGTAGAATTTTCAGGTATAGAATTATAAATAGTACTTATGTCAAATGCATTCGTTTATCTGAGCGTCTTATGCTCTAACAGATTCCAAATATCAGCAACTTGGGGTTGACACCACGGAGAATACACAAGGTGGCTATTGTTGGGGGAGGTCTAATGGGATCTGGAATAGCAACTGCATTGATATCGAACAACCTCCTGGTAATCCTGAAAGAAGTCAATGAGCAGTTCTTAGATGCTGGTATTAGCAGAGTTAAAGGTGATCTTTTTTTGTTTCTCCAACTTTTATTGTTTGTCTTTTAAGTTTTTCATTAATTCTTCTGTTTTCCTGTTCAGCTAATCTGCAGAGCTTAGTCAAAAGGGGGCAAATGACCAAAGAAGATTATGAAAATAAACTTTCTTTACTATCTGGTGTTCTTGACTATGAACAATTTAGAGAAGCTGATGTGGTCATTGAGGTAGATCCAATATTTTCAAGTATTTCTTTTCGCTAACTTTATTCAGTAGAAAATAGCTCTACTTGAGTGCTTATTCTGTTATTCATCATGCTTGCCAGAACTTTTGTGCTATTTATAACATAGTTATGAAATTTAACTGGACTAGATCACTTAAGATGTTGGTTACAGCATCAGAATGTCCGCTTAAGATTTTTTTTTCCTCTGAAAGAAAAGAAGAACAATTTTGCCTACCTGCAGGACACAAGCACAATGATTTAATAGCAAATTTATAAGAAATAAAAAATACCAGATCACTTCCACTTAAGAATATTTTTATGATTTTTTCCATAGCTTCAGGATAAGGAGAATGATTTAATAACAACTTGATAAAATGATGACATATTATTGACACGATGAATGTTTTCGTTCTTAGTGATTGTAGAAATCTATTCATCAGTCTTTGAGTCAAGTAGTTAACTTGAACTTTTTAAGTCTATTGTAACTGAAGGAGAAAGCACTGATCTTAATCGCTGCTTGATGATAAAAACTCTTGCAGGCAGTTATTGAGGATTTATCACTAAAGCAGAAAATATTTGCTGACCTTGAAAAATACTGCCACTCTAATTGCATACTTGCCACGAATACTTCAACAATAGACCTTCATTTAATTGGCCAAAAGACATCTTGCCAGGATCGAATTGCTGGTGCACACTTCTTCAGGTAATGTGTTATGCCTCTTTTCTTGTATTCCTGTTTTTTTTCTGAACTACTGTTTATAACTTGTCTTTTGATGTATATTCTCCAGTCCAGCCCATGCAATGCCACTGTTGGAAATAATCCGTACTCATCGGACTTCCTCACAAGTTGTCATTGACTTGCTAAACGTGGCAAAACAGATACGAAAAACACCAATAGTTGTTGGGAACTGCACAGGTTTTGCTGTGAATCGGATGTTCTTTCCTTTCACACAGGTGGCTTATTTTCTTGTTGATTATGGTCTGGATGTCTACCACATAGACCATGTGATTACAAAGTTTGGAATGCCAATGGGACCTTTCCGGTAAGGATGCCAGTTTTACTGAATGATCCTATTCCTCTACGGACTTCTTTTTTTTAACAAGATATTCCTTTATAGACTTGAGCACTTAGGCGATGGCTATTAGTCTTGTTAAGCACTTCGGATGCAAATTTATTTTTATTTCCTTTTATAGTAATTTATGAATTGTCTGAATTATGTTCCTTGTAATAAAAGTATGAGGTACAGCTTTCCTGCATCGGAAAGATTCTCAGATGTTATGAGAGCAAATGAAAATTGTCTATGACTATATAAAGAAAGGTGTTTCAGCATTAACCTTACTTGGTTTGTTGCTACTGTTTCCACTCAGTACTCTGTCATGTGCAGCCATTTACTTTTATCTGCAACTGCCAACAAGTCAATTTCTCCATAAACCTGTTATGAGCCATTTTGTGCAGTTTAGATAGAGTAGATAGGATTTGGTTGCTGAACTTTTCATGCCTTAATTAAAAACTTGGACCAGTCCATTCCTCCTATCATACTTAACCTTCAGTTATGTCTAATTTTTTTTGGCTTCCGTTCCAGTAAAACTATGGTACAATACGATTTTTTGAATGGCAACAGATTCATGTCTTTTCTTCTTCCTCTTTTAGCTACCTATTACATTTTCCATGTAACCACTGTTTCTGATGTTACCTGTTTCTTTCCGTTTCTACTATAGTAATGTTGTTCTGGTGTTATCTATTTCTGATTTAGTACAACAGATATAGCATACCCATGTTTATTACTGGTCCTTTTGGTAGATATCTTCACACTTTCTTCATGTTTGTTTCTGTACTCTAGTAGATATCTATTTCTTCATTGTTTATTGAAGGGGCCTTTGTGGTGCATGTTTTCTGGACCATGAGTTCTCTGTTGTCTTGTCCGTACAGATTAGCTGATCTTGTTGGTTTTGGAGTTGCTATTGCCTCCAGAAAGCAATATCTCCAAAGTTATCCTGAGCGATGTTACAAGTCAATGCTTATTCAAATTATGCTTGAGGAAAACAGGACAGGTTTTTCATATTAACAATACATTCACTTACAATTTCTTCATGCTGTTGAGTATGATTTTGAGCTACATGTGAAGCTGAATCTCATGGCTGATATACTTTCTGGAGTGCTTGGCAGGTGAATCTTCACGCAAAGGATTTTATCTTTATGATGATAAGCGAAAGGCTTCTCCAGATCCTGAAATGAACAAGTACATTGAGAAATCAAGAAGCATGGCTAGTATTGTACAAGATCCTAAGGTACTCTCGTACTTCCTCTGTCCCAAAAAAAGCGTAACCTAGTACTAGGGTGTGACACTTAGTACTAGGTTGGGTTTGGAACCAAATTATTCTCCTTTTCTTTATGCTGGACACTTAGTACTGGCCCGTACTGCCATGCATCACATCTCACAGCTGTACTTTGGTTTGCATATTTAGATGTCGTACTTCTCAGAGTAAACTTCTCCGGGTGTCTTTTTTTTGTTCTTTTGTTACAGTAGTGAGCTTTGTAGCAAGGTGCTGAAAACCGTATGAAATTAACCTGATTTCAAAAAAAAATGATAAATTTGAAGTACAATACTAGTTCAGCACAGGTACTGTAACTAGCAAGTGAATTGCAAGGTATCTGCAGTGCTGTAGATCATAGTTTGCAAGAACATGGTTGTACACATGTATGGTTACTGCATCTTTTGGCTGCCGTTCGATATGCAAAATATGCATACCAGCAAACCTTTAATTTTTCACTGCTTCTACACAAAGAAATCTGACAGTTTCTTTCCCGTCAGCTGCCGAAATTAACAGATGATGAAATCGTGGAGATGATGCTCTTCCCCGTGGTGAATGAGGCCTGTCGACTGCTTGACGAGGGGGTTGCTATGAAAGCATCTGATCTTGATGTAGCATCCATTATGGGGAGGGGCTTCCCTTCCTACAGGTCCCTTTCTTTGTTTCTCTTCTGCATCATCTCTCACATTAATTCTCCTTCCCTGCCACTAATTACATGTTCATAACTGGTGAATCTTCCATTCAACATGTATTTTGACACCAGGGGCGGAGTGATGTTCTGGGCCGATTCGTTTGGCGCGAAATACATTTACGACAGACTGAAGGATTGGTCCAAGTTTCACGGAGGGATCTTTGAACCCTATGAATATTTATCAACAAGAGCTCGTCAGGGTTTGTCTCTGGTAAGACCTTATATAGCATATTCAATCTGCTCTGATACAGCTTTTGCGTTTACCAAACACCACTTTCCTCTCTAAACCTTTGGGTCGATGGCTTCGCCTTACAAATTTGTCGATGAAACTGCTGCAGGCCGCCATGGCTGATGGTGCAATGTCACGGCTCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019704