BGIOSGA019712

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Revision as of 02:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019712| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019712, complete gene.| tag = OS05G03...")
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Gene Name

BGIOSGA019712

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019712, complete gene.

LocusTag

OS05G0364600

Ensembl Transcript ID

BGIOSGA019712-TA

Ensembl Protein ID

BGIOSGA019712-PA

Length

8290

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18454669..18462958

Sequence Coding Region

18454669..18454732,18456792..18456883,18458325..18458390,18459853..18459927,18460076..18460175
,18460257..18460303,18460375..18460432,18460599..18460648,18460855..18460911
,18460999..18461141,18461231..18461272,18461521..18461562,18462681..18462714
,18462784..18462885,18462944..18462958

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18454669..18462958 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18454669..18462958 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATAGTATGGAACTACCAGAGTACAACAGAATGCTTTGGTTGGATAAACCAACTGAGCATGGAACGATGAGCCGACGCAACAGCCGCACCATCTATGTGGGCAATCTCCCCGGAGACATTCGCGAGAGGGAAGTGGAGGATCTCTTCTATAAGTATGGCCGTATTGTGGATATTGACTTGAAAATTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGTTTGAAGACCCTCGTGATGCACAAGATGCAATTTATGGCCGTAATGGATATGACTTTGATGGCCACAGGTTGCGGGTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGTTATGGTTACTGGATTACCTTCGTCAGCATCATGGCAAGACCTCAAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTCTCTGATGTTTACCGTGAGGGTGGAGCAACTATTGGAATTGTTGATTATACCAACTATGAGGATATGAAACAAGCGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTCACGGGCATATATCAGGGTGAGGGAGTATGATTCTGCTAAGCGCAGCCGCTCTCGTTCCAGAGGTAGAAGCCACAGCCGCTCTATCTCCAGAAGCAGAAGCCGCAGCCGTTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGATCACCATCAAGATCCCCATCCCCTGCTACTTCTCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTCCGTGACATTAACCAAAAACTCTGTATTTTTGTGAAATCTGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MHSMELPEYNRMLWLDKPTEHGTMSRRNSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRNGYDFDGHRLRVELAHGGRGPSFDRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATIGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYIRVREYDSAKRSRSRSRGRSHSRSISRSRSRSRSISRSRSRSYSRSRSPRSRSASRSHSPVKERSRSASQSRSPVKERSPSRSPSPATSPPREKSASKSPVKSRSLSRSPSPVRDINQKLCIFVKSE</aaseq>

Gene Sequence

<dnaseqindica>1..64#2124..2215#3657..3722#5185..5259#5408..5507#5589..5635#5707..5764#5931..5980#6187..6243#6331..6473#6563..6604#6853..6894#8013..8046#8116..8217#8276..8290#ATGCATAGTATGGAACTACCAGAGTACAACAGAATGCTTTGGTTGGATAAACCAACTGAGCATGGTCAACACAAGTGGCAAAACCATGCCAAACAAGCATGACTTTTAGCTAAGAAATCTATTTACACTCCATTTCCACATGAACCACATCAACTTGGATATTTTGCTTATTTCACTAGGTAAAACTACTACGATGGACACAGTTGCGCTAGCACTTAAAATGCCTACACCTGCAAGAAATATCACATTTGGAGGAAAGCATTAAAGAATTAAGCATCATAAAGGCATTCAATGCTGAATTGCTGAGAAAGAACTTAATAGGTCTTAAAGAAACCAACAACCACTTGGATAACCCCCCAATGTAATAAAGAAAAAAGTTTGTGCTACCATCATCCAGGCAGTACAAAGTAGTGCCAGAGTAGCCGTTTCAGCCAAATGAATTCATCCCAGAGAAAAATACTCGTTTGCTATGAAGTTGAGGCAGATCACATTTGCCACAAAGTTCATTGGCATGTAAAAATCCGACATAATTTAGTGGGAATCAACTCATTTGCCACAATGCCATGTGAAATGTCAAATTTTTCCTCATCTTCGTTATGTGTTAATCTCTCTCCTCTACTGCCGGCAACCGCTGCTCCCCATCTTCATCTAGCACCTAGCTCCCTCTGCTGGCGCACCGCACACGCTTTCCTCTACCTCCAGCAGCCGGCACACGCTTTCCTCTACCTCCGGCTGCCGGCACACACTATCCTCTCCTTCCAGCCACCACCGCACCCCAGCTCAGTTTGTCAGCAAACACACCCAAAGCTCCAGTCTCCACCAACAGACAGCTGAAGCTAGTGGCACGCGATAGCGATCAGACCTATGGAACACTACACATGCTTGTGGCCGGAGATGAGCTAAGAGGAACAAGATTGGGGCAAATTTGCATCACCTGTGGCAAAGGGGTGTATAAACTATTGAGGAATTTTTGCAGGCCAACGATTTCATTCATTGCAAATGTGATTACACACATCAACCCCTTCGCGAAGGAACAACCAATTTTTCTCCTATCGCAACAACATGAACCATCGAACTAGACAGACAGGCTCCACGTGTACTGAAATACCCCGAATCGTCAGCCAGCAGCGACCAGGGAACACGATGGACTCCTAACGGCGGGATCCTCGCAAAAACCCTAGGTTAGGGCCGCGGCTTGGGCGCCGCCTCGTGACCAAGCAAGAAACGATAATTCCCCCCAAGTCGCGGCGAGGGAAAGCCAACTAACTAATCGAAGATCCGGAGCGGGCTCTGAGCCCATCTACGGCGATTAAACTTACCCCGGATCGGAGAGATATCCCCGGCACGGCTAGTCGGCGACGGGGAGACGAGGACGACGAGGAGCACCGCCGCGGCGCCGCCGGAGCGGGGAGAGAAAGAGGAGAGAACTGCGCGGTGGCACTTTTCCACGGAGCCCCTCGGATTTCCTCTTTATTTAGGAGCGCCCATCGAGCCGAGACGAGAGTGCGTGCTGGCCGCGTGGGACACTGCGCTGTGGGGCCCACTAGCTGTTTGCCGCTGACGGGTGGGGCCACGCAGCCAGCGCGAATCGTAAAGCACGCGGACCCCGTCTCCTTTTTCATACATATCCTCCTCTCGCTCTCGCCCCGCTCGCTTCCGAAGCTTCTCGAGCCCTCCTCCTCCGCGCCGCCGCCGCCGCCTCCGCCTCGCCGCCGGCGCAGAGTCGCAGGTTAGCTCCGTACTCCGCTCCCCTCCCCGAACCAAGCCGACGCCGCTGCTGGAATCCTAGTACTCCTGCGCGAGTTCTAGCGTGCTCTCTCTCTCCCGTCCCGTGCCGTTGCGTCCTCGCGCTTTAGTTCTCTCGGTTGAGCGAGTGCGCGAGTGTTCTGCTTGGTTCTCCGGTAGATTTGGTAGCCCGCGATCATATCTCCTAGGTTTTTTTTTTCCTTCGGTTGAGCGGGGCAGCAATTGAATTCGTGGTCGTCAGGGTTTCTGAGAGCTGGAGATGCAGTGCTATGCTTGGTTTGTTTTGCTGTTTGCGTGTTATCGTTACGTGGCTTGACGCTACGGCCATTGTTGGATTTGTGCGTGCTAATTTAGCTGACTTGATGTTTGTCTGTCAGGAACGATGAGCCGACGCAACAGCCGCACCATCTATGTGGGCAATCTCCCCGGAGACATTCGCGAGAGGGAAGTGGAGGATCTCTTCTATAAGGTGAGCCATGATTACATTACGGATTAGGCATGTGTGTGCCATGTAACAGTGTTATCCTCTAGTACTAAAGTGGTAGGTCAGTGCAAATTTTGTTTTGGTATCAGCGAGTACATCGTAGGCTGCTTTTAGGACTTAGGAGGAAGATATTTGGGGGCAATACTGCTTTCTTATGGAATTATAAATTTGCTATGTTGGGCCCTATGGTTTTCTGTTGTGTGGTTGGAGCATTTGTTAAATACTTCAATGTGAACTAGATATCTAAGTTGCGTCTTCACGCGACCATAACCTGTCTTTTATTTACGAATATGATAATGAATTGTTTGTAACAGTTACCTATGTTAAAATTTAATTCGTCTAGTTGCAGTTTTCAAATTCTACAATTGAATTTTGTTAAGGATTGAACTTTGGAGAGTATTTGGCCCAATTTCCGAGCAATTAGGTTGAGATATAGTTTTGCGTTATGCATATCAGTTTGTTTTTCTATTTGTTGGTTATGGATATATCTGTAGGTGATAGGTATTTTTTTTATCTTAATTATTCATTCTGGATCATTTCTATAACCGACACATCTGAATTTTAGACCTGCCAGTATTGTTTAGGACTTTTGTGAATATATGATTTATTATAGTTCTATTGACATAAAATCCATATAATACACATTATTCGTTATGTTTATTGGGTCTCTGTGGCTATGTAAAGATAGTAGTGATAATCATTTTTATGTGCAGTATTTTCACTTTATATGGATTTGATTTCGCTATATTTATTCATGTTTGTAATTGAATTTATGAACAAATTGAGATAGCAATCGAGGTGTAAGTGGTGGCCATGGATCGAAGTACTGACACGGGTGATGTTGGCTGAGGAAATATATTTCAACTTGACAGAAGATTTATCTTAATATGAGTTTTACATCTTGTTAGTAAAAGAGTTTATTTTGCTTTTCTTCTAAACTTGACCTAGGCGCACGGAGAAAAGAGGATGGAGTTTGGGCTTGCAGCTGTTGTAGTTAGGATGCATACCGATCCAATTAGGCCTATTTATGTCACCGAGTTATACATGCACCACAGCTAGAGGGTACTCTAGAATACTCCTACATTTTTAACAACTACTTAAGTTTCATCCAACGGTAAAGATTGTTTCGACTTATTTTGTCTTTAAGCGTATCTGACGGTTCATATTAGTCAGAAGAAGTGGCACATCCTGGTTTCTTTTTGAGATTTACTTTTCACTTGGAGAGATTCCACCAGTCGGTTGGGCACTTGGGCACCTCTTTGTTGTTGCCATCTTATGTGGTGAACTGGTGATACCGAAGGATGTTACTGGTAGAAGGGTAGAACAATGGCATCTTGTAATTACTAAATTTTCTGATATCTTTATTTTCTTGATTATTCATACAGATAGAGTTTAACTTTTTTTTTCATTACTTTTGCTTCTGCAGTATGGCCGTATTGTGGATATTGACTTGAAAATTCCTCCAAGGCCTCCTGGTTATGCTTTTGTTGAGGTAAGGGATTAAGTATGTTATGGTGATTACTTGCTATGAGCACATTTTCTATCTAGATTTTTGCTCATCTTTTTATATATAAGCTATCATTTTATTTAGTCATAACCTTGTTGTTATTTGAGGATTTTTTTTTGGGGTCTGTGAGCAAATTTAGCACATGAAAACCGACTACAGACATTAGCTTTATCAAAATCTAACCCGAATTGGTTGCTATTTTTTTTAACTTAAAAATGGTCCACACTAAACTGGATAGCCAAAGAAAACTGGACCTTTACTAATTCTTTTCGTATGGTCAAAAGTTGCCAAATTTTCATAAGATAAACTTCGGCTTGGCGTGAAATAAAACAACCCCTGGATAACAAACTTTAGAGGTTCTGTTAGAATGATGTGTTAATATGAACCCAGGAGTGTTTTGAGCTTTGAATAGGAGGTAGCGAGGTGGGTAAGCAGAGTGCTTGCATTCTACCCCTGAATGGACTTCTTCCCAATCATGGCAAGAGGACTCTAAGGCCGGCAAGTAGATGCAAGTTGATGATTAAATAAATTTCTTGGTTTGAAATGAAGCATTCTATGGAAGCTTATATTTCAGGCATCTCTTAGCAACCCATGCGATTAGTTTAGAGCTGAAACAAAGGAATATACTATCGCAACAATTTACCCCTAACGAACTCCTCAACTGGCTTGCCTGCTTGCTTATTACAATGTGTGACTACCTCTATATACCTTGCTCAGGGAAAGGAATAGGCAAATCTCTAAAATGGATAAGCTGGCAAGCACAGGTTTATAAACAGGAGTTAGGTATGGGTTGTGTGATTTGAACGATCAAGTAACGGATACAAGACATAGGCCCCCTCCAGGTGCACACATTATTGTTCTCATGCTTTGCCTTGCTACTACTTCTGTTCTTTTTATAGAACATTTTTTTTATCTATAATCAATATATCATTTTTATTATTTTTAGGAAAAGCAGAATGGGTAGATCTTGGCGCGCGCGCGTGCACACACACAAAAAAAATAATAAAAAACTGGTTTAAGAATATCTCGCTTTTGTTATGTTGGACATGTGGTTCTCATTGGAAACTATGATGACTAACGAAAGTGCATAGGATGTGAGCAAGGGGCAACTTAAGGGTTACTATGGAGGCAAGAGAATGGAAACACCCAAATTTGTTTCTTTAAGCTCATGAGGAATTTGGGGGTGACGGAGACTGACAAAAAATGTAGGGGATGAGTGAAATTTGACATATGATCAATGAATTTTTCCATGTAGCATAAAGACAAAGGTCAGACAAACTTGCTTTAGAGGAAACTTAACAACTAGCCTCAAATCCAGTTTTGCCAAGTGTTGCTGAACTATCTAAAGAAATGCTTGTCAAAATTAACCTTGTGCAATCTGATTGTACATATAGCACCTTAGAGGCTAAGAGGACTTGATACTAACTAAAAGTGGTTCCTTATGCAGTTTGAAGACCCTCGTGATGCACAAGATGCAATTTATGGCCGTAATGGATATGACTTTGATGGCCACAGGTTGCGGGTAAGTGGATCTTGCATGATATCCGTTATCTTTCTTGAGAGAATACCAGGTGGTGAAGAGGGTAGTTCATATTTATTTATTTTTGTTGCAGCAGCAAAGAGGATAGTTTTGTTCTTTGTCGTAATGTTAATCTTATACCTTTATTTAGGTGGAGTTAGCTCATGGTGGCAGAGGCCCTTCTTTTGATCGATCAAGTAGCTATAGCAGTGCTGGGCGCCGTGGTGCCGCTAAACGTACTGATTACCGAGGTACGTACTTCTGAACTCAAGCTTTACAAACTTGATTGGATACATCAGTGTTCTTATTTGCTCTATTCATGGAATGTGCAGTTATGGTTACTGGATTACCTTCGTCAGCATCATGGCAAGACCTCAAGGTATTGATGCAGATGAACTCCCATACAATTATTCACTCTTCACGAATCTTGAGTTTTACTTCCATTTTCAGGATCATATGAGGCGAGCTGGTGATGTCTGTTTCTCTGATGTTTACCGTGAGGGTGGAGGTTAGTACTGAACACTTCTATGCTCTTCTGTTGCTGATATTAATTTTGGTATGAATTGGGCAGTAGTTTGTTTTGATAATACAGCAACCATTTAAGCTGTATTATCTTTTTCCATTCATGTTTCAGTAGTTCTTACTTCTTAATACTGAAATTTCATGTGTTTCAGCAACTATTGGAATTGTTGATTATACCAACTATGAGGATATGAAACAAGCGGTAAGTTTGAATTAGTTCTATGCATTTTACTTTCCAGAAGTGAACACTGCCATGTGCCATCTGGAAATTCATGTTTTGGTTGGTTCCTTTAATAATAGAAAAAGGGCACTTTGTGATATGCCAGACACCTACTTTCTTCCCAATCATGCATGTTCTTATCTTCCCGTGAAGATACACCTGACAAGCAGTTTTTTGTTACCTTACAGATAAGAAAGCTTGATGACTCAGAGTTCCGTAATGCATTTTCACGGGCATATATCAGGGTATGGTCATACTGGAAATGTTTCTGCACTTCATTTAACCTAATCTCAAGTTGAAGATTTACGTACTCATGGACATGTCTGTTAAAGGTGAGGGAGTATGATTCTGCTAAGCGCAGCCGCTCTCGTTCCAGAGGTAGAAGCCACAGCCGCTCTATCTCCAGAAGCAGAAGCCGCAGCCGTTCGATCTCCAGAAGCAGAAGCCGCAGTTATAGCAGAAGCAGGAGTCCAAGGTATGGTTTGAATCTCATAATGCTCAAATGAGTTTGTTATGGTAACAACAACATGAATATTATTACAATGTGCTGTTTTTTCCTTCCAGATCTAGGTCTGCTTCTCGGTCTCACTCACCTGTGAAAGAAAGGTATGCACAGTTCCATTTTGATTTTGAATTTTTCAAAGTTAAGAAACTGAGTAGCTTTGGCATGTGTTATCTTCATATTGGCTATTGAAAAACTGCACATGATTTTTTAAGAAATGGACCCCCTCCAATGTTGATTATTGAAATTTGATTATGTAATTAGCCTATGTTATCCCATATCTCCCTCAAATAATTGCAAGAAAGGAAATGTCATTAACTTAAATGAGTTTACTGCTGTTCTCTGCTTCCAGATCTAGGTCGGCTTCACAGTCTCGCTCACCTGTGAAGGAAAGGTATGCGTAGTTCCATTTCGATTTTGAATTCATAACATATTACATAGTACATGGAATGCTTTCGATTCATTGCGATGGTGTGATACTGAGATTCTCGGATTAATACTATGTTACAAAGTTAAGAAACTAAGTAGCATTTGCATGCGTTATCTTCAATTTGCCAAAAAAGAAACTACATATGATTTTCTAAGAACCCCCTCCAATGTTGTACATTCAAATTTGATTATGTGATTAGCCTGTGTGATCCCATATCTATCTCTAATAATTGCAATACACGAAATATTGTAAAATGAAATAGGGCCGGCTCTTTATATTCTCATATAATTTGTCATTTCCTTTCTGGTTTGTACTTTAAATGTTATGCTTTCGAGATGCATTTTTTCTTCTGTACATGCACTTTGAGTTTCCACTCTCTGATGATTAAACATGCAGAAAACTGGATAGCTGTCATTTGTTGTTGAAAATTTGCTCTTGTCTTTCCTAGATTTGGGACATGCAGCTATTTGGGTTGCGTTGGTAGGATATTGGATGCGTTGAGAACCAAAGGATGGTTTGGAACGTTGGATAGTTCTGCTGGCTAGTGACATACTGTATGACAAGTGGACTACAACCAGCGATAGGAGCAAGATAGGGCTGGCTCTAAACATATTTGGACTTATGGAGTGCATTTCGTGGTATAATTGAAGTACTATTGACTTACGCATTTCTATTCTCAAATGTAAACCTCGGCCTTGCACCCCTATTGGTTATTCTCAAACATAACCTCACCTTAATGTTGAAGTTTATTTCTAAATTACACTTTCTGATGAAATAAGTGTGTTTAGCGATTAGCTCTTTAACCAATTTGTGATCTATTGTGGCTTCACCTTCATTTGGAGGACTCGTGATTTTACTTATAAGGTCTGTCATAGTTTTTCAAAAGATGACATGTTACATGTACAGTGGAAAAAGGTGGTCCCTTTACCTATGCTCATCCAAAACACTTCTCCACATGTTTACTGTTTATTGCTCTCAATCTCATGTGTATTGATGTTACCATATTCACACATATTTTGATCAAACTGTTGTAATATCCCTTTACTGAGTAACAATTTCTTGGCTTTTGGAACATTTTGCAGATCACCATCAAGATCCCCATCCCCTGCTACTTCTGTAAGTTTTCCAAACAAGTAACTTATATTCTATAAATTTGTTCCATATAGTAACCATTGTCTCGTGCAGCCTCCTCGTGAAAAGTCAGCAAGCAAGAGCCCTGTCAAGAGCAGAAGTTTATCCCGATCCCCATCTCCTGTCCGTGACATTAACCAAAAACTCTGTATTTTTGTGAGCCTTTAATATGCTTGAAGTTTCCCATATTGATATGGTCAATGCTTCCTTTCAGGTGAAATCTGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019712

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