BGIOSGA019714

From RiceWiki
Revision as of 02:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019714| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019714, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019714

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019714, complete gene.

LocusTag

OSJNBB0111K12.6

Ensembl Transcript ID

BGIOSGA019714-TA

Ensembl Protein ID

BGIOSGA019714-PA

Length

2461

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18535832..18538292

Sequence Coding Region

18535832..18535850,18536228..18536290,18536867..18537351,18537942..18538292

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18535832..18538292 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18535832..18538292 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCCATAGTCCTCGAAAACAAAAACAGTGGAGTTCAAACGGATGGTCCCTTGGTTAATGGTGGTTTTGACAGTTCAGTTGTTGAGGACATCGAAAGCACTGATGATGCGTTAGTTGAGAATGACAGGGTATTTGAACAATATTCTTTAAGAGAGATTCTTCTTACAGTTGATGATGTCCAGTCCCGAATTCTTAGTCTTCAGGGTCGCCTCAGCAATGCTCGCAGCAAATACAAGAAGTTGTCACAATGCTTAGACCGTAAACAGGTTAAGGTGCCTCAAAAGATTCAGAATCAGATGACCTGTTGTAAGAAGGATGGAAGACGTTCTCATCAGAAAACAAAGTGTATGCATACTTTGCTTCAGAAGGATGACTTAGATAGATCACTTGCTGTGGTTCCACCTGTATTTGGTAGGTCCACTGACTGTGTGTTGGAATGTATGAAGAAAAATGATGCACAAGAAGATGCAGTACAATCAGATCTAAATGGAATCACAATTGAGATGTTCTGTGGTAAAGATAATTTCCTAACCAATGCCCATGTAGGGGAGTTATACAAAGAAAGCGCTGATGATGTCCTCATAGATAATCAAGCAGCCAAAGAAGGTTATCAGCTATTTGAGAAGGTCAAGCCAGAGGAGCATTCAGAGCTGGTTATGCCTCCTTCCAAAGTACAAAAAGCAAGTGCAGACATAGTGGACTATGAACAAGTTCAAGAAACAGCTCCAGTTGCCAAGCAAATCATCTCTGGAGACAAGCGTGGACAGAAACCAAATAAGAAACATGGGCTTCCTGTGCTTGCGAAGAAAATTAAAACTGAGAAAGATCCCGGCAATATGAAGAATGAAAAGACTGTTTTGGTGGCTGTGGATCCCCGGAGGAGTACACGAGTTCGAAAACCCAAAACTTATTGA</cdnaseq>

Protein Sequence

<aaseq>MAPIVLENKNSGVQTDGPLVNGGFDSSVVEDIESTDDALVENDRVFEQYSLREILLTVDDVQSRILSLQGRLSNARSKYKKLSQCLDRKQVKVPQKIQNQMTCCKKDGRRSHQKTKCMHTLLQKDDLDRSLAVVPPVFGRSTDCVLECMKKNDAQEDAVQSDLNGITIEMFCGKDNFLTNAHVGELYKESADDVLIDNQAAKEGYQLFEKVKPEEHSELVMPPSKVQKASADIVDYEQVQETAPVAKQIISGDKRGQKPNKKHGLPVLAKKIKTEKDPGNMKNEKTVLVAVDPRRSTRVRKPKTY</aaseq>

Gene Sequence

<dnaseqindica>1..19#397..459#1036..1520#2111..2461#ATGGCGCCCATAGTCCTCGGTGTTGCACACGCGAGGCCGATGCGCGGATAAGCACGGAGGATGGCGACGAGGAGGATGTTGTGCTGAGCACGGGGCCGGCGCAGCCGCCGCCCAGCTTCTTCCCGCGCGCTCGCTTGCCGCGACGCCCGCTCCTCCTGTCGCCGCCCCCGTCGCGTGGTGGCGGAGAGGCGGTGGCAGCGGCGGCAACTGAGCGCGGCTGCGGATGGGGAGCGGCCGTCTCCGTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAGGGCTAGAGAAAATTGTTGTCTTGAATGAGTATCATATTTTGCATGGGGTTCGTGTTTATACTTGACTGTAACGAAGACTCTTGATCTTTTGCAGAAAACAAAAACAGTGGAGTTCAAACGGATGGTCCCTTGGTTAATGGTGGTTTTGACAGTTCAGGTAAGTTACATGGTTGTGCCTGTGTGCTCAAGATTATTTTCTGTAGTTTAGAAGGAGAAAATATAATTTTTGTTGCAGTCACTCTTCAATCTGAAATGCAAGTGGTTGTTAGAGCATTAACGTACGTGCTTTTGCCCCTTTTTTTTTGTCAGTGGTCAGATTATCGCACTGTGCATTGTTTTGGGGTCTGAATTCAGTATGCCTGTACTGTTAAAATTTCAGTTTTTCTAAAGCACACGTTTAGCCTGTTCCTCGGGATGCTAGAGTTGCAGGCTTGCGTGCAAGCTGCATACCTGCAAAAATTGGTTGGGTAAAATTGTTTCTGTATACAGTATCTATCGGAGCAGCCATCGAACCTGATATCAGACTGAGTTTCTGTCACATTTAGTTTGTTTATCTCTTTTAGTTTATCTTTTATGGTACTTTTCTATCTTTTGGGGATTGATTGTGCACGATGTTATATTAATGAAGCTGAAATGCAGGAAATGTGTATTTTTGAACTCTTTTATATATTTTAATGTGGAATTGTTCCTCTTAATAGTTGCTAATCCTCTCTATTTGTCGCTCTTCACGCAGTTGTTGAGGACATCGAAAGCACTGATGATGCGTTAGTTGAGAATGACAGGGTATTTGAACAATATTCTTTAAGAGAGATTCTTCTTACAGTTGATGATGTCCAGTCCCGAATTCTTAGTCTTCAGGGTCGCCTCAGCAATGCTCGCAGCAAATACAAGAAGTTGTCACAATGCTTAGACCGTAAACAGGTTAAGGTGCCTCAAAAGATTCAGAATCAGATGACCTGTTGTAAGAAGGATGGAAGACGTTCTCATCAGAAAACAAAGTGTATGCATACTTTGCTTCAGAAGGATGACTTAGATAGATCACTTGCTGTGGTTCCACCTGTATTTGGTAGGTCCACTGACTGTGTGTTGGAATGTATGAAGAAAAATGATGCACAAGAAGATGCAGTACAATCAGATCTAAATGGAATCACAATTGAGATGTTCTGTGGTAAAGATAATTTCCTAACCAATGCCCATGTAGGGGAGTTATACAAAGAAGTAAGTTTAGCTATAGCATCTTATTCTTCTCTATTTTGTCACACGATATTTTAGAACTAATGTATGAAGAACACTTTGACCAGTAGCTGGTTCCTAATAAAAAGGAACATAGGATATACCAACTCTTTGCCCATCCAATAAACCATGTAGATCTCTGTCATGTCATGTTAGGATTTCTAGTTGCATGTGTGTGGGTGTGGGACCTCTAGTCCTTCATAATCTTCTAGAAGTCAACTATAAATATTTTATGTCGAAGTATATGGTGAAAAACAAGCTGAGCATGATGGTGTTTTCTTGAATATGCAGTAGATCTGTGTAACGTCATGGTGTTTCCTGCTTTGCGATATACAGTCACAAGGCGATAGTGTGATATGCGATATACATGTGCTTGATACCATCATTTGTAATGATTTGCTGATCTTTCATAGATCTGACATTGCCTCGTAATCATAATGATTCCTATTTTTATACTGAATTATTTATCAAAGCTAAATAGTGTACTCCCTAAACTGTTGTAAGAAATAGGGACTCGTGCTGGATCAACATATTTGCAAAAACCTTTTCATTTGATGGTTTGGTTATCTTTGCAGAGCGCTGATGATGTCCTCATAGATAATCAAGCAGCCAAAGAAGGTTATCAGCTATTTGAGAAGGTCAAGCCAGAGGAGCATTCAGAGCTGGTTATGCCTCCTTCCAAAGTACAAAAAGCAAGTGCAGACATAGTGGACTATGAACAAGTTCAAGAAACAGCTCCAGTTGCCAAGCAAATCATCTCTGGAGACAAGCGTGGACAGAAACCAAATAAGAAACATGGGCTTCCTGTGCTTGCGAAGAAAATTAAAACTGAGAAAGATCCCGGCAATATGAAGAATGAAAAGACTGTTTTGGTGGCTGTGGATCCCCGGAGGAGTACACGAGTTCGAAAACCCAAAACTTATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019714