BGIOSGA019715

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Revision as of 02:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019715| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019715, complete gene.| tag = OsJ_182...")
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Gene Name

BGIOSGA019715

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019715, complete gene.

LocusTag

OsJ_18256

Ensembl Transcript ID

BGIOSGA019715-TA

Ensembl Protein ID

BGIOSGA019715-PA

Length

3349

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18552253..18555601

Sequence Coding Region

18552253..18554913,18555515..18555601

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18552253..18555601 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18552253..18555601 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTCCGCCGAGGAGGCCGCGGCTGAGCGGCGGAGGCGCAAGCGGAGGCTCCGCATCGAGCCGCCGCTCCACGCGCTCCGCCGCGACCCTTCCGCCCCGCCCCCGCCGGCGCGACCCCAACGCGCCGCGCCTCCCGGACACCACCTCCGCGCTCGTCGGGCCCCGGCTCAGCCTCCACAACCGCGTCCAGTCCCTCATCCGATCCGGCGACCTCGACGGCGCCTCCGTCGCCGCCCGCGCCGCGGTCACCTCCCGCGTCCGCCCCACCGTCTTCACCTGCAACGCCGTGGCGGCGTCCATGGTCCGCGCGGGCCGCCACGACGACGCCGTCTCGCTCTTCGACTTCTTCTTCCGCCGATCCAACATCGTCCCCAACGTCGTCTCCTACAACACCCTCATCCTCGCCCACTGCGAGGCCGCCCGCGTCGACTCCGCGCTGCAGGTGTACCGCGAGATGCTCGACAAGGCCCCCTTCTCTCCCTCCGCCGTCACCTACCGCCACCTCACCAAGGGCCTCGTCGCCGCGGGCCGCATCCAGGACGCCCTCGATCTCCTGCGCGAGATGCTCAACCGCGGCCAGGGCGCCGACTCCCTCGTATACAATAATCTCATCGCCGGTTACATCGAGGAAGATAACTGGGACAAGGCATTCGAGCTCTTTGAGGAGCTCCAGGGGAGGTGCTTGGTCTACGATGGCGTCGTGCACACCTCCTTCATGGAGGGGTACTGGAAGAAAGGAATGGACAAGGAGGCCATGGAGAATTACCAGTCACTTCTGGACAAGAAGTTCAGGATGACCCCCGCCACCTGCAACGTGTTGCTTGAGACGCTCTTCAAGCATGATAAGGACAAGGAGGCGAATGACCTCTGGGAGACCATGATCGACAACCACACCCCGCCGAGCTTCATTGGCATCAACAGCGAGTCCTACAATGTCATGGTCAATCAGTGCTTCAAGAAGTGCAAATTCCATGAGGCAATTGAGGTGTTCCACCGGCAGCCCAGGAAGAACGTCCAGATGGACGTTGGCTGCTTCAACAACATCATCGGGAAGCTTTGTGAGAATGGAATGCTTGAAGAGGCAGAGAAGCTTTTTGAGGAAATGGAAACCAAGTCAGTGCTTCCAGACGTGTACACCTACACTTACCTGGTTGATTCATGCTTCAAGGTGGGTCGTGTGGATGATACAATTCAGTATTTCTATAAGATGGCAGATGGAAGGGAGCATGGGCCGAAGTTCAATATTGGTTTCTTTAATCGGATGTTTGAAGGGCTTACAGAAGCTGGCCGGATGGATGATGCCTTGAAGGTCTATGGAAGGATGCCTGACAAGGAGATCAAGCCAAACACAACCACCTTTGAGACCCTGGTTAATGCATTGTGTAAGGAAGGGGACTTGGATAAAGCACGGGAGTTGGTGAGTGACATGGCAAAAGGCGGTGTCACTCCTCCTCCTGAGTTCCGGGATTCTGTTATTGACATTTTCAAGAACGCTGGCCGGCAGGAAGAGATTGAGAAAGCTTTTGAAGAGAAACCAGTGCCATTGCCTCCTCAGCCAAGGCCAGAGTATCGCCCTCACAGTTCACCTCAGAGGCTGCCAGGATTTGCATCCAATCAGACACGGGGTAGCTACATGCCTCACCAAGGCCAACCGACATATGGTTCTCAACCACTTCATCCTGGCGTTGGTGGATCCCAAGCGATACAGCCTCAGGGGATGCCTTTGAGACCTCAGCAACCTGTGTTTGGAGGCCCTCAAGTTGATAAATCAGAGTTTGGTGGCCGCCCGTTGCAGCATGGACCTAGCGCCCCTGATCCACGACAACCTGGGGTTGTCTCCATGACTCAACCTCCAAATGTCAGTACTCCCAATACATGGCAGCATTCTGGAGTTCATGCAACTCAAGGAACACACCATGGGATGGGTTCTCCTCGTCCATGGCAACAATCAGTTGGCATTGGTCAAGTGCAACAAACTGATTATAGCTCGGGTCCACCGATGCAGCCTGGTTTTGGTCACCCTCAACCACCACAACCAATGCATAGTGCTCCTCAGACTCAGCAGCCTGGGTATGGCACATCTCATCCATGGCATACAGGGTTCAATGCTCCACAAGTGCAACAGCCTAGTTATGGTGGACCTCAGTCATCGCAGCATGCTGTTGGCTCCACTCAGCCACCGCAGGCACAGTTTGGTGCTCCTCAAGCACCACCACCATTACCTGGTTTTCACTATCAGAACAGACCAGAGTATGGTCAAGCAGTAGATCAGCATAATCGTTTTGGGTCTCCCCAGGGTGAGCCAAGATTTCACACACAGCCTCAACAGCAGGGATTTGATGCTCAGGCTCCTGGAAATCATGCTCTGCAAGGTCAGAACAGTTTTAACGCCCGTCGAGGACAAGTAGGGTTTGGAAATCAAGGGGCACCGCCTGAATATGGGGCTTCCCCAAGCCAACCCTCACATGGTGCTGCCTGGAACCAAAGAGGCTATGGATTGTCTGAAGATCAAGAAGATGTAAATCAGCAAGTGGTGCCTCATGCTTATGCACGTGTTCCTCAAGCATCAGCTAGTTCAATAGCATTTGGTTTGGGACTATTTTTCGGAAATGAAATCTTTTGGACCAGGGAAAAATATTGA</cdnaseq>

Protein Sequence

<aaseq>MAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPRRPRLSGGGASGGSASSRRSTRSAATLPPRPRRRDPNAPRLPDTTSALVGPRLSLHNRVQSLIRSGDLDGASVAARAAVTSRVRPTVFTCNAVAASMVRAGRHDDAVSLFDFFFRRSNIVPNVVSYNTLILAHCEAARVDSALQVYREMLDKAPFSPSAVTYRHLTKGLVAAGRIQDALDLLREMLNRGQGADSLVYNNLIAGYIEEDNWDKAFELFEELQGRCLVYDGVVHTSFMEGYWKKGMDKEAMENYQSLLDKKFRMTPATCNVLLETLFKHDKDKEANDLWETMIDNHTPPSFIGINSESYNVMVNQCFKKCKFHEAIEVFHRQPRKNVQMDVGCFNNIIGKLCENGMLEEAEKLFEEMETKSVLPDVYTYTYLVDSCFKVGRVDDTIQYFYKMADGREHGPKFNIGFFNRMFEGLTEAGRMDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMAKGGVTPPPEFRDSVIDIFKNAGRQEEIEKAFEEKPVPLPPQPRPEYRPHSSPQRLPGFASNQTRGSYMPHQGQPTYGSQPLHPGVGGSQAIQPQGMPLRPQQPVFGGPQVDKSEFGGRPLQHGPSAPDPRQPGVVSMTQPPNVSTPNTWQHSGVHATQGTHHGMGSPRPWQQSVGIGQVQQTDYSSGPPMQPGFGHPQPPQPMHSAPQTQQPGYGTSHPWHTGFNAPQVQQPSYGGPQSSQHAVGSTQPPQAQFGAPQAPPPLPGFHYQNRPEYGQAVDQHNRFGSPQGEPRFHTQPQQQGFDAQAPGNHALQGQNSFNARRGQVGFGNQGAPPEYGASPSQPSHGAAWNQRGYGLSEDQEDVNQQVVPHAYARVPQASASSIAFGLGLFFGNEIFWTREKY</aaseq>

Gene Sequence

<dnaseqindica>1..2661#3263..3349#ATGGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTCCGCCGAGGAGGCCGCGGCTGAGCGGCGGAGGCGCAAGCGGAGGCTCCGCATCGAGCCGCCGCTCCACGCGCTCCGCCGCGACCCTTCCGCCCCGCCCCCGCCGGCGCGACCCCAACGCGCCGCGCCTCCCGGACACCACCTCCGCGCTCGTCGGGCCCCGGCTCAGCCTCCACAACCGCGTCCAGTCCCTCATCCGATCCGGCGACCTCGACGGCGCCTCCGTCGCCGCCCGCGCCGCGGTCACCTCCCGCGTCCGCCCCACCGTCTTCACCTGCAACGCCGTGGCGGCGTCCATGGTCCGCGCGGGCCGCCACGACGACGCCGTCTCGCTCTTCGACTTCTTCTTCCGCCGATCCAACATCGTCCCCAACGTCGTCTCCTACAACACCCTCATCCTCGCCCACTGCGAGGCCGCCCGCGTCGACTCCGCGCTGCAGGTGTACCGCGAGATGCTCGACAAGGCCCCCTTCTCTCCCTCCGCCGTCACCTACCGCCACCTCACCAAGGGCCTCGTCGCCGCGGGCCGCATCCAGGACGCCCTCGATCTCCTGCGCGAGATGCTCAACCGCGGCCAGGGCGCCGACTCCCTCGTATACAATAATCTCATCGCCGGTTACATCGAGGAAGATAACTGGGACAAGGCATTCGAGCTCTTTGAGGAGCTCCAGGGGAGGTGCTTGGTCTACGATGGCGTCGTGCACACCTCCTTCATGGAGGGGTACTGGAAGAAAGGAATGGACAAGGAGGCCATGGAGAATTACCAGTCACTTCTGGACAAGAAGTTCAGGATGACCCCCGCCACCTGCAACGTGTTGCTTGAGACGCTCTTCAAGCATGATAAGGACAAGGAGGCGAATGACCTCTGGGAGACCATGATCGACAACCACACCCCGCCGAGCTTCATTGGCATCAACAGCGAGTCCTACAATGTCATGGTCAATCAGTGCTTCAAGAAGTGCAAATTCCATGAGGCAATTGAGGTGTTCCACCGGCAGCCCAGGAAGAACGTCCAGATGGACGTTGGCTGCTTCAACAACATCATCGGGAAGCTTTGTGAGAATGGAATGCTTGAAGAGGCAGAGAAGCTTTTTGAGGAAATGGAAACCAAGTCAGTGCTTCCAGACGTGTACACCTACACTTACCTGGTTGATTCATGCTTCAAGGTGGGTCGTGTGGATGATACAATTCAGTATTTCTATAAGATGGCAGATGGAAGGGAGCATGGGCCGAAGTTCAATATTGGTTTCTTTAATCGGATGTTTGAAGGGCTTACAGAAGCTGGCCGGATGGATGATGCCTTGAAGGTCTATGGAAGGATGCCTGACAAGGAGATCAAGCCAAACACAACCACCTTTGAGACCCTGGTTAATGCATTGTGTAAGGAAGGGGACTTGGATAAAGCACGGGAGTTGGTGAGTGACATGGCAAAAGGCGGTGTCACTCCTCCTCCTGAGTTCCGGGATTCTGTTATTGACATTTTCAAGAACGCTGGCCGGCAGGAAGAGATTGAGAAAGCTTTTGAAGAGAAACCAGTGCCATTGCCTCCTCAGCCAAGGCCAGAGTATCGCCCTCACAGTTCACCTCAGAGGCTGCCAGGATTTGCATCCAATCAGACACGGGGTAGCTACATGCCTCACCAAGGCCAACCGACATATGGTTCTCAACCACTTCATCCTGGCGTTGGTGGATCCCAAGCGATACAGCCTCAGGGGATGCCTTTGAGACCTCAGCAACCTGTGTTTGGAGGCCCTCAAGTTGATAAATCAGAGTTTGGTGGCCGCCCGTTGCAGCATGGACCTAGCGCCCCTGATCCACGACAACCTGGGGTTGTCTCCATGACTCAACCTCCAAATGTCAGTACTCCCAATACATGGCAGCATTCTGGAGTTCATGCAACTCAAGGAACACACCATGGGATGGGTTCTCCTCGTCCATGGCAACAATCAGTTGGCATTGGTCAAGTGCAACAAACTGATTATAGCTCGGGTCCACCGATGCAGCCTGGTTTTGGTCACCCTCAACCACCACAACCAATGCATAGTGCTCCTCAGACTCAGCAGCCTGGGTATGGCACATCTCATCCATGGCATACAGGGTTCAATGCTCCACAAGTGCAACAGCCTAGTTATGGTGGACCTCAGTCATCGCAGCATGCTGTTGGCTCCACTCAGCCACCGCAGGCACAGTTTGGTGCTCCTCAAGCACCACCACCATTACCTGGTTTTCACTATCAGAACAGACCAGAGTATGGTCAAGCAGTAGATCAGCATAATCGTTTTGGGTCTCCCCAGGGTGAGCCAAGATTTCACACACAGCCTCAACAGCAGGGATTTGATGCTCAGGCTCCTGGAAATCATGCTCTGCAAGGTCAGAACAGTTTTAACGCCCGTCGAGGACAAGTAGGGTTTGGAAATCAAGGGGCACCGCCTGAATATGGGGCTTCCCCAAGCCAACCCTCACATGGTGCTGCCTGGAACCAAAGAGGCTATGGATTGTCTGAAGATCAAGAAGATGTAAATCAGCAAGTGGTGCCTCATGCTTATGCACGTGTAAGATGAAGGATATCTCCATGATGCATACTCAATAAGAGCAACTCAGGTGAACTCAGTTGCACACACATCATATTTTCATAGTATCAGTTCATCATATTTATTAATCATTGGCTTTGCTCTGTTCATACTCAACTGAAAAGTAAAGAAGTAAGAATATACAGCCTTTAAAAGAAGCTCAATTTATTACTGTCACATGTGGTCAATATAACAACTAAGATGGTTAAAGTCTTGTGTGATGCTTCAAGACAAGCATGTATGCTTCTAATAAGTTTTGAGTTGCTTCTGTTCATTTGTTTGGTGATCCTAATTGCATACTCCCTTCGTCCCAAAATATAGGAACCTAGTACTGGATTAGACCTACTAGGTTGTGTCTAATCCAATAGGTTGCTATATTTTGGGATGGAGGGAGTAGTCATTTATGGAGTTCATACTACTGTAGAGCCACTTCATGTTGCATCAGTTTTGCTCCTTTACACTTGTTACAGCTTATTTGGCCATCGAAATGTCTCAAACTCTTCTACTACTAGAGCATATTAAATCTTGCTGAGTTTTGCTGGGGCATAACATGGCTAACTACTGCTATATGTTTGAAATGCAGGTTCCTCAAGCATCAGCTAGTTCAATAGCATTTGGTTTGGGACTATTTTTCGGAAATGAAATCTTTTGGACCAGGGAAAAATATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019715

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019715&oldid=48471"