BGIOSGA019719

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Revision as of 02:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019719| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019719, complete gene.| tag = OsI_196...")
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Gene Name

BGIOSGA019719

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019719, complete gene.

LocusTag

OsI_19667

Ensembl Transcript ID

BGIOSGA019719-TA

Ensembl Protein ID

BGIOSGA019719-PA

Length

5524

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18575590..18581113

Sequence Coding Region

18575590..18575757,18575896..18575959,18576353..18576411,18577201..18577327,18578843..18578930
,18579010..18579265,18579379..18579494,18580046..18580142,18580450..18580585
,18580706..18580793,18580948..18581113

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18575590..18581113 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18575590..18581113 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACCAGGCGCCCTCTGCATCTTCTGCTCGTCTTCCTCTCCTCGCCATGGCTGCTGCTGCTGCTGCTTCTGCTTCTTGTTGTTCAAGGCATGAGCTCGCTGCAGTTCACGCGGGATGACTTCCCCCACGACTTCGCGTTTGGAGCTGGGACTTCGGCTTACCAGTATGAGGGGGGAGCTGCTGAGGATGGGAGGACCCCAAGCATCTGGGACACCTACACACATTCAGGGAGGCATCCAGAAGATGAAACAGGTGATGTGGCCTCTGATGGCTACCATAAGTACAAGCTGCCAAAGGGAGCCATTGTTCCCCAATTGATGAGCAAAGAAGGTGCCGGAGCCACCCAAACCCGTAGAAGCCATAGGAGACATTCGAGCAAGGGCGGCAGGAGAAGCGACGTATCATGGTGGGACGGTATTCAGATACATGTTGTCATGTATCACATGGACCTTCCTCAAAGTCTTCAAGATGAGTATGGTGGGTGGATTAGCCCCAAAATTGTAGATGACTTCACAGCATATGCTGATGTGTGCTTCCGCGAGTTCGGTGACAGAGTTGTGCATTGGACAACTGTACTTGAACCAAATGCAATGGCTCAAGCTGGCTATGACATGGGGATTCTGCCGCCTAACCGTTGCTCATATCCATTTGGCAGCAATTGTACAGCTGGAAATTCCAGTGTTGAGCCATACTTGTTTATACACCATAGCCTGCTAGCTCATGCTTCAGCTGTTAGACTTTACAGGGAGAAGTACAAGGTTGCACAGAAGGGCATTATTGGCATAAATATATACTCCATGTGGTTCTACCCATTCACAGATTCAGCTGAAGATATTGGTGCCACTGAAAGGGCAAAGAAGTTCATTTATGGCTGGATCTTGCATCCTTTGGTGTTCGGAGATTACCCAGATACCATGAAGAAGGCCGCTGGTTCCCGCCTTCCGATCTTCTCTAACCATGAATCTGAGATGGCTGTAAAATGGTTTTGCTTGTTGCTCTTGAAACAGTTTGTACCAGGAACCATAGTAGATCCTCGGGGGCTAGAGCATGCACTTAAATATATTCGGGAAAAGTACGGAAATTTGCCGATTTATATCCAGGAAAATGGCAGTGGATCATCAAGTGAAACCCTGGATGATGTGGAGAGGATTAACTACTTAGCAAAATACATCGCAGCCACACTGAAAGCCATCAGGAGTGGTGCCAATGTGAAGGGGTACTCCATGTGGTCATTTGTTGATCTCTACGAGCTCTTGGGTGGTTACTCCACTTGGCATTTGGCCTTGTTGCTGTCGATTTCGACAGCGAAAAACGGAGAAGGCAGCGGAGACGCTCTGCTAGCTGGTATTCAGAGTTCCTGA</cdnaseq>

Protein Sequence

<aaseq>METRRPLHLLLVFLSSPWLLLLLLLLLVVQGMSSLQFTRDDFPHDFAFGAGTSAYQYEGGAAEDGRTPSIWDTYTHSGRHPEDETGDVASDGYHKYKLPKGAIVPQLMSKEGAGATQTRRSHRRHSSKGGRRSDVSWWDGIQIHVVMYHMDLPQSLQDEYGGWISPKIVDDFTAYADVCFREFGDRVVHWTTVLEPNAMAQAGYDMGILPPNRCSYPFGSNCTAGNSSVEPYLFIHHSLLAHASAVRLYREKYKVAQKGIIGINIYSMWFYPFTDSAEDIGATERAKKFIYGWILHPLVFGDYPDTMKKAAGSRLPIFSNHESEMAVKWFCLLLLKQFVPGTIVDPRGLEHALKYIREKYGNLPIYIQENGSGSSSETLDDVERINYLAKYIAATLKAIRSGANVKGYSMWSFVDLYELLGGYSTWHLALLLSISTAKNGEGSGDALLAGIQSS</aaseq>

Gene Sequence

<dnaseqindica>1..168#307..370#764..822#1612..1738#3254..3341#3421..3676#3790..3905#4457..4553#4861..4996#5117..5204#5359..5524#ATGGAGACCAGGCGCCCTCTGCATCTTCTGCTCGTCTTCCTCTCCTCGCCATGGCTGCTGCTGCTGCTGCTTCTGCTTCTTGTTGTTCAAGGCATGAGCTCGCTGCAGTTCACGCGGGATGACTTCCCCCACGACTTCGCGTTTGGAGCTGGGACTTCGGCTTACCAGGTAATACGTGTATGTATGTATAGGAGAGATGATTCTGAATTTTCTCTGAATTTCCTGCCTGATTCTGAATTACAAAGGACAGGCTTGACATGCATGCATGTGTATGTTTCATTTGGTTGGTCGTTTTGGATTTTGCAGTATGAGGGGGGAGCTGCTGAGGATGGGAGGACCCCAAGCATCTGGGACACCTACACACATTCAGGTATGGCTTATGAGCACTCGCAATAATCTCTCTCTGATTTTTTTTATTTGAACGAAACTCTCTCTGAATTTGGATTATTGAAAGAATTCTCTGGGGGTTTCGATTGGTCTACTGCCAAATTGCTTCCTAACCAATGTTAGCTTTCTTCCATTGTCTAAAAGATTGGTATGCTAGTTTGGAGTTCAACGTAAAATCGATCCTTTTCCTTTTCAGATAGCTCGACAATTTTTGTAGATGGAAGTACATGATAAATTGTTTAAGTGAGTTTTTATATATTAATGCTGAAAATAAGTAGGCATGATAATGTTTTTTACCTATGTCAATTTGACTTGTCAAGTTGCTTCCATTATTAAAAGAAAAAAAGTCAATTTGACACGTGGTCTGCTGCATCAGGGAGGCATCCAGAAGATGAAACAGGTGATGTGGCCTCTGATGGCTACCATAAGTACAAGGTATGATTCGATAAAAAAAAGAACATACTCCCTCCGTTACATGAAAAATCAATCTAATACTGGATGCGACACATTCTAGTACTGTAAATCTAGACAAGGCTTGCCCAGATTCGTAGTATTAGGATGTGTCACATCTAGTATTAGGTTGATTTTTATCGGACAGAGGGTGTATGTTAGTTGGATCACGTATGGATTTTAAAAATTCTAAGAAATCTCTTTACGTTTGTAACCTTTGTTCATTCCGGATTTTTCTATAGGAAGATGTCAAGCTAATGAGTGAGATAGGCCTAGAGGCTTATAGGTTCACCATTTCTTGGTCAAGGCTCATTCCTAGTATGGCAACTACATATCAAGTTTCTATTCTCCGTACCGTATCATCAGTGATGATGTGTTATCTTCCTCACCACATGTTCTGATTTTAAGTTTGGACAATCCAGGTGGAAGAGGAGCGGTTAATCTAAAGGCGCTGCAATTTTACAACAGTATGATAAATGAGCTAGTGAAAGCAGGCAAGTATACCTTGATTCCATCAAATATATTGAGGATATAAGTTGGGGATTGAACTGCTTATGCATTGTGTTAGTATGTACGAGGGAGATTGAGAGAGATTTCACGCAGCTCAAGCGCAGTGCTGGCTGGATTTCGATTAAATAGCCGTTTGAATAAATACTGGAAATTGAATATACTTGCTATACAAATCATACTCAAGGAGGGTAGTTGAAGGGAGAGTTTGGTCCCTAATCCATTAGCCCTAGCTGCTGCAACCCCCTTCATTCACCTCGTCACTAGCTGCCAAAGGGAGCCATTGTTCCCCAATTGATGAGCAAAGAAGGTGCCGGAGCCACCCAAACCCGTAGAAGCCATAGGAGACATTCGAGCAAGGGCGGCAGGAGAAGCGACGTATCATGGTGGGACGGTGTGTGCAGTTGGCATGTGGCGAATGAGTCGAATCGTCAAGTGACCAAACATAGAGACTAGACCTGAAATCCTAGAATAATTGTCTCCGTAATCCTTTGGTCATAATGTCAGTGAATTGGTGTAATAAGGGAACGCGGGGAACATGAACATGACCAATGGCCACCTTTTCACTAATGAAGCGAATGCCGATCTCAATATGCTTTGTACGCTTGTGCTGAACCAGATTAGTGGAGAGGTAGATGGTGTTCCCATTGTCACAGAAGACAACGGTGACAGAGGAGAGAGGAGCATGTAGCTCACAAAGCAGCCGACGAAGCCAACAACATTCGGTGATGGCGGTAGGCAATAGCTCGATATTTGGCCTTGGCACTAGAGCAGGAGACCATGGCCTACCTAGTCGGTGTCGGTGTAGTCAATGAGCGACATTGTCGTAGTAGCATGAAGAACCGAGTCATGGCCAAGTATCCCTATGACATATCGTAGGATGCGCTTGATCAAGGCAAGTTGGGAATCTCGTGGAGCATGCATACAAAGACACACCTACTGGATGGCATAGGGGAGGTTAGGCCGAGTTAGAGTGAGGTACTAATTAAAGTGCCCTAGTAAGGCGTACTAATCAAATCCGGAAAGTTGCATTTTTACATAGAATCGAGTAGAAGTACTTGCTGTACAAAATCCTACTAAATCAATCAAGTACATAAAATTGAGTTAGGTCTAAGGGCATATATTAAGTATAGAATATGGAAAAAGACTAAAATGCCAACACATACCCTTAACAACCCCACTTAGATGCAATGTGATGCAATAAAATTGCACTTGAAAGGTAAAATAAACAAAAGACTAAACACTAGGACAAATCCAAAGTCCATGTTTGGGAACGAGAGGGAGAGATGGGCGCGGTCGAGCCAAAGAGGAGACGTTGGTTATGTGCTCATGTGAAGTAGAAGCCAGTCGACTCAGGTGCGGTGGCACGAGGAAGGTCATATTAGATCAAGAAGGGTCCGAGGCGATAAACAGACGTACCTGCTGCTTGACGACGAAGATGAACTACGTGACTAAGAAGGACAATCGAAAACGAGAAGAAGATTGCTCCCGGGTAATCGCTCCTCCCAGGAGCAAACGACGACAGAAGTGTTAGAGCTGCTAAGGTTTGGGTCATTTAGGATCTCTGCTTTAGTACCATGTCAAATATTAACGATAGAAGTTTGGGATTAAACTGCATATGTATTGTACTAAGCCTAATGGACATATACTGATCAGTACAATAGATGGGAAAAGACTCAAATACCCACACATACCCTTAACAGATTCTCCTATCAATTTTAACCTATCTTCAATTGCACGTATACTTGCCCTCTGAAAAGAAAGGTAGTCTCAAAATGAAGCTAATGTGCATTCACTAATGTACACTTACGTAATCACCTATAACAGAGTCATCAATTTTAATAAAAATATGATGAATGGTAAGTAACATATGATGAGATCAGCCTTTCTATTTCTAATTCATGAACAGGTATTCAGATACATGTTGTCATGTATCACATGGACCTTCCTCAAAGTCTTCAAGATGAGTATGGTGGGTGGATTAGCCCCAAAATTGTGTAAGCACTGAGCAATAATTTCATAATCATGAATTATAGGAGTCATCAGAAAGTTAATCCTCTTGCCTTTGTGTTGTAGAGATGACTTCACAGCATATGCTGATGTGTGCTTCCGCGAGTTCGGTGACAGAGTTGTGCATTGGACAACTGTACTTGAACCAAATGCAATGGCTCAAGCTGGCTATGACATGGGGATTCTGCCGCCTAACCGTTGCTCATATCCATTTGGCAGCAATTGTACAGCTGGAAATTCCAGTGTTGAGCCATACTTGTTTATACACCATAGCCTGCTAGCTCATGCTTCAGCTGTTAGACTTTACAGGGAGAAGTACAAGGTGGGTATGCATTACAATCTGAACTTTTCTGCTTCTTCTGAATATCTTTTGAAAATTTCTGTGTGTTCTAAATTATTTTTATGAATTGAAGAAACTGAATTTAACTGTTTCAGGTTGCACAGAAGGGCATTATTGGCATAAATATATACTCCATGTGGTTCTACCCATTCACAGATTCAGCTGAAGATATTGGTGCCACTGAAAGGGCAAAGAAGTTCATTTATGGCTGGTATTGTCATGTTATATATAATATCTCTTAGTGTATTACTATATGCATACTCCTCACTTTAATTACTGTTCCTATAGCATTTCAAGTTCAAGTTAATTATTTGTTAATAGTGGAAATATGGGGAAAATCTGACACGATAATTAGAATGGGGAAAATACATGCCTCTCCAGAACAAAGTTATCTCTTGTGTTCCCTCTTGATTTGGTTGTAAGTTGTTACCAGCCACTTCAGTGAACTCTACTGTTATTGCATCTTACTATAATTTTTATATTTCTCACTGTATTACTAAATTCACTCCTCAGTTTACCCTACCTTTGAACTTTCATGTTCAAGTTAATTATTTGTTCATAGTAGAAATATGGGGAAAGTCTGACAAAACGATAATTACCCAGGGGAAACACATGCGGCACTCTAGTACAATTCTAGTGTTCCTTGTAGATTTGGTTGTAAGCTTATTAACAGTCAATTCAGTGAATTCTACTGTTATTGCATCCTTAATTTTCATAGTTGACTCTGAATCCCGACATTGTGTCATGTAACCAAATTTGCAGGATCTTGCATCCTTTGGTGTTCGGAGATTACCCAGATACCATGAAGAAGGCCGCTGGTTCCCGCCTTCCGATCTTCTCTAACCATGAATCTGAGATGGTTACTAATTCGTTCGACTTCATTGGATTGAATCATTATTCCTCAGTCTACACGAGCAATAATAATAACGTAGTGAAGGCACCGTTACAGGACTTGACTGCTGACGTTGCTACTTTGTTCAGAGGTTGAAAATTCATATGGATATGCTTTTATTGTGCATATATTTTAAAAGTATATGAAGTTCACTCATTTTGCGTGTGTGTGTGTATGTGTTTGCAGTGACCAAGAATGACACACCTACTCCAGTGGTGATAACCGATATTACTATTTTTGCTGAAAACTACTGAACTTATCGTAACTTCTGCAGGCTGTAAAATGGTTTTGCTTGTTGCTCTTGAAACAGTTTGTACCAGGAACCATAGTAGATCCTCGGGGGCTAGAGCATGCACTTAAATATATTCGGGAAAAGTACGGAAATTTGCCGATTTATATCCAGGAAAATGGTTAGTTCAATCCCTTCAATTATGTAGCACTCGCAGAGTCTCAGCTGTTAACTTTAAGGTTCAGAAAAATATGATTTATAGCTCATATTCTGTCACTAATTTCACTTGGCATTGCATCAGGCAGTGGATCATCAAGTGAAACCCTGGATGATGTGGAGAGGATTAACTACTTAGCAAAATACATCGCAGCCACACTGAAAGCCATCAGGTGCTTAAGCCTTTGTGCTTCACTAACTGATCTACTCTTTCTCTAGTAGAATATTTCCATATACTCTAAGTACACATCTCTCCCTAATCATAAGATTTCACTCGTGGATCTTAATACTGAATGACTCATCGATGGATCGATCGATTAATTGTAGGAGTGGTGCCAATGTGAAGGGGTACTCCATGTGGTCATTTGTTGATCTCTACGAGCTCTTGGGTGGTTACTCCACTTGGCATTTGGCCTTGTTGCTGTCGATTTCGACAGCGAAAAACGGAGAAGGCAGCGGAGACGCTCTGCTAGCTGGTATTCAGAGTTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019719

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019719&oldid=48475"