BGIOSGA019724

From RiceWiki
Revision as of 02:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019724| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019724, complete gene.| tag = OsI_196...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019724

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019724, complete gene.

LocusTag

OsI_19672

Ensembl Transcript ID

BGIOSGA019724-TA

Ensembl Protein ID

BGIOSGA019724-PA

Length

6641

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18628917..18635557

Sequence Coding Region

18628917..18629072,18629525..18629588,18630492..18630550,18631037..18631112,18631226..18631297
,18632355..18632397,18632509..18632764,18633655..18633770,18633967..18634187
,18634460..18634488,18634643..18634787,18635111..18635204,18635323..18635557

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18628917..18635557 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18628917..18635557 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGCCTACACCTCCTCGCTCGTCTCTCTCCTGCTGCTGCTGCTGCTTCTCTTGCTCGTCGCCGGTGAGGCGACGGCGGAGGCAGCTCTCAACTTCACGAGGCAGGATTTCCCCGGGGACTTCGTCTTCGGCGCCGGCACATCTGCGTACCAGTATGAGGGGGCTACCGGTGAAGACGGAAGGACCCCAAGCATCTGGGACACTTTTACTCATTCAGGGAGGATGGCGGACAATAGCACTGGTGATCGGGCTGCCGCCGGATACCACAAATACAAGGAGGATGTTAAGTTGATGAGTGATACTGGATTGGAGGCCTACAGGTTCTCCATCTCTTGGTCTAGGCTTATTCCGAGAGGAAGAGGACCCATCAATCCTAAAGGACTCGAGTACTACAATGACCTGATAGATAAGCTAGTCAAAAGGGCTCTTCAAGATGAGTACAATGGCTGGCTCAGCCCAAGGATCATTGAGGATTTCACGGCGTATGCGGACGTGTGCTTCAGGGAGTTCGGCGACCGGGTGAGGCACTGGACCACCGTGGGCGAGCCCAACGTGCTGTCCATCGCCGGCTACGACAGCGGCGTCATCCCGCCGTGCCGCTGCTCGCCGCCGTTCGGGACCAGCTGCGCCGCCGGCGACTCCACCGTGGAGCCGTACGTCGCCGCACACAACTCCATCTTGGCTCATGCCTCCGCTGTCAGGCTGTACAGGGACAAGTACCAGGCTAAGCAGAAGAGCGTCGTTGGCACGAACATCTACAGCTTCTGGCCCTATCCGCTCTCCCGCAGCTGTGCAGACATTGACGCAGTTCAGAGAGTATTGGACTTCACGATTGGTTGGATACTGGACCCCTTGGTGTATGGAGACTACCCTGAAATCATGAAGAAGCAAGCCGGTTCCCGGATTCCATCCTTCACAAAAGAACAATCTGAGTTGATCCGTGGGAGTGCCGATTTCATTGGTATAAACCATTACAAATCATTGTATGTTAGCGATGGATCGAACCGCGAAAAGGCAGGCCTTCGGGATTATAATGCTGATATGGCTGCACACTTCAGAGTTTCAAGGAATGATACACCGAGCGATAAGTATGCCCCTTCCAAGACCCTAAGCGATCCGAAGGGGCTGCAATGTATGCTCGAATACCTCAAAGACACGTACGAGGGCATTCCTGTTTATGTTCAAGAAAATGGCAAGTTCTCAAACTCAATATCTATCCATGTACAGCCCAATGGTTTCGGGCAGTTCGATAAGGAGGATTCACTGAATGACACCGAAAGAGTGGAGTACTTGAGTAGCTACATGGGCGGCACATTAGCTGCACTAAGGAATGGAGCCAATGTGAAGGGTTACTTTGTGTGGTCATTCCTGGATGTGTTCGAGCTGTTCGCAGGATATCATTCGCCATTCGGCCTGCACCATGTCGATTTTGAGGACCCCAGTTTGCCAAGGCAGCCAAAGCTCTCTGCTCAGTGGTACTCCAAGTTCTTGAGGAGTGAAATTGGAATAAACATAGAAAAAATGATTAGTCCCGATGAACATGAACACGCTTATTATCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAAYTSSLVSLLLLLLLLLLVAGEATAEAALNFTRQDFPGDFVFGAGTSAYQYEGATGEDGRTPSIWDTFTHSGRMADNSTGDRAAAGYHKYKEDVKLMSDTGLEAYRFSISWSRLIPRGRGPINPKGLEYYNDLIDKLVKRALQDEYNGWLSPRIIEDFTAYADVCFREFGDRVRHWTTVGEPNVLSIAGYDSGVIPPCRCSPPFGTSCAAGDSTVEPYVAAHNSILAHASAVRLYRDKYQAKQKSVVGTNIYSFWPYPLSRSCADIDAVQRVLDFTIGWILDPLVYGDYPEIMKKQAGSRIPSFTKEQSELIRGSADFIGINHYKSLYVSDGSNREKAGLRDYNADMAAHFRVSRNDTPSDKYAPSKTLSDPKGLQCMLEYLKDTYEGIPVYVQENGKFSNSISIHVQPNGFGQFDKEDSLNDTERVEYLSSYMGGTLAALRNGANVKGYFVWSFLDVFELFAGYHSPFGLHHVDFEDPSLPRQPKLSAQWYSKFLRSEIGINIEKMISPDEHEHAYYQ</aaseq>

Gene Sequence

<dnaseqindica>1..156#609..672#1576..1634#2121..2196#2310..2381#3439..3481#3593..3848#4739..4854#5051..5271#5544..5572#5727..5871#6195..6288#6407..6641#ATGGCTGCCTACACCTCCTCGCTCGTCTCTCTCCTGCTGCTGCTGCTGCTTCTCTTGCTCGTCGCCGGTGAGGCGACGGCGGAGGCAGCTCTCAACTTCACGAGGCAGGATTTCCCCGGGGACTTCGTCTTCGGCGCCGGCACATCTGCGTACCAGGTATGCTAATTAGGGAGTATACACATTAACATGACGAAGCTTAATTAATTTTCATATATGATATATTTACATATATATAAGATTTAGGGACGCAGATTCAATAACATTCCCCCGTGACATTAAGTCACTGACATGTGGGACCCACATGTGTCTGGATCCACGTGGGTCCCACATGTCAGTGACTCAATGTCACGGGGAATGTCACCGGCGCAATGTCACCGAATCCCAATCCAGGATTTAGACGGACTGTATGTAGTGTATAACTATATATGCCATTAATTGATTTTCTGAGACCGCGGATATACTCATCGTTTTAATTGTACATGACTTTGGATCAGTCAACCATTGAGTTTTTGTAAAAAAAAAAAAAGTTTTTATTGCTTGGAGCCTTGGTTCTTAATTAGCTGTGCATAAATGTATGTAGTTTTTGCTTCCTTTTTTTTTTATTACAGTATGAGGGGGCTACCGGTGAAGACGGAAGGACCCCAAGCATCTGGGACACTTTTACTCATTCAGGTAATCGATCTTAATTTCATCCATTATTACTAATTAAATCACTACTTGTAAGTTCATGTAGCGAATGCATATACAATTGAGATCCTCTGCATGCAGTACTGCAGAGGACCTACATCCATGCATATATGATCAAGCTACCTAGCTATTAATCTCTACTCTTCTCTCCCATAAAAAAACAAATCTAATATGGCATGTGGCACATGTTAGTAATACGAATGATAGACTCTATTAGAATGTGTCGTATCCCGTAATAGGTCTGTCTTTTATGGGATGGGAGAGTAAGTTACATGGTCAAGAAAATTCATATATGTGTCCAACAGAAAGTTTATATTTTCTATGGTCCTAAACATAAAGGTAATTGTAACTCCTCAAAGTCGTTTTGAGCATGAGGTCACTTTGAAACATAAGATATGAAAAACGTGAGAATAGAAAAAACGAAGGCATCGAAGTATCAAAGAAAGAATTAAGCCAAAGTAAAGTTTTCAAGAGTTTTGTTCTCTTACTTATTTTCATATGGAATTGATTGTAGGAATGCAATTCTATGCAAAATTTCATACTTTCTTCATATATATGAATCAAAGTGGCCTACAGGATCCTAAGAAAATTGAACCCTCCAAAATCCTTTGTCAATCCTCCATTTCAAAGGTTCCCTATGTAGTTTTAGAACTTTTAGTTATTTTTTTATCATATTTTCTTTCATGTTTACCCTTCTCAAATAAATGCTTCTCCTCGCACAAGCCAATGGTTTACATTTCCTATTAGTTAAAATTTAGGGCAACTATAATTTGAGTCAATTTTCTTAATTGTTATGTACAAGCCTAAAACCTCCTCTATTTGGAATCATAGGGAGTGCGCTACATCGATCTTTGAGATTTTCCGACCATCTGGTTGTGATATTTGCAGGGAGGATGGCGGACAATAGCACTGGTGATCGGGCTGCCGCCGGATACCACAAATACAAGGTAGGCAGAAGGCATGCACAGTGTACAGCACATCACATTGATGCACAATCGATAAGCTCAAAATGTTGTTAGGTTTTAATTTGGTTGGCATGGGTAAATCTGGATAGAGGGGTTGATTATGTCTAATTCAATACTAGAACAATATACTTTAAGACGGAAGGAGTAGTTTGTAATTTTAAATGCCGTGTGTTTGTTCTGGGATTTGATGAATTCTCTGACCCAATCAGATGCGTAGTTACCTAGCAGTATTGGATATGGATATCAATCGACTCTTTCTTTTTCAATAAGATAATGGCTCGCATATTTGTTTTTAACATTAAACCCACACAAAGCGCCTACAACACACTCACATATGCTTAATGCACATTTAAAAAGATGGAGAGACCAGCCAGAAGTAACAACGGAATCGTATGCTCGAAATAAATTTTGCCAAGCAGTACTAATCAAAATATATACTAATTGGAAGTATATATCTGAATTTTTCAGGAGGATGTTAAGTTGATGAGTGATACTGGATTGGAGGCCTACAGGTTCTCCATCTCTTGGTCTAGGCTTATTCCGAGTAAGAAAATATATACTAACCGCAATTAACTTGGGGAACTTGCAAAAAAATGCGTCTGGCCCTTACTGTTAAGTAATTTTAACTTTTAATCTATGGTTTCTATGATCACACAGGAGGAAGAGGACCCATCAATCCTAAAGGACTCGAGTACTACAATGACCTGATAGATAAGCTAGTCAAAAGGGGTAACTCTGAACAGATAGTGCTGTATTTCTAGGATTTTTGTGATATCAGACTGGATTTTAGGATTTAAGTCCCTCTGTTTATGATCATAAGAGAAAAAACAGAATTTTCTGGTTTACTTGATTTTTCTTCAACATATCTTTACCATATATAATTTTTTCAGTTCATATAAATTAACAACGGAATAGTATGCTCAAAAATTATTTTTTAATTCAAATTATCTCCCCAATTTTCTTCAGAAATTATGGTGCCCTTGAAGTTTTTTTAAAGCTGTTAGTGAAGGGACCACCTATATATTTGTCGACAAATTTTCTCCTAAAAATTTGACAGATGTAATTATAGTATAATCGTAGTGTAATTACACTGTAATTTGCATGTAACTACAGTGTAACTTATATGTAAGTTTCACGTAATTTTGAATCGCTAGATCTATTACAAGATTTGTTTTGGTGAGGAACAAAAAAAAATTACAGCACACATATATGTGAAAGAATTTGTTCCCACAACCTCCATTTTACCGAAATAACATATTATGGAGAGATTTTTGAAAGTTACATACAAATTACATTATAGTTACAGTGTAATTACACTACGATTGTGCTGTAATTACATCTGTCAAATTTTTAGGGGAAAATTTGTCGATAAATTTATAGCAAAATTGTTAGTGAAACATTGTAATAGCTCCATATTTAAATATAGACTTTGTTGATTTTATTGGGTCTTTAGTATGTAACTTTGACATCTATTTTTCTATTAGAATATAAGAATAATTTGTAACAAAATTATAATATTCTAAAGTGCTTATAAAGAAAAATCTACGCATACAACTTTTATTTTTTTTCAATCTTAATATTTCGAGAATTGTTGATAGATAAAATTTCAAAAGTTCGACAGAATAATATCGTATATTTATATATCACTCAATCCATTCTTGGTGGTTTCCTGCTAAACTCTAAGGTGCATAAATCTTTTGCGCAATCCCTAAGAAAGGAGAAATTTGTGATTGTTCTATGGGGATTGAGATACATGTGACTCTCTACCACCTCGATTTCCCTCAAGCTCTTCAAGATGAGTACAATGGCTGGCTCAGCCCAAGGATCATGTAAGATATACACTTCGATCTTTGATCAACCCCCCGATGATGATCACCACCCAGCTCTGATGAGCTGAGGCTCTGAAATTGTAATAACTTGGAGAAAAAAAAATTGTGCAGTGAGGATTTCACGGCGTATGCGGACGTGTGCTTCAGGGAGTTCGGCGACCGGGTGAGGCACTGGACCACCGTGGGCGAGCCCAACGTGCTGTCCATCGCCGGCTACGACAGCGGCGTCATCCCGCCGTGCCGCTGCTCGCCGCCGTTCGGGACCAGCTGCGCCGCCGGCGACTCCACCGTGGAGCCGTACGTCGCCGCACACAACTCCATCTTGGCTCATGCCTCCGCTGTCAGGCTGTACAGGGACAAGTACCAGGTGAGTGAACGAGTGAGCAAAAACATTTCGGAATGTAATTAAGAACATTCATGGGGGACCGAAATTTTCTGAATTTTGGAACTTACGATGGAAAAATTTTGAAATTTGAATAAATTTCTACTGAATTTAAACCAACTTTTCAAAATGCTAAATTTTGAACAGCTATTTTTTTTTGCCAAATCTGAGCATTCATTTTACTAAATTTATAAATTTAGATATCACTTGCCTGAAACACATCCTACCGCTATACCTGAAAGAAAAACGTCCAAATAACCCTCCTAAATTTTGATTGAAAATCTATCTAGCATCCCGAAGTTTTAAATTGGACATTCAACTTTTAAAGTTTACAATACCATTCAATGCCCTCTAAGTTGGTTTTACAAACTCGTTTTTATTTAATTTGCATATAAGTTGGCTGAGTTTTTATCATGTAACATACGCATTGCACATATGTTAAAATTTTCACTTAAATCTTTTCTTTTACCTCTTGTTTGCTCGTATTTAGAAGAAAAGTACCAGCGTAACAATAGTATGACATCACTGTATAAATTGACAACCTGCAATTGACGATACATATATTATATTAGTTATTTAAAGCCACTGGTTTAAGATCCCAAATATGCAAAACCACTATCTAAAACCACGTTAGAAGGTAATATGAACGGTATGTAAAGTTTAAGAGGTTGTATGTCCGATTTTAAAGCTCATGATTACATGAACTTCCATCCAAAATTTAGAAGGATATTTGGACTTTTTGCTACTTAAAATTTAGGGAATTTGAAGACCTGAACGCACAGCTGAACTCTGTTCGGATTTTCAGAACTGAAAGATAGCTCGAAAAGATCTGTGCAGATTGCTCTATTGTTACCAACATGCGTCAACGATTGCAGGCTAAGCAGAAGAGCGTCGTTGGCACGAACATCTACAGCTTCTGGCCCTATCCGCTCTCCCGCAGCTGTGCAGACATTGACGCAGTTCAGAGAGTATTGGACTTCACGATTGGTTGGTGAGTGATCCGTTTCTTTTACGTTCTTTTACTTCTTAAAATTTTTTAAAAAGAAAAATTGACCATATACAATTATATATACGATGAGATTTTTCATACAAAAGTTATATATGCAATGAGATTTTTTTTTTTGTGGGGGGGGGGATTATATGCAATGAGATGATGAGGAGACTTGAAATTGACCATTCCTGATTAGGATACTGGACCCCTTGGTGTATGGAGACTACCCTGAAATCATGAAGAAGCAAGCCGGTTCCCGGATTCCATCCTTCACAAAAGAACAATCTGAGTTGATCCGTGGGAGTGCCGATTTCATTGGTATAAACCATTACAAATCATTGTATGTTAGCGATGGATCGAACCGCGAAAAGGCAGGCCTTCGGGATTATAATGCTGATATGGCTGCACACTTCAGAGGTACTACTGTCTCCGTCCCAAATTAAGTTCACTTTGAGATGGAGGGAATAAGTTTTAAGTTTACGGTGAAAGCTGGTTTACCATGTATGCCATATTACACCTATGAGAATCTGAGACTTGTGAATCGAGAGACATGACCCCTTTTTCACAAGTAAATAGTAGTGTTATATACTTCCATTATTTAAAAACACTCTAGGAAGTAGTACACAGTACACATGACACAATATGATTATTATCTATTCTAACTACTCGTTTGACTTTTTATGTTTCAGTTTCAAGGAATGATACACCGAGCGATAAGGTATTTGATCCTTTTTTTCATGCTTTCAGTTGTCAAACTAAATATATACATATATGAATTATTCAATGGAGACAAATTTCATGAATGTTTCTTTTTTCCCTTCTGCAGAGGTACTAAATATTCTCATTTCATTTTTTTTGCGTTTTTGGTACAGTATGCCCCTTCCAAGACCCTAAGCGATCCGAAGGGGCTGCAATGTATGCTCGAATACCTCAAAGACACGTACGAGGGCATTCCTGTTTATGTTCAAGAAAATGGCAAGTTCTCAAACTCAATATCTATCCATGTACAGCCCAATGGTGTTCTTCAACAGCGACATATCGTTATTTGATTAAATGTGCATTACAGTAATTCAAAAGTATATGGTGCTTGCACTGTAAAGTTTGTATTGGAAGCTCTCTTGATTTGAGAAAAATCTATGCTGAAATATTTTTAAAGAATTTAAATTCTGCAGGAACTGAAACACCAATCTTTTACATTTATAACCAGTTTTACATTTTAGAAAGAATATATAGTCAGTAAAGAAATCTCCATTTATAATGTAAAACTGTGATTTCATTGACGTCTTTACTGATTTAAATTATCTTCTAAAAACAGTGTTTATCTATTTACCAAATTTTAGGTTTCGGGCAGTTCGATAAGGAGGATTCACTGAATGACACCGAAAGAGTGGAGTACTTGAGTAGCTACATGGGCGGCACATTAGCTGCACTAAGGTAAGTTATGTTCCTTTCAGAAACTTGATACACGGTGTTTATCTTTTCAAAATTTTTTAAAAGAACACTGGATTTTATCTGAACATATATATGGGTGTTTGTGCATATGCTGATGCAGGAATGGAGCCAATGTGAAGGGTTACTTTGTGTGGTCATTCCTGGATGTGTTCGAGCTGTTCGCAGGATATCATTCGCCATTCGGCCTGCACCATGTCGATTTTGAGGACCCCAGTTTGCCAAGGCAGCCAAAGCTCTCTGCTCAGTGGTACTCCAAGTTCTTGAGGAGTGAAATTGGAATAAACATAGAAAAAATGATTAGTCCCGATGAACATGAACACGCTTATTATCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019724

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019724&oldid=48480"