BGIOSGA019738

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Revision as of 02:56, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019738| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019738, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA019738

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019738, complete gene.

LocusTag

OSJNBA0025P09.5

Ensembl Transcript ID

BGIOSGA019738-TA

Ensembl Protein ID

BGIOSGA019738-PA

Length

6504

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18932965..18939468

Sequence Coding Region

18932965..18933076,18935137..18935191,18935261..18935381,18935429..18935497,18936115..18936342
,18936545..18936734,18937371..18937762,18938884..18939468

Genome Context

<gbrowseImage1> name=IndicaChromosome05:18932965..18939468 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:18932965..18939468 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTGCTTTCCGTGCTTCGGGTCGGGCGGCAAGGGGGAGGCGAAGAAGGGCGGCGGCGGGCGCAAGGACGGCGGCTCGGCGGATCGCCGCGTCGCCCGGGTCGGATCAGGTCCATGGTGGCTAACTGGCCATGACCTTGAAGGCAGTGGTTGTGTTTGGGAATGGGGGCTGCATCCATGGCTGCCGAAATCAAAACTTGAGGGTGGCAAAGCTTTTTTGGCTGTGGGGACGAGCTCAGTGGCAGCTGAATTTGTAATCAATGGCACATCGTTGGGGCTGGGAGAGGAGAGGGAAGTCCAGCAGTTGAGCCGCTTAGAGTACCTTGTGGACCATGGTAGCGTGCCATCTGGCATGGTGGCCCCTAACACTAGATCATTTTCTCTAGATAAATCAAAATCACAGGGTGGATTGGACTCTAGGAAGGATGCATTCATCCCAAGGGATGCGAATGGTCAACCTATTGCTGCACACACTTTCACTTTTCGTGAACTTGCTGCTGCCACTAAGAACTTCAGACAAGATTGTCTATTGGGGGAGGGAGGTTTTGGCCGCGTATATAAAGGACACTTGGAGAATGGGCAGGCTGTTGCAGTGAAGCAACTTGATCGCAATGGACTTCAAGGAAATAGAGAGTTTCTGGTTGAAGTCCTTATGCTTAGTCTATTGCACCATGATAACCTGGTTAACCTAATTGGATACTGTGCTGATGGGGATCAACGTCTCCTTGTATATGAGTTTATGCCATTGGGATCACTTGAGGATCATTTGCATGATATTCCACCTGACAAGGAACCTCTCGACTGGAATACACGGATGAAGATTGCTGCTGGTGCAGCCAAGGGCTTGGAATTCTTGCATGACAAGGCAAATCCTCCTGTTATTTACAGGGATTTCAAGTCATCGAACATTCTTCTTGGTGAGGGATACCATCCAAAACTATCAGACTTTGGCCTGGCAAAACTTGGCCCTGTTGGTGACAAAACTCATGTTTCGACACGTGTTATGGGAACTTATGGCTACTGTGCCCCAGAATATGCGATGACTGGGCAGCTTACTGTTAAATCTGATGTGTATAGTTTTGGTGTTGTGTTCCTTGAACTGATTACTGGCCGCAAAGCAATCGACAACACCAAACCACTTGGAGAGCAGAACCTAGTGGCATGGGCCCGTCCCCTGTTTAAAGACCGCAGGAAATTTCCTAAAATGGCTGATCCATTACTTGCGGGCCGATTTCCTATGCGGGGCCTGTATCAGGCTTTAGCAGTTGCTGCAATGTGTTTGCAGGAGCAAGCTGCCACTAGGCCTTTTATAGGAGATGTGGTCACTGCTCTTTCATATCTTGCTTCCCAGACATATGATCCAAATGCACCTGTTCAGCACAGTCGGAGCAATGCATCTACCCCTAGGGCCAGAAACCGTGTTGGTGCGAATTTTGACCAGCGTCGTCTTCACTCACCAAATCACCAACAATCTCCAGATTTAAGGAAAGAAGGCACCACAACATCAAAATATGAAGCTGAGGTTAGCAGGACTAATTCTGGCAGTGGCTCTGGTCGACGAGCTGGCTTGGACAGCATGGATGTGACAGGTTCACAGATGGGTAGTCCTGCTCACGCAGGAAGGAAGAGGGAATCATCGCGGAGTACTGATAGGCAGCGTGCAGTCGCAGAGGCCAAAACATGGGGGGAGAATTCAAGAGAAAGAAAGTGGCCAAATGCTCGTGGCAGCTTTGATAGTACAAATGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MGCFPCFGSGGKGEAKKGGGGRKDGGSADRRVARVGSGPWWLTGHDLEGSGCVWEWGLHPWLPKSKLEGGKAFLAVGTSSVAAEFVINGTSLGLGEEREVQQLSRLEYLVDHGSVPSGMVAPNTRSFSLDKSKSQGGLDSRKDAFIPRDANGQPIAAHTFTFRELAAATKNFRQDCLLGEGGFGRVYKGHLENGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHHDNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDIPPDKEPLDWNTRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDNTKPLGEQNLVAWARPLFKDRRKFPKMADPLLAGRFPMRGLYQALAVAAMCLQEQAATRPFIGDVVTALSYLASQTYDPNAPVQHSRSNASTPRARNRVGANFDQRRLHSPNHQQSPDLRKEGTTTSKYEAEVSRTNSGSGSGRRAGLDSMDVTGSQMGSPAHAGRKRESSRSTDRQRAVAEAKTWGENSRERKWPNARGSFDSTNE</aaseq>

Gene Sequence

<dnaseqindica>1..112#2173..2227#2297..2417#2465..2533#3151..3378#3581..3770#4407..4798#5920..6504#ATGGGCTGCTTTCCGTGCTTCGGGTCGGGCGGCAAGGGGGAGGCGAAGAAGGGCGGCGGCGGGCGCAAGGACGGCGGCTCGGCGGATCGCCGCGTCGCCCGGGTCGGATCAGGTGCGGTTCTTGTGGTGGGGGTGTGGGGGGAAAGGGTTGGATCTTGGGGTGGTTTTGTTTGTAGGAAATGGTAGCTGATGATTTGCTCCGATGTGGTCAGTTCATGAGATTTTGGTGTGATTCGGATCAATGGGCGATTCGAACTTTGTGCTAATACGTATTCGATTTTAGCGAATGGGTTGGAGACAATCTCGAGGTTTCGGCGCGGATGGTGGTGTAGTGGTATTTGGGAGATTTTCCTTTTGTTCGTGTTAGGCTATTTTGATGGTATGAGTGCTTGATGTTAGTATGCATTACTTATCTATTTGTAGTTTATCTGTGATGTTTTGGATCGGTAAGCTAGGTCATCCTTTTTGGTTTATCCTATGACTGATAGAAGCCAGCGGCTTTAGTGATATTTTCGTGGATGGATAGGAGGTTGTGGATGGATAGGAGGTTGCAGTATAACTCTTGCAGTATTGGATTCAGGGGGACAAGGAAATTAATGTTTCACTTCTTGTTTATACTGATAAATGATGTGGAAGTACTTGCAAGACTACTATAGATGTATATGAAGAAATGGACGAGTCAGGGAGACTTAGCTTCCCCCCAGGAAATATCACCTGCAATTTTAGCAATAATCGGTAACAATGTGGTTAACCTTGTTAGTAAAGCTGACCTTTGAAAGCATTTTATCTGTTTGACTAATTCTCTGGGCTACAATGACAAACCTATGGACAACACATGCTAGTGTTGGTACGTATGGTAGAAGACCCAGATGCAACATCAAACAAGTGCCAAAGAAGCGTCATTTTGTACTTTTATTTATTTCCATACAACATGGTACATTCACCACAAAATTTTAATCCTGGTTTGTGATGACCAAAATGGCCAATGTGTTTTAGAATGATTAGGCAGGTTATCTCAGTTCTTCCACTGGATATGTTTTTAATATGCACAACACATCTGTAAATGGACTGGAAAATTATGTGATTTTCATGAAAGATCTTCTATATGACATTCATCAAAACGGAAATGCATATTTCAATTTCTCTAATATAATTCTCTGTCTGGATTTTTGTCCTATGCTCCAACTCCAACATGCATGCTGACAAAAGTGAAACCTTTCCGACTTTGTCCTGACTTAAACATATTTTTTATTCACCCCCCTCAATAGATAAGACAATATATCAATATAACTTGTATAATGATGATATTGAGCGCAGTTTAGCTGGCCATGGATTCCGTTTGTGTTTCAAGATGAGGCATTGATTTTGTAGGGATTTTTCATCAGACTGTAAATGGTCTAATCATCAATAGCTAAAATTGTACCTGCTTTTCACATTTGTTATTATAAAAGCTCAAACTATCGTAATATGAGGAGGCACCACATTTTCTCCGAGAGGTCAAAATGTACAACTCTAATCAGAGGGAGAAGAAATGAGTCAGCATTTGGTGTGCCCATAAATAAGAGAAAATTCCTTATATACCATTGGATGTTACCCTATTCCTCTATTGCCATTCAAAAATTGACGTTTAATTATTTTTCACATTCTCATTTCTTGTTCCTCTTTCTTCTCCTTTCCTCTCTTCCTCTCTCTCCTCACCTGCTGTTTCCTTTTTATTTCTTCCTTCCTAGCCTGTTCTGTCTTCGAGGATGTTACCCTATTCCTCCATGGCCTTGTTCCTCTTTCTTCTCCTTTCCTCTCTTCCTCTCTCTCCTCACCTGCTGTTTCCTTTTTATTTCTTCCTTCCTAGCCTGTTCTGTCTTCAAGGTCTGCTGTACTGAGCACCGTGGATGATTACATCAAGCCAGAATACCATGAAGTTGGGGCCCATTGTCAATAGAGACTGAGGTCAAAGCCATAATGTTGGGGGGACAAATACAAAGAATGGCTGAAATTGAAGCCATGACGACGGGAAGAGCACATTGGCAGCAGTGTGAGCTTGGCAGTGCACAAATTGAGGCACGATGGCACATGAAGTCAAAGCTCCTCGTCCAAGGATTAGGCTGTCTGCGCTTGAAATCAGAACACACTGGCAACAAAATCTAAGTTCCTTCCTCTCGTTCTAAACCCAAGGTCCATGGTGGCTAACTGGCCATGACCTTGAAGGCAGTGGTTGTGTTTGGGAATGGTGTGGATGTGTCTAGCAGCAGTAGAAAGACATTTAAGTCCGTCCACTGACAACAATGCTTGGCTGCAGGGGGCTGCATCCATGGCTGCCGAAATCAAAACTTGAGGGTGGCAAAGCTTTTTTGGCTGTGGGGACGAGCTCAGTGGCAGCTGAATTTGTAATCAATGGCACATCGTTGGGGCTGGGAGAGGTGAGGGAGGCAACTAAATTACATGGGTGATTATGTGATTGGGATAGGAGAGGGAAGTCCAGCAGTTGAGCCGCTTAGAGTACCTTGTGGACCATGGTAGCGTGCCATCTGGCATGGTGGGTGAATAAGAGAGAGGAGTATTTAGTGCAGCTGGCTGTAGGTTGATATTAGTGCTAGTAGAGTAGGGTATGGTCGTTTTATTTTTTATTGGTGGCACATTGGTAATGTTTTGATACTAAAATGTACTAATGTTTCTCTTCCGCGTATTCGAGAAAAATGAAGAAGAGAGGAGAGCAGAAAGAGATTGGATGAAGATGATAAGTGGCCGTGTAAGGGCAAGAATAGGATTTTGCCAAGAAAAAAAAAACCTGACCACTAACAATGCGTCGTCCTACCAGAGTAATAAATGGACTAGGGCAAGAAAGGGTTATTAAATATGGGTCGGTGGAAAATAAGTGAACATCAAATTTTAGATGGTAAATAGGGGATTTAAGTAACACTCAATGGTACATAAGGAATTTTCTCAGTAAAAAAGGGAAGTTTACTAAATAGATATTATTACTGTTATATTTGATTTGTTTAATAACAAACATAACCATATTCTCAATTTAGGTATTAGAGCATTTTAAGCAATTTAACTGCACAATCATGTGGTATCTATGACTTGTTTTTACTATTTTACTATTTATTCTTTAGGAGTAGTTCACCTTTTTTTGTTACATTGATGATTCAGGTGGCCCCTAACACTAGATCATTTTCTCTAGATAAATCAAAATCACAGGGTGGATTGGACTCTAGGAAGGATGCATTCATCCCAAGGGATGCGAATGGTCAACCTATTGCTGCACACACTTTCACTTTTCGTGAACTTGCTGCTGCCACTAAGAACTTCAGACAAGATTGTCTATTGGGGGAGGGAGGTTTTGGCCGCGTATATAAAGGACACTTGGAGAATGGGCAGGTTTGTGTTCTGAAATATGTTTTTCGTGGTTGGGGATTTTTTGAATTCTCTATGGTTAGCTACTGTGCACTTTTGGTAATTTGCGTACTAAAACACCACATTATGGTTACTGCATTTCTTTTAACCCCCTATGTGATCTGTGGAGCATTAGGGGAGACATGTTTCCTTAAAGTCTTGATTGATGAGCTTACCAAATATGCAGGCTGTTGCAGTGAAGCAACTTGATCGCAATGGACTTCAAGGAAATAGAGAGTTTCTGGTTGAAGTCCTTATGCTTAGTCTATTGCACCATGATAACCTGGTTAACCTAATTGGATACTGTGCTGATGGGGATCAACGTCTCCTTGTATATGAGTTTATGCCATTGGGATCACTTGAGGATCATTTGCATGGTAAATTTGCTACTCTACTACACTCATGAACTCCTATTGTATTTCTATGCCTATGTCCTGTATATTCAAAGACACATGTGGCATTATACATGCAGTATCTGTCAACTCAGCTTGCAAGTACCTACATGTGTTTATTCTATCGTTGTGAGCTCGTTATAACTCACACTTCCAACAGTATAAAGTTTCTTCCAGAAAAAGGAAAAAAAACAGCAGTTTTGTGGGTTATCCTGTATTAACTCACAATTAATAAATACTAGTTAAAATAATTTGCGTCGTGAAAGTGGTTTACAAAACAGAAACCTTACATTGTTGTTACTTCAACTTTATTGTCTCCCACATATCCTGTCTCAAGTTTATATATCTAGAATACCCTATGATGTAATTATGCTCAGATACTTGTTCCATTGCTAAATCATGAAAACAAAACATTGTGTCTATAATCTGGACTTGATTTACTTAGCATTATGGTTTTTCGAAACCAACGGACTCTTATGTTTCCATAAAAGTTGGTAATATGCAACAACGATGTCTGCATCAGACTCTTAAGCGCATTGTTTGTTCATAAGACGTATTTAGTTTGTTTAAATTAATTTGCATGATTCATAAATGGCAACGTTTTGTACTTTTGTGTGTTAGATATTCCACCTGACAAGGAACCTCTCGACTGGAATACACGGATGAAGATTGCTGCTGGTGCAGCCAAGGGCTTGGAATTCTTGCATGACAAGGCAAATCCTCCTGTTATTTACAGGGATTTCAAGTCATCGAACATTCTTCTTGGTGAGGGATACCATCCAAAACTATCAGACTTTGGCCTGGCAAAACTTGGCCCTGTTGGTGACAAAACTCATGTTTCGACACGTGTTATGGGAACTTATGGCTACTGTGCCCCAGAATATGCGATGACTGGGCAGCTTACTGTTAAATCTGATGTGTATAGTTTTGGTGTTGTGTTCCTTGAACTGATTACTGGCCGCAAAGCAATCGACAACACCAAACCACTTGGAGAGCAGAACCTAGTGGCATGGGTATGTTCATCTATTGTCTAAATTTTGTCATAAGCTTGATGGTTGCCTATCGATATATTGTAGCAAATTCATTTATTTTACAATTTCTTGGATGAAGCATAGGTACTAAAACATTGTAGTTAAGGAAAAAATGAACTAAAAGATTTAAAAGTATAACTAGGATGGGAGTAAACTGTTTTTCCTAGCTTGGAAAATGAAATAATCCACTAGCCAAAAAGCTAATGTCTCAAAAGACATTTTTGGAAATTGTGCAAGGTTAGTCTTTTATTTACTTCTCAGATCATATAACCTTTTCTAACTGAACCTTGAGACTAACATTTATATCAAATGCCTCATTTGTTAATTCATATGGCATTTCCCTCGTATTTTCTGGAACGCAATCTTCGAAAGCCTTACACTGTAGCACATATATCATGCAATCTTCGAAAACTATTTCTATTCAGCTATTGTTATTGCTTATTCATCCAGAAACAGTAACTTTTCATTAGGCAGTTTGACCAGGGTCAGCCCTTCTTGGCCTTGGATTTATTGTCAGTTCCAAACCAATTTTGATTTTTTAAGAATGATTTTACATTTTTTTTACTTTTCTTATTAGCAATCATGAAAGGAGAAAGCAATTAGAGCGATGAAGAAAACCCCTAAAATTGATCATGAAGTCAAAAGTTTAAATTAAATTCAGCTTAGAATTATGATCTGGAGCTGAGGAGCTCAGCCAAGCGGGTAAACCAGCTGGTAAAGTTTGTTGATTTGACTTTATAATCTAAACCAGCTGAGCATACTTGTATAATTGTCAAGTTTACCTCAATATCGGATTCCACCTTGGTTCTGAAATCCTCTTATAATACAAGAACGGTGTCTCTTATCAAGTGAGCGTAAAGTAGTTTTTTTTTGGGGGGGAAAGTAATTATTTTATTTTGATTGTTAACACCAGTGGAATTAGGTTATTTATTATTGACCATTGACACTAGTTCTTGTGATATCTTGATCACTCCTTTATCTATACTAATTTATTACCTGACAATATATTTTCTTGCAGTTGCAGATTTAAATAAGCTTTACTTTCGATAAATATTCAGATAAACACAATTTTGGATATCTGATACCATTGATCTTATTTGCAGGCCCGTCCCCTGTTTAAAGACCGCAGGAAATTTCCTAAAATGGCTGATCCATTACTTGCGGGCCGATTTCCTATGCGGGGCCTGTATCAGGCTTTAGCAGTTGCTGCAATGTGTTTGCAGGAGCAAGCTGCCACTAGGCCTTTTATAGGAGATGTGGTCACTGCTCTTTCATATCTTGCTTCCCAGACATATGATCCAAATGCACCTGTTCAGCACAGTCGGAGCAATGCATCTACCCCTAGGGCCAGAAACCGTGTTGGTGCGAATTTTGACCAGCGTCGTCTTCACTCACCAAATCACCAACAATCTCCAGATTTAAGGAAAGAAGGCACCACAACATCAAAATATGAAGCTGAGGTTAGCAGGACTAATTCTGGCAGTGGCTCTGGTCGACGAGCTGGCTTGGACAGCATGGATGTGACAGGTTCACAGATGGGTAGTCCTGCTCACGCAGGAAGGAAGAGGGAATCATCGCGGAGTACTGATAGGCAGCGTGCAGTCGCAGAGGCCAAAACATGGGGGGAGAATTCAAGAGAAAGAAAGTGGCCAAATGCTCGTGGCAGCTTTGATAGTACAAATGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019738