Os11g0705200

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Revision as of 09:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0705200| Description = Similar to Scarecrow-like 9 (Fragment)| Version = NM_001075080.1 GI:115486808 GeneID:4351217| Length = 2215 bp| Def...")
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Gene Name

Os11g0705200

Description

Similar to Scarecrow-like 9 (Fragment)

Version

NM_001075080.1 GI:115486808 GeneID:4351217

Length

2215 bp

Definition

Oryza sativa Japonica Group Os11g0705200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:30678677..30680891

Sequence Coding Region

30678726..30680804

Expression

GEO Profiles:Os11g0705200

Genome Context

<gbrowseImage1> name=NC_008404:30678677..30680891 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:30678677..30680891 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgcgccgcagctggaggaactcgtcgacctcgagcccttctctccgtcgctcttcctcgacctgcccccgacgccgcacagcgacgaccccaacgatgacgatctcatcctccccttcatctctcgcatgctcatggaggacgacatcgacgacaagttcttctaccagtttcccgaccaccctgctctcctccacgcccagcagccctacgcccaaatcctcgacgccccatccgacgacaccaccaccaactcctccgacgactccgcctccgccaccaccaacaacacaaccaactccgccgccgccgccaacgcctcctggccctacgaccccatcgagctctctcagctgctccaatccccgccccaccccgtctccgacaaccacgacgccgacgtcggcgacaccaggagcgcgccggaagacgacaaagacctgaaacttctgttctccgccgccgacaacatggagatgctcaacatggcgttcctcaagggcagggaggaggccaacaagttggtgcccaccaacaacaccctcttcgccggcttcgacggcgcctcgctgctcaagacggagccggcggtggatgagcccacgttaatgttcggacgaagcggcggcagcggcaggggccggaagaacaggcacggcgaggaggacgacctggaggcggagaccggcaggagcagcaagctgatggtgccaccgcaagaggccaccgcggccgccagcgagatgttcgacgaaataatgttcaactggtacgaggtgatcatgaaagggatggaggagctgcgcgtcgccatggacagcgaggccgagaagaaggcccggaacggcggcggggccggccggagggcggcgcgcgcaaaggcggcggtggtcgacctacacaccctgctcatccactgcgcgcaggcggtggcgacgagcgaccggcggagcgccaccgagctgctgaagcagatcaagcagaactcgtcggcgagaggggacgcgacgcagaggctggcgtgctgcttcgccgaggggctggaggcgcggctcgccggcacggggagccaggtgtacaagtcgctcgttgcgaagtgcacgtcgacggtggacttcctcaaggcgtacaagctgttcgcggcggcctgctgcatcaagaaggtgagcttcatcttctccaacaagaccatcctggacgccgtggcggggaagcgcaagctgcacatcgtggactacggcctcagctacggattccagtggccaggtctgttcaagtgtctgtcggagagggaaggcgggccgccggaggtgaggattacgggcatcgacttcccgcagccggggttccggccagccgaccagatcgaggagacaggccggcggctgagcaactgcgcgcgccaattcggcgtgccattcaggttccaagccattgctgcaaagtgggagacggtccgccgcgaggacctccacctcgaccgagaagaagaagaagaagaagaagaagaggtgctcgtggtgaactgcctccacttcttgaacgccctgcaggacgagagcgtggttgtggacagcccgagccccagagacatggtgctcaacaacatccgcgacatgaggcctcacgtgttcgtccagtgcgtcgtcaatggcgcgtacggcgcgcccttcttcctgacgcgcttcagggagacgctcttcttctactcgtcgcagttcgacatgctggacgccaccatcccgcgcgacaacgacgagcggctgctcatcgagcgggacatattggggcgctgggccctcaacgtcatcgcctgcgagggcgcagacagggtggatcgcccggagacgtacaagcagtggctggtgcgcaaccaccgggccggcctcacgcagctgccattgcagcctcaggtggttgagcttgtgagagacaaggtcaaaaaactctatcacaaagacttcgtcatcgacgtcgatcacaattggctgctgcagggatggaaggggcggatactgtacgccatgtccacatgggtagctgatcgtgatcacaaatccctcttttag</cdnaseq>

Protein Sequence

<aaseq>MAAAAPQLEELVDLEPFSPSLFLDLPPTPHSDDPNDDDLILPFI SRMLMEDDIDDKFFYQFPDHPALLHAQQPYAQILDAPSDDTTTNSSDDSASATTNNTT NSAAAANASWPYDPIELSQLLQSPPHPVSDNHDADVGDTRSAPEDDKDLKLLFSAADN MEMLNMAFLKGREEANKLVPTNNTLFAGFDGASLLKTEPAVDEPTLMFGRSGGSGRGR KNRHGEEDDLEAETGRSSKLMVPPQEATAAASEMFDEIMFNWYEVIMKGMEELRVAMD SEAEKKARNGGGAGRRAARAKAAVVDLHTLLIHCAQAVATSDRRSATELLKQIKQNSS ARGDATQRLACCFAEGLEARLAGTGSQVYKSLVAKCTSTVDFLKAYKLFAAACCIKKV SFIFSNKTILDAVAGKRKLHIVDYGLSYGFQWPGLFKCLSEREGGPPEVRITGIDFPQ PGFRPADQIEETGRRLSNCARQFGVPFRFQAIAAKWETVRREDLHLDREEEEEEEEEV LVVNCLHFLNALQDESVVVDSPSPRDMVLNNIRDMRPHVFVQCVVNGAYGAPFFLTRF RETLFFYSSQFDMLDATIPRDNDERLLIERDILGRWALNVIACEGADRVDRPETYKQW LVRNHRAGLTQLPLQPQVVELVRDKVKKLYHKDFVIDVDHNWLLQGWKGRILYAMSTW VADRDHKSLF</aaseq>

Gene Sequence

<dnaseqindica>50..2128#ccacactaacatccactattatcggatcgcaagaatccacagcccggccatggccgccgccgcgccgcagctggaggaactcgtcgacctcgagcccttctctccgtcgctcttcctcgacctgcccccgacgccgcacagcgacgaccccaacgatgacgatctcatcctccccttcatctctcgcatgctcatggaggacgacatcgacgacaagttcttctaccagtttcccgaccaccctgctctcctccacgcccagcagccctacgcccaaatcctcgacgccccatccgacgacaccaccaccaactcctccgacgactccgcctccgccaccaccaacaacacaaccaactccgccgccgccgccaacgcctcctggccctacgaccccatcgagctctctcagctgctccaatccccgccccaccccgtctccgacaaccacgacgccgacgtcggcgacaccaggagcgcgccggaagacgacaaagacctgaaacttctgttctccgccgccgacaacatggagatgctcaacatggcgttcctcaagggcagggaggaggccaacaagttggtgcccaccaacaacaccctcttcgccggcttcgacggcgcctcgctgctcaagacggagccggcggtggatgagcccacgttaatgttcggacgaagcggcggcagcggcaggggccggaagaacaggcacggcgaggaggacgacctggaggcggagaccggcaggagcagcaagctgatggtgccaccgcaagaggccaccgcggccgccagcgagatgttcgacgaaataatgttcaactggtacgaggtgatcatgaaagggatggaggagctgcgcgtcgccatggacagcgaggccgagaagaaggcccggaacggcggcggggccggccggagggcggcgcgcgcaaaggcggcggtggtcgacctacacaccctgctcatccactgcgcgcaggcggtggcgacgagcgaccggcggagcgccaccgagctgctgaagcagatcaagcagaactcgtcggcgagaggggacgcgacgcagaggctggcgtgctgcttcgccgaggggctggaggcgcggctcgccggcacggggagccaggtgtacaagtcgctcgttgcgaagtgcacgtcgacggtggacttcctcaaggcgtacaagctgttcgcggcggcctgctgcatcaagaaggtgagcttcatcttctccaacaagaccatcctggacgccgtggcggggaagcgcaagctgcacatcgtggactacggcctcagctacggattccagtggccaggtctgttcaagtgtctgtcggagagggaaggcgggccgccggaggtgaggattacgggcatcgacttcccgcagccggggttccggccagccgaccagatcgaggagacaggccggcggctgagcaactgcgcgcgccaattcggcgtgccattcaggttccaagccattgctgcaaagtgggagacggtccgccgcgaggacctccacctcgaccgagaagaagaagaagaagaagaagaagaggtgctcgtggtgaactgcctccacttcttgaacgccctgcaggacgagagcgtggttgtggacagcccgagccccagagacatggtgctcaacaacatccgcgacatgaggcctcacgtgttcgtccagtgcgtcgtcaatggcgcgtacggcgcgcccttcttcctgacgcgcttcagggagacgctcttcttctactcgtcgcagttcgacatgctggacgccaccatcccgcgcgacaacgacgagcggctgctcatcgagcgggacatattggggcgctgggccctcaacgtcatcgcctgcgagggcgcagacagggtggatcgcccggagacgtacaagcagtggctggtgcgcaaccaccgggccggcctcacgcagctgccattgcagcctcaggtggttgagcttgtgagagacaaggtcaaaaaactctatcacaaagacttcgtcatcgacgtcgatcacaattggctgctgcagggatggaaggggcggatactgtacgccatgtccacatgggtagctgatcgtgatcacaaatccctcttttagttcaagatttaattatctgcttcaattacttacaaattgagaactagatatatactcctacatgatataatatcttcatttgcaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0705200, RefSeq:Os11g0705200