BGIOSGA019786

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Revision as of 02:57, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019786| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019786, complete gene.| tag = OsI_198...")
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Gene Name

BGIOSGA019786

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019786, complete gene.

LocusTag

OsI_19808

Ensembl Transcript ID

BGIOSGA019786-TA

Ensembl Protein ID

BGIOSGA019786-PA

Length

6635

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19904142..19910776

Sequence Coding Region

19904142..19904300,19904433..19904496,19905067..19905125,19905246..19905321,19905439..19905510
,19905678..19905765,19905887..19906145,19907040..19907155,19907439..19907659
,19910010..19910038,19910119..19910218,19910369..19910453,19910548..19910776

Genome Context

<gbrowseImage1> name=IndicaChromosome05:19904142..19910776 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:19904142..19910776 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACCAGGCGTCCTCTGCATCCGCTGCTCCTCTTCTCCTCGCCATGGCTGCTGCTGCTGCTACTACTTGTTGTTCAAGGCGTGAGCTCGCTGCAGTTCACGCGGGAGGATTTCCCCGACGGATTCACGTTTGGAGCCGGGACTGCGGCTTTCCAGTATGAGGGTGCAGCTGCAGAGGATGGGAGGACACCAAGCATCTGGGACACCTACGCACACTCATGGAGGAATCCAGGAGGCGAAACAGGTGATGTGGCATGTGATGGCTATCACAAGTACAAGGAAGATGTAATGCTAATGAATGAGACAGGCCTGGAGGCTTATAGGTTCACCATTTCTTGGTCGAGGCTCATTCCGAGTGGGAGAGGAGCGGTTAATCCGAAAGGGCTGCAGTTTTACAACAGTATGATAAATGAGCTAGTAAAAGCAGGTATTCAGATTCATGCTGTTCTGTACCATATAGATCTTCCACAGAGCCTTCAAGACGAGTACGGTGGGTGGGTTAGCCCCAAAGTTGTGGATGACTTCGCAGCATACGCTGATGTGTGCTTCCACGAGTTCGGTGACAGAGTCGCGCATTGGACAACTTCAATTGAGCCAAATGTCATGGCTCAATCTGGCTATGACGATGGGTATCTCCCTCCAAATCGTTGCTCATATCCGTTTGGCAGAAGCAACTGCACACTTGGAAATTCCACGGTTGAGCCATACTTGTTTATACACCACACCCTGCTAGCTCATGCTTCAGCTGTTAGACTTTACAGGGAGAAGTACCAAGCTGCACAGAAGGGCGTTGTCGGCATGAACATATACTCCATGTGGTTCTATCCACTCTCAGAGTCAGCTGAAGATATTGCTGCCACTGAAAGAGTAAAGGATTTCATGTATGGATGGATCTTGCATCCTTTGGTGTTCGGAGATTACCCAGAGACCATGAAGAAGGCCGCCGGTTCCCGTCTTCCATTATTCTCTGACTACGAATCTGAGCTGGTTACTAATGCGTTCGACTTCATCGGGTTGAATCATTATACCTCAAATTATGTGAGCGATAATAATAACGCAGTAAAGGCGCCGCTACAGGACGTCACTGATGATATTTCTTCCTTGTTCTGGGCCTGCAAGAATAGCACACCTACTCGAGAGTTTCTACCAGGGACCTCATTAGATCCTCGGGGGCTAGAGCTCGCGCTTGAATACCTTCAGGAAAAGTATGGAAATTTGCTGTTTTATATCCAGGAAAATGGTAGTGGATCAAATGCAACCCTGGATGATGTGGGGAGGATTGACTGCTTGACACAATACATTGCAGCCACGCTGCGATCCATCAGGAATGGTGCAAACGTGAAGGGATACTGCGTGTGGTCATTCATGGATCAGTACGAGATGTTTGGCGATTACAAGGCGCATTTCGGCATTGTTGCCGTCGATTTTGGCAGCGAAGAACTGACAAGGCAGCCCAGGCGATCTGCTAGATGGTACTCGGACTTCTTGAAGAATAGTGCTGTCATCAAGGTGGATGATGGTCCTGTCTCCACAGCCTTTCATGCTCAGCTTTGA</cdnaseq>

Protein Sequence

<aaseq>METRRPLHPLLLFSSPWLLLLLLLVVQGVSSLQFTREDFPDGFTFGAGTAAFQYEGAAAEDGRTPSIWDTYAHSWRNPGGETGDVACDGYHKYKEDVMLMNETGLEAYRFTISWSRLIPSGRGAVNPKGLQFYNSMINELVKAGIQIHAVLYHIDLPQSLQDEYGGWVSPKVVDDFAAYADVCFHEFGDRVAHWTTSIEPNVMAQSGYDDGYLPPNRCSYPFGRSNCTLGNSTVEPYLFIHHTLLAHASAVRLYREKYQAAQKGVVGMNIYSMWFYPLSESAEDIAATERVKDFMYGWILHPLVFGDYPETMKKAAGSRLPLFSDYESELVTNAFDFIGLNHYTSNYVSDNNNAVKAPLQDVTDDISSLFWACKNSTPTREFLPGTSLDPRGLELALEYLQEKYGNLLFYIQENGSGSNATLDDVGRIDCLTQYIAATLRSIRNGANVKGYCVWSFMDQYEMFGDYKAHFGIVAVDFGSEELTRQPRRSARWYSDFLKNSAVIKVDDGPVSTAFHAQL</aaseq>

Gene Sequence

<dnaseqindica>1..159#292..355#926..984#1105..1180#1298..1369#1537..1624#1746..2004#2899..3014#3298..3518#5869..5897#5978..6077#6228..6312#6407..6635#ATGGAGACCAGGCGTCCTCTGCATCCGCTGCTCCTCTTCTCCTCGCCATGGCTGCTGCTGCTGCTACTACTTGTTGTTCAAGGCGTGAGCTCGCTGCAGTTCACGCGGGAGGATTTCCCCGACGGATTCACGTTTGGAGCCGGGACTGCGGCTTTCCAGGTATCCTGATCTGAGTTGTGTCAGCTTGATCTTTTCCTGCTACTGGTTGCTCTGCTCCTACCTGCAGATTCAGTTCAGAGCATAAATTGAATTTTGCATTTGTGAATTATGGTTGGGTTTTGGATTTTGCAGTATGAGGGTGCAGCTGCAGAGGATGGGAGGACACCAAGCATCTGGGACACCTACGCACACTCATGTACTGTACTCCCTCTCAACTTGGATTGGCTTGATTCCTAATTGCTTCCTACTCCCTCCGTTTCACAATGTAAGTCATTCTAATATTTCCCACATTCATATTAATATTAATGAATCTAGACATATATATTTATTTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTACATTGTGAAACGAAGTAAGTAATTAACTAATACTTGTTGCAACAAGAGGAGACCAATTTTTTTGCACACAATAGGTAATGGTTGTTTTGCTATGCTAGTTTGAAGTTCACTGGGTTCAGCCGAGAGAAAGGGGAAATGCCACATTTCTTTGTTTTTTTGTCTTCAGATAATGGATAAACCGGTCACTATGTCAAAGGTACACAAAGGCACAAAGCCCAACGGAGCATTATTGCTAAGTTTGTTTGAGAGATCTGTACATGATAAACTATAGCGGCCTTTTAACCTCTGCACTTAAGTTGGCGGGAAAAAAAATGTGTTTTTAAACATATGGTTGTTCTTGTTCTTTTTACCTGTCTCTGCCAATTTGACCTGTGATATGCTGAATCAGGGAGGAATCCAGGAGGCGAAACAGGTGATGTGGCATGTGATGGCTATCACAAGTACAAGGTATAGTGTTTGGATCAGAGATAAAATCATCAAATTTCAGATTAATCATCCATGATCTTGCATTGTTCTGAGAAATTTTCTTTTCATCTCTGTTAATTCATTGTGGGCTGATCTATGTAGGAAGATGTAATGCTAATGAATGAGACAGGCCTGGAGGCTTATAGGTTCACCATTTCTTGGTCGAGGCTCATTCCGAGTAGGACAACTACATATCACCTACATATTGATATTTATCAATTTATCATTAGTGAAGATGCTTTCTTGTCCACACATGCATGATGCATGTTCTCATTTTAAGTTTGGATCAAACTAGGTGGGAGAGGAGCGGTTAATCCGAAAGGGCTGCAGTTTTACAACAGTATGATAAATGAGCTAGTAAAAGCAGGTAAGTTGACCTATCCCAATTCTGAAAAAATAATTGTATTCATTAATGCACATCACTCTTAATTTTGCATTAGTTGTTACTCACCAAATATCTTCTTAACAAAAATGATGCATGACTGGTGACCTCTGATTCTGAGATTAGGCTTTCTGCTCCTGATTCATGAATAGGTATTCAGATTCATGCTGTTCTGTACCATATAGATCTTCCACAGAGCCTTCAAGACGAGTACGGTGGGTGGGTTAGCCCCAAAGTTGTGTAAGCATTAAGCAGTAATTTCCCTTCATGCCATGCTGATAGTTATGATCATCAAGAATGCCAAGAACCATTACAAAAGTTGATCCTCACAAGGTTTGCTTTCCCTGCATTTGTGTTGCAGGGATGACTTCGCAGCATACGCTGATGTGTGCTTCCACGAGTTCGGTGACAGAGTCGCGCATTGGACAACTTCAATTGAGCCAAATGTCATGGCTCAATCTGGCTATGACGATGGGTATCTCCCTCCAAATCGTTGCTCATATCCGTTTGGCAGAAGCAACTGCACACTTGGAAATTCCACGGTTGAGCCATACTTGTTTATACACCACACCCTGCTAGCTCATGCTTCAGCTGTTAGACTTTACAGGGAGAAGTACCAAGTGAGTGTGCATTATCACTAGAAAATTTCTTTTTCTTCTGAAAGACCTGTATACTGTCTGTTCTTAATTATTCTTATGAAGTCAAGAAAATCACGTAGGTTATCTGCTCATCGTTCCATTAAGCAAGAAAAATGAATTTTTGACGCAAGAATGCTCTACCTTATAGTCATTTCATTTATAGAAATGAGGTGTAGGGTTACATAATTATTAGAGAAGAGAGAGGTAGGGAGAAGAAGGAGTAAAAAAGAGTGAAGGGGGAGAAGAGTTACAGAGGTTAAGGAAGAAATAAAAAAAACAGGGAAAAGAAAGAATTTACATAAGTGTAAACATTAGGCTGTCGTTTAGGACAGTCTTTCACACCATGATCGAATTTTGAGTCTAGTGTCTTCGTTACTTCGTACACTCCAGAGATTTAGGGAATCACGGATTTGTTGTATTATATCTTGGGTATTGTCCACCCGTCTGCCAAAAGTCATGTTGTTGCGTGATTTCCACAGAGAGTAAGCGCAGGCTGCAAACCAGATTGGTATCACCCTTTGTGTTGGTTGGTTCCTGTCAATGGCTGCTTGGATGAAATCAGAGATTGTTTCGGCTCTGTTTGCGAATTGCAGGAGTCCTAGTTTTCTCCAGAGATTGTCGGCATTTTTGCATCTTAGGATGATGTGATCAGCTGTCTCAAGAGCAGGGCAAACAGGGCAGTGGGGGTCATCACTCCACTTTTTGTTGACCATATTGGCTTTAGTATTTAACCTATTCTTGAAAGCGAGCCATAAGAATACTCTGCAATTCTGTGGTATCGTGTAGACCCATATAAATTCAGCTGGCTTCCAAATGAATATACTCAAGAGCAGAAAAATGAATTTTATTTCTCTGTTTTTGGTTTCATTGTTTCAGGCTGCACAGAAGGGCGTTGTCGGCATGAACATATACTCCATGTGGTTCTATCCACTCTCAGAGTCAGCTGAAGATATTGCTGCCACTGAAAGAGTAAAGGATTTCATGTATGGATGGTATGTCATGTTATATCGTATTTCTGAAGTATTTACTATAGCAAGAATGAAACAAATACTTTTTTCGTCCCATAAAAAACCCAATCTTTGGTTGTAAGCTTGTTATACCAGCCACTACAGCGAACTCTGCTGTCCTTTCATGCTTTGAGTTTTTCTTTTGAAAACAACGTTTGCACTCTCATAGGTTCCTAGTAGACTTTTTTTTTTCTTTTTTCTTTTTTTTTGCGGGGAGGTTCCTAGTAGACTCTGAATCCTGACACAGTTAAATCCAACCAAATTGCAGGATCTTGCATCCTTTGGTGTTCGGAGATTACCCAGAGACCATGAAGAAGGCCGCCGGTTCCCGTCTTCCATTATTCTCTGACTACGAATCTGAGCTGGTTACTAATGCGTTCGACTTCATCGGGTTGAATCATTATACCTCAAATTATGTGAGCGATAATAATAACGCAGTAAAGGCGCCGCTACAGGACGTCACTGATGATATTTCTTCCTTGTTCTGGGGTAGGAAATTTCATACTGATATGCTTTTTATTATTCACTAGGAAGGAAGCCCGCGCATACGCGCGGACATGTTGTTTAATCTTGTTTGAAATTTTATTACAAATATTTATGTGTGGATGATATTTTTAAATATTTTTTTACTCTATTTTAAACGTATGTTCGTTAATAACTGGTTTGGGCGTATTACTTGAAATTGTATATCTTCAAATTTATTAGAAAAAAAATGTGTCACAATAATGAAGCTACTTGTATTACGTGTGATTCTTTTTAAAAATTTTTGGAGTTTCCAAACTTTATATAACATTTTTTTATTTTATATGCCATAGACGACTTTAATTAACATTTTAATTTTATTATATATTAATGAAACATATTTTCTATTAAAAAATATAGCTAATGATACTACTTCATCTAATCGAAGATAGACTTATATTACTTGTATTCCCTCTTTCACATAAATCGAAGGAGTTAAATTTTATCCCAAAACAATAAAAGAATTTATACGTAACCGTATCATATTTTGACAAATACTACCACGTTAATCTCCAAAGTACTGTATCATATTTTGATAAATATCTATAATATCTATAGTGTAGTGCATGTTAGTTCAGAGTGTTCAGTTTGTTTTCAACACCTATTGTTTCTAATCATATGAGACGCCACTGATAATTTAGAGAATACACATGTACATTTAAATCAGCCTTGTGTATTCATCAAGTGCTTTTTACACCTAAAATATGATGTGAAATTATTATCATAACATTAATTATTACATGTCGGCTCCATATTTATAATGTATTTAGGGCTATTGATATTTAGTAGTTTATTTATTTAAAGGAATACAACCGGATCACAAATTGGATATATAATTTTAAAATAATTTAAAAGATAAAATGCTTAAAAGCATTGATTGAGTATTTTATATTTACATTTCGTAAATTTGAAGATTATTATATTTTATCCTTAAATTGTAGAAAATTATTTTTAAGGACTGCCGATTTTTTTGGCTTTATCATAAGTACGTTTTCTGTTCTTCCAGCAAACAATATGTAAGGAATATTATTTTTTTCAATCATATGTACATACGGAGTACTTTTTCCGGTCAACTGTTACATATTTCTCATGTATCCGTATATAGGAGAAATGTATTATTTTTAAATAATTAATCTAATCTAATGGTGTAAAATGAAGCAACTAAATTGTGTTGTTTTTATTTTTACAAATGTAGATTTAAATTAGCGTTGTGTATTTGTCAAGACACCCTAAAATATGATGTGAAATAAAAAAATTATCATAGCATTAAATATTATATATATCAACCTCGTATGTTAAGATAGAACGAATAAAGATCATTGATGGGATATTTCATATTTATAATATAAATTTAGTTTAACTATGTATATTATTTATGTAAATTTGTAGAGTAATATATTTATCTTTAAATAGTATATAATACTATTTCATATAAATATGACCATCGATCTTTTCCGAATGATACACATTTTTTTTGTTTTATTGTTTTTATAGTAAGGGGTTTTGAAAATACTATTTCAGAAGACTACCATGTGTAGACTTTTCTTTGTTCCGATGATAGTAGGTAAACTTCATTTCTTTTTCCAAGTCGTATGTACGTACGGACTACTTATGTTTTTTTAGCCTACCAGTTATATAGCTTTCCCGTATACATACACAGAGTAATAAGGTATTAGTTTTTAAAATAAAATATATCTAATCTAATGGTCTAAAATATTAGGTTCACCAATTTAAGTGAAAATTGACGGTGATATTTGCTTAAATTTAAATAGTAGAAAGTTTGATTTTAAAGATAATCGATTTTTTAATGGTCCTACGTATGTTATGTTCGCTTTATTTTTTTTATAATAAGTCTGTGGGTAGTTTCTTTTTCTTTCGATAAACAGTAGGTAAGATTTATTGCTTTTTAGTCTTACGTATATGAACGTACCTATGGAGTACTTGTGTTTTTGTTTTCTTTTTCTGGTGAACAGTAAGATAAACGGCAATAAGATTCATTGTTTTTTAAGTCTCACGTACGTACGTACCTATGGAGTACTTGTGTATTTTGTTTTCTTTTTCCGGTGAATAGTTTCCTTTTAAATAAAATACATCTAATCTAATCTAATAGTCTAAATTATCCAGTCCACCGATTTAAGTGAAAATCAACGGTGAGATTAGGCATTGCCACGTGGCGGTCTATGAGCGTTTGTAAAAATGCCACGTGGTGGCTTGAGAGTATTTATAGGAAGTTTAATGAACTTTTAGTAGATAGATATATTCTTAAAATTTTATGAAGCTCGCTCATTTTATTCATGTGTGCTTTTTTTTTTGGCAGCCTGCAAGAATAGCACACCTACTCGAGAGGTAATAAACGACAACACTGTCTCTGAACTGAAACTATTGAACTTTTCATAACATGGTTTTGCTTGTTACTCTTGAGGCAGTTTCTACCAGGGACCTCATTAGATCCTCGGGGGCTAGAGCTCGCGCTTGAATACCTTCAGGAAAAGTATGGAAATTTGCTGTTTTATATCCAGGAAAATGGTTAGTAGTCCTACTTGTAGCACTCAATTAGTCTCCAATGTTAACTTTAAGGATCTCTTTTTACAAAAGTAAGTAAATATATAAATAAGAGTTCTGAAATATAACTTCCAACTCACATTCTGTCATCAATTTTACTTGGCATTGTATCAGGTAGTGGATCAAATGCAACCCTGGATGATGTGGGGAGGATTGACTGCTTGACACAATACATTGCAGCCACGCTGCGATCCATCAGGTTCTTAAGAGTTTTCTACTGAAAATCACAAGATCAAACTCTTGGATCTTATTGGTTTGAATGACTGACCGACCGACCGATCGATCGATCGCAGGAATGGTGCAAACGTGAAGGGATACTGCGTGTGGTCATTCATGGATCAGTACGAGATGTTTGGCGATTACAAGGCGCATTTCGGCATTGTTGCCGTCGATTTTGGCAGCGAAGAACTGACAAGGCAGCCCAGGCGATCTGCTAGATGGTACTCGGACTTCTTGAAGAATAGTGCTGTCATCAAGGTGGATGATGGTCCTGTCTCCACAGCCTTTCATGCTCAGCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019786