BGIOSGA019787

From RiceWiki
Revision as of 02:57, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019787| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019787, complete gene.| tag = OsI_198...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019787

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019787, complete gene.

LocusTag

OsI_19809

Ensembl Transcript ID

BGIOSGA019787-TA

Ensembl Protein ID

BGIOSGA019787-PA

Length

4369

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19913464..19917832

Sequence Coding Region

19913464..19913619,19913826..19913889,19914569..19914627,19914730..19914801,19914920..19914995
,19915126..19915197,19915353..19915440,19915559..19915814,19915913..19916028
,19916706..19916926,19917028..19917102,19917157..19917246,19917360..19917447
,19917595..19917832

Genome Context

<gbrowseImage1> name=IndicaChromosome05:19913464..19917832 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:19913464..19917832 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGGCGTCCTCTGCATCTGCATCTCCTCCTCCTCTTCTTCTCGGCATGGCTGATGCTGCTGCCGCTGCTGCAAGGTGTAAGCTCGCTGCAGTTCAGGCGAGACGACTTCCCCGATGGCTTCGCGTTCGGAGCCGGGACTGCGGCTTACCAGTATGAGGGCGCAGCTGCTGAGGATGGGAGGACACCGAGCATCTGGGATACCTACACACATTCAGAGATGTACATGATAAATTATGACAAGTTATATTATGCTGCACATAAGAATGCAGAAAATTCTGCTGCATCAGGGAGGCATCCAGAAGATGGAACAGGTGACGTAGCTTCTGATGGCTATCATAAGTACAAGGAAGATGTCAAGCTAATGACTGAGATTGGCCTAGAGGCTTATCGTTTCACCATTTCTTGGTCAAGACTTATCCCAAGTGGGAGAGGAGCGGTTAATCCAAAAGGGTTGCAGTTTTACAACAATATGATAAATGAACTAGTCAAAGCAGGTATTCAGATACAAGTTGTACTATATCACAGTGACCTCCCTCAGAGCCTTCAAGACGAGTATGGTGGGTGGATTAACCCCAAAATTGTTGATGACTTCACAGCATATGCTGATGTGTGCTTCCGAGAGTTCGGCGACAGAGTTGCGCATTGGACAACTGTACTTGAGCCAAATGTCATGGCTCAAGGTTGCTATGACACTGGGACTCTTCCTCCTAACCATTGCTCATATCCATTTGGCAGCAATTGTACAGGTGGAAATTCCACGGTTGAGCCATACTTGTTTATACACCATAACCTGCTAGCTCATGCTTCAGCTGTTAGACTTTACAGGGAGAAGTACCAAGTTGCACAGAAGGGCATTGTTGGCATAAATATATACTCCTTGTGGTTCTACCCACTCACAGATTCAGCTGAAGATATTGGTGCCACTGAAAGAGCAAAACAGTTCATGTATGGCTGGATCTTGCATCCTTTGGTGTTTGGAGATTACCCAGAGACCATTAAGAAGGTTGTCGGTTCCCGCCTTCCGTTCTTCTCTAACCATGAATCTGAGCTGGTTACTAACGCTTTCGACTTCGTTGGATTAAATCACTATAGCTCAGTTTACACGAGCAATAATAATAACGTAGTAAAGGCACCTTTACAAGACTTGACTGCCGACATTGCTACTTTGTTCAGAGCCACCAAGAATGACACACCTACTCCAGAGGTGATCACCGATAGTATTGTCTCTGCTGAAAACTACAAAACTTATGGAAACACTGTAGATCCTCAAGGGCTGGAGAATGCACTTGAATATATTCGAGAAAACTATGGAAATTTGACGATTTATATTCAGGAAAATGGCAGTGGAGCACCAGACGGAACCCTGGATGATGTGGAGAGGATCAACTATTTGCAAAAATACATAGCAGCCACACTGAAAGCCATCAGGAATGGTGCGAATGTGAAGGGATACTCCATGTGGTCATTCATAGATATTTACGAGATATTTGGTGGGTATAACAGTTGGCATTATGGACTTGTTGCTGTCGATTTCGGCAGCACAGAACGGAGAAGGCAGCCGAGACGCTCTGCTAGCTGGTACTCAGACTTCTTGAAGAACAATGCTCCCATCAGGGTGGAGATGGCTCCTTTGTCTCTGCAGCCTCTCATGCTCAACTCTGAATGA</cdnaseq>

Protein Sequence

<aaseq>MERRPLHLHLLLLFFSAWLMLLPLLQGVSSLQFRRDDFPDGFAFGAGTAAYQYEGAAAEDGRTPSIWDTYTHSEMYMINYDKLYYAAHKNAENSAASGRHPEDGTGDVASDGYHKYKEDVKLMTEIGLEAYRFTISWSRLIPSGRGAVNPKGLQFYNNMINELVKAGIQIQVVLYHSDLPQSLQDEYGGWINPKIVDDFTAYADVCFREFGDRVAHWTTVLEPNVMAQGCYDTGTLPPNHCSYPFGSNCTGGNSTVEPYLFIHHNLLAHASAVRLYREKYQVAQKGIVGINIYSLWFYPLTDSAEDIGATERAKQFMYGWILHPLVFGDYPETIKKVVGSRLPFFSNHESELVTNAFDFVGLNHYSSVYTSNNNNVVKAPLQDLTADIATLFRATKNDTPTPEVITDSIVSAENYKTYGNTVDPQGLENALEYIRENYGNLTIYIQENGSGAPDGTLDDVERINYLQKYIAATLKAIRNGANVKGYSMWSFIDIYEIFGGYNSWHYGLVAVDFGSTERRRQPRRSASWYSDFLKNNAPIRVEMAPLSLQPLMLNSE</aaseq>

Gene Sequence

<dnaseqindica>1..156#363..426#1106..1164#1267..1338#1457..1532#1663..1734#1890..1977#2096..2351#2450..2565#3243..3463#3565..3639#3694..3783#3897..3984#4132..4369#ATGGAGAGGCGTCCTCTGCATCTGCATCTCCTCCTCCTCTTCTTCTCGGCATGGCTGATGCTGCTGCCGCTGCTGCAAGGTGTAAGCTCGCTGCAGTTCAGGCGAGACGACTTCCCCGATGGCTTCGCGTTCGGAGCCGGGACTGCGGCTTACCAGGTAATATGTGTATGTATGTATAGTAGAGGAGAGATGATTCTGAACTTCTCTGAATTTTCTGTCCTGATTCTGGATTTCAATGGAGCGTCTTGCTCTTGCTACTAGCCACCTGTTGTTTGCTTCCTGACTGATTCAGAGAACGTACGAGCGAGGACAGGGTTTGACATGCGTTTCTGAATACTGGTTTTTGGTTTTGGATTTTGCAGTATGAGGGCGCAGCTGCTGAGGATGGGAGGACACCGAGCATCTGGGATACCTACACACATTCAGGTCTCTCTCTATCTCTATCTCTATCTCTGAATTTGTATTGGATAATTTTCAGCACACTGATAATGCTGCGTTGCTATGCTAGTTTTATTTTTTCGTCGTATAATCAGGGTTAGCAATCTCGAAATTTTGATTTTTGCCGGGGGTGGCCGCAAGAACTGAAATCTCCAAAATTTCTGTACTTTTTTGGCCGAAATGTTTTGAAACTTTGATGAATTTTGAATGAATTTGAATAAAATTCGACCAAATTAAAAAAAATTGGAAAAAAACTGAAATTTTCTGGCTAGATATGTGCTTGCCGGTGGGGCCGAAATGACCTAAATTTCAGAAATTATCACTGCATATAATTAGATTGCAGTTCACGGGATTCGGCGCAGAGAGGGGCAAAATTTCATTCACTTTGACTACAATGTGAAATTCATTTCTTCAGGATGCAAGTGGGCAAGCCCACTACCCACGGTCTAGTTTCGAAATAAGTTTTTTTAAAAAGGCCAATTTGTGAAAAAAAAAGGCGCACAAAAACGTGCTTGCTAGTTTATTTCTCACATGGTAGTACAAATTTTAGAAGAAAAAATAAATTATAAGTGAGATAAGCGGGTAAAAAATTCTGCTTGCCCACCCCGCTTGCATCCCTACATTTCTTTTTTGGATAGCTCAACTAAGTTTTGTTTTTTTTTTATAGAGATGTACATGATAAATTATGACAAGTTATATTATGCTGCACATAAGAATGCAGAAAATGTGTGTTTTTTTTAAAAAATCATGGTTTGTTTTTTTATTTATCCATGTCAAGGTACTTCCATTATTATTTTTTAAAAAAAAGAATATGAATTTGACATGTAGTCTGCTGCATCAGGGAGGCATCCAGAAGATGGAACAGGTGACGTAGCTTCTGATGGCTATCATAAGTACAAGGTATTGTTTTTGGATTAGAGATAACAAGAACAAATGTCAGTTTGATCGGCTATTGTTCTTAATGCTCTGAGAATTTTCTTTTCAGTTTTGACCTCTGTTCATTGTGGGGCTTTTGTAGGAAGATGTCAAGCTAATGACTGAGATTGGCCTAGAGGCTTATCGTTTCACCATTTCTTGGTCAAGACTTATCCCAAGTATGGCAATTACATATCATTATCAATCTCCCATTCATAATACCGGATCATTAGTGACAATGTCATCTTCACACATAATTCTTTGTTAGCCTCCCCACCCAAGTTTTGATTTTTCTTTTTCTGGACAAAGGTGGGAGAGGAGCGGTTAATCCAAAAGGGTTGCAGTTTTACAACAATATGATAAATGAACTAGTCAAAGCAGGTAACTATACTTTCCCAATTCTGAAAAAAAGTGCATTCTTTAATGCACACTCTTATATAATCAGTTATTAACAACAATTTAGGAGAGATGATCTTAACAAAAATGATGACTAGCACCTCTGAGATTAGCCCTTTTTTTTCTCCCAATTCATGAAGGTATTCAGATACAAGTTGTACTATATCACAGTGACCTCCCTCAGAGCCTTCAAGACGAGTATGGTGGGTGGATTAACCCCAAAATTGTGTAAGCACTAAGCAGTAATTTCCTTTCATGCCATTCTGATAAGATTACCAAGAATGACAGGAATCATCAGAAATTTTTATCCTCGCTTGCTTTACCTTCCTCTGCATACGTGTTTCAGTGATGACTTCACAGCATATGCTGATGTGTGCTTCCGAGAGTTCGGCGACAGAGTTGCGCATTGGACAACTGTACTTGAGCCAAATGTCATGGCTCAAGGTTGCTATGACACTGGGACTCTTCCTCCTAACCATTGCTCATATCCATTTGGCAGCAATTGTACAGGTGGAAATTCCACGGTTGAGCCATACTTGTTTATACACCATAACCTGCTAGCTCATGCTTCAGCTGTTAGACTTTACAGGGAGAAGTACCAAGTGAGTGTGCATTACCATTTGAAAGTTTTGTCCTCTTAATTGTTTTTATGGAGCCAAGAAAATGAATTTTGTTGCTATGTTTTTTTCCACTGTTTTAGGTTGCACAGAAGGGCATTGTTGGCATAAATATATACTCCTTGTGGTTCTACCCACTCACAGATTCAGCTGAAGATATTGGTGCCACTGAAAGAGCAAAACAGTTCATGTATGGCTGGTATGTCATATTGTATCGTAGTATTTCTCATTGTATCACAATAGAAAGAATAAAAAAAAAACTCTATACTCCGCAAAAGGAAAAATAGCAAGAAAAAAAAAGATTTGACAAATTAATTTCGTTGGTGTGTTGTTGCCAGGTCCGACCTTATTTCTTGGGTATATAGTATCAAGGTGTTTCTGTCATTTGAAATAATTTAGAGCTGAGAGGATATCCAATGCAATTATCTTTTGTGGTGCACTCATGCAATGTTTTTTTTTGGTTTGGCACCAAATAAGCATCATTTAAGAAAAAAAACTATATTTAATCAGTTTACCAGCAACCTACAAACTATATGTACTCCTCCCTTATCTAAAAAACTTTACTTTAGCTGTAAAATTTCAAGCCAATTCTTTGTTTACAGCAAAAGGATGTTATGTTAAGAGTAAAAAGATGATAGAATCCGACGAATGTAAAGTAAAATAGGGAAAAGAAAAAAAGACAATGCTACTCTCCATATTCATTTTCTTCTAGTTTCTATTTTAATGAAATTACATACAGATTTTGGGTTGCAAGTTTGTAACTGACCATTGCAGACAACCACAGTTACTTCATCCTTGTTTTTCTTTTCAAAACAGCGGTGAATCCTCATCGTTGACTCTGAATCTTGATATGACAAAATCTGACCAAATTTGCAGGATCTTGCATCCTTTGGTGTTTGGAGATTACCCAGAGACCATTAAGAAGGTTGTCGGTTCCCGCCTTCCGTTCTTCTCTAACCATGAATCTGAGCTGGTTACTAACGCTTTCGACTTCGTTGGATTAAATCACTATAGCTCAGTTTACACGAGCAATAATAATAACGTAGTAAAGGCACCTTTACAAGACTTGACTGCCGACATTGCTACTTTGTTCAGAGGTTCAAAATTCGTACAGATTTGCTTTTATTGTGTTTTTTTTTTTAAAAAAAAAAGTTTATGAAGTTTATTTATTTTATGTATATATGTTTTTTTTTGGCAGCCACCAAGAATGACACACCTACTCCAGAGGTGATCACCGATAGTATTGTCTCTGCTGAAAACTACAAAACTTATGGTAACATCCATAGACTGTAAAAATGGTTTTGCTTGGTTTGTCAGTTTCTACCAGGAAACACTGTAGATCCTCAAGGGCTGGAGAATGCACTTGAATATATTCGAGAAAACTATGGAAATTTGACGATTTATATTCAGGAAAATGGTCAGTAGTCCTTCAATAATCTGTATGGCATAATCTCAATTGTCAAATTTAATGTCCAGAAATATTACTTCTAGTTCTAATTCTGTCATTAATTTCACCTGGCATTGCATCAGGCAGTGGAGCACCAGACGGAACCCTGGATGATGTGGAGAGGATCAACTATTTGCAAAAATACATAGCAGCCACACTGAAAGCCATCAGGTGCTTAAGAATTATGTTCCACTGATTCTACTCTATCTCTAGTAGAATATTTCCATAAACTCTTTTTTGGTGCAAATCTGAAACTATAATCACAAGATGCCACTCATAGATCTTACTAGTGAACGACTAACTGATTGATCGTCGCAGGAATGGTGCGAATGTGAAGGGATACTCCATGTGGTCATTCATAGATATTTACGAGATATTTGGTGGGTATAACAGTTGGCATTATGGACTTGTTGCTGTCGATTTCGGCAGCACAGAACGGAGAAGGCAGCCGAGACGCTCTGCTAGCTGGTACTCAGACTTCTTGAAGAACAATGCTCCCATCAGGGTGGAGATGGCTCCTTTGTCTCTGCAGCCTCTCATGCTCAACTCTGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019787