BGIOSGA019789

From RiceWiki
Revision as of 02:57, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019789| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019789, complete gene.| tag = OsI_198...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019789

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019789, complete gene.

LocusTag

OsI_19812

Ensembl Transcript ID

BGIOSGA019789-TA

Ensembl Protein ID

BGIOSGA019789-PA

Length

5112

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19955981..19961092

Sequence Coding Region

19955981..19956109,19956263..19956316,19956409..19956453,19957005..19957144,19957666..19957831
,19957940..19958119,19958230..19958284,19958551..19958678,19959138..19959221
,19960748..19960873,19960955..19961092

Genome Context

<gbrowseImage1> name=IndicaChromosome05:19955981..19961092 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:19955981..19961092 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAATAGTTGCAGACTTTATGTTGGTTTGGCTTCCTGCTCCAACAGTGTCTCTGCAGCCACCACTAGCAGTAAATGCAGGATCTATTGCTAAATTCTTCCACAATTGCCCAGATAATGCCTTCCAGGTTGCTATGGCTGGAACATCATACTCCCTTTTGCAGCGCGTAGGAGCTATTATGAGGAATGGTGCAAAACTTTTTGCAGTGGGAACTAGTGCATCCCTGATTGGAACTGGTGTGACCAATGCACTGATAAAAGCACGAAAGGCTGTTAGTAAGGATTTTGAAGGGGAAAGCGAGGATATTCCAATTGTATCAACTAGTGTTGCCTATGGTGTATACATGGCCGTTTCCAGTAACCTCAGGGCGCCGTGCTCGAGGAGGAGCCAGGGGGAGCAGCAGGACGAGGGGCAGGAGCAGTACGACGACGACGACTACGACGACGGGTACGAGGGCGGACGCGGCCCCGCGTTCACGCCCCCCACCCGCCCGCGCACCGGCAAGGCCGCCCTTCCGCTCAAGCGCGACCGCACGAGGTCGAAGCGATTCCTGGAGATACAGAAGCTGAGGGAGAGCAAGAAGGAGCACGACGTGCCCACGGCCATCTCGCTGGTGAAGCAGATGGCCAGCGCCCGATTCGTCGAGTCCGCTGAGGCGCACTTCCGCATGAACCTCGACCCCAAGTACAACGACCAGCAGCTCCGCGCCACGGTTAATTTGCCCAAGGGGACGGGCCAGTCGGTGAAGATTGCGGTCCTCACACAAGGTGAGAAGATAGATCAAGCAAGAGCTGCGGGAGCTGATATTGTCGGTGGAGATGACCTGATTGACCAAATAAAAGGAGGATTTATGGAATTTGACAAGTTGATTGCATCACCTGATATGATGCCTAAGGTCGCCGGATTGGGAAAGATTCTAGGACCGAGAGGACTTATGCCTAACCCCAAAGCTGGGACTGTTTCTCCAAACATAACTCAGGCTATCGAAGAGTTCAAGAAAGGTAAAGTTGAATACAGAGTTGACAAGACAGGGATTGTTCACATTCCCTTTGGGAAGGTTGATTTTCCTGAAGAAGACCTTATTGCAAACTTCATGGCTGTTGTTCGCTCTGTCGAAAGGAACAAACCATCTGGTGCAAAGGGGATATACTGGAAAACGGCATACTTATGCTCATCAATGGGGCCTTCAATCAAGTTAAACATCAAAGAAATGCTTGACTATGGCTCAGAATCATCAGACTAA</cdnaseq>

Protein Sequence

<aaseq>MAIVADFMLVWLPAPTVSLQPPLAVNAGSIAKFFHNCPDNAFQVAMAGTSYSLLQRVGAIMRNGAKLFAVGTSASLIGTGVTNALIKARKAVSKDFEGESEDIPIVSTSVAYGVYMAVSSNLRAPCSRRSQGEQQDEGQEQYDDDDYDDGYEGGRGPAFTPPTRPRTGKAALPLKRDRTRSKRFLEIQKLRESKKEHDVPTAISLVKQMASARFVESAEAHFRMNLDPKYNDQQLRATVNLPKGTGQSVKIAVLTQGEKIDQARAAGADIVGGDDLIDQIKGGFMEFDKLIASPDMMPKVAGLGKILGPRGLMPNPKAGTVSPNITQAIEEFKKGKVEYRVDKTGIVHIPFGKVDFPEEDLIANFMAVVRSVERNKPSGAKGIYWKTAYLCSSMGPSIKLNIKEMLDYGSESSD</aaseq>

Gene Sequence

<dnaseqindica>1..129#283..336#429..473#1025..1164#1686..1851#1960..2139#2250..2304#2571..2698#3158..3241#4768..4893#4975..5112#ATGGCAATAGTTGCAGACTTTATGTTGGTTTGGCTTCCTGCTCCAACAGTGTCTCTGCAGCCACCACTAGCAGTAAATGCAGGATCTATTGCTAAATTCTTCCACAATTGCCCAGATAATGCCTTCCAGGTGACATAACAATAACCTCACATTGATCTGGGCATGTTTTAAGCTTATTTCCTCCTTTTCCTTTCGGCATAGATGTAAATTTTCCTTTTCAGAAGGAAAAATGTTTATCCTTTATTTAAAACTTGAAAATGAACTTAGTAACTTCTCCTGCAGGTTGCTATGGCTGGAACATCATACTCCCTTTTGCAGCGCGTAGGAGCTATTATGGTATCTTTCTGGCCCATATTGTGCACCTCACAGTTGAAATTGCATTATTTTAGCAGGTTGTTCCTATTATCTAACAATTTTGCTTCTTTCAGAGGAATGGTGCAAAACTTTTTGCAGTGGGAACTAGTGCATCCCTGGTAAGTTTGTCATAGTTGTGATTTCAGACAAAAAAACGACAGTCTATTTTCCTTATTATTAATTGGCATTAGTAGAACAAATTGCTTAGATTCTCGACTTGTTTGTGATGTGTGAGAAGTAATGTTTCATTGATAAAATAATACAATAAAGTAATATATAGGAGACTGTAGGATCTGCTTGGTCCTTTTCATGCATATTCAAAGTGCCGCCTAGTTGTTTATTCGAAAACCTTAAGGCCTGGAATGTACGACTCAATTAGTTTGTTGATGCTGTTAAGTTGGCTGTACAAATGTAATGACTCCAGGGCATTGGAATATCACTGTTCTTTTTGTTAATGTTAAAAGAAAGGAAAGAGCAATTATGCCTTCCAGAATGCCATATATATATTTTTAAAGGTAGATGGCACTTCAGACATTAAAATGTATGATTTATTGATGATACATTGTACTACTTTGTCTTAACACAACTTTTGGGTCATTTGTCACTTTTATTCATCCGCTTTCCAAGACTACTAGGAAAGCTTACACTGTGTATCCAATTTAATTTCCAGATTGGAACTGGTGTGACCAATGCACTGATAAAAGCACGAAAGGCTGTTAGTAAGGATTTTGAAGGGGAAAGCGAGGATATTCCAATTGTATCAACTAGTGTTGCCTATGGTGTATACATGGCCGTTTCCAGTAACCTCAGGTAACACATATATTTGTTTATACATTAATTCCCACGAATATAAATATCTGTTCATTTTACCTGATGAAAAGGGTAGCTCAAATGTTAGCTGCTCACTTCTTGACTGTTGGACATGTCTATCATTTTTTTTGTTGGATACTATTCTAAAATCTTTATGAAATCACATGATCTCTCCTATTTGTAAATCTAAATTAGAACTACTAGTTGTGCTCTATTGTATTTGTATATCACCGAAGAATCCCGGTCGTAGCTTCCTTGTCATTGTGAAGTACCAAATTCTAACATGAGAAACATGCCGACTCTTATAACTTTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCCCCGCCACCACCGGCGCCGCGGCGGCGCAGTGCTGCTCCTCCTCGTCCACCGCGCTGTTCCCCACCCCCGTCCCGTCGCTGCGCGCCTACTACCCGCGCCTGCTCCTCGCGTTCCGCCGCCCCGCCGTCGCCGCCGTCGCAGACCCGCAGGGCGCCGTGCTCGAGGAGGAGCCAGGGGGAGCAGCAGGACGAGGGGCAGGAGCAGTACGACGACGACGACTACGACGACGGGTACGAGGGCGGACGCGGCCCCGCGTTCACGCCCCCCACCCGCCCGCGCACCGGCAAGGCCGCCCTTCCGCTCAAGCGCGACCGCGTATGCCCCCCCCCCGAATCCAGCCTCCCCCCCGCGTGTTCATCCATTCGTGTTGATTTTTGGATTGACGCTGACGCCGCGTTCGCCTTTTTTTTGATGGGTTTGCAGACGAGGTCGAAGCGATTCCTGGAGATACAGAAGCTGAGGGAGAGCAAGAAGGAGCACGACGTGCCCACGGCCATCTCGCTGGTGAAGCAGATGGCCAGCGCCCGATTCGTCGAGTCCGCTGAGGCGCACTTCCGCATGAACCTCGACCCCAAGTACAACGACCAGCAGCTCCGCGCCACGGTTATTGCTCTTTCTCTCTGCTGTTGCCATTGTTACGTACGTTCTGTTCTGGCTTGTGTTTTATCAATCGTTTTTGATGATATTGGATCGGTTTTGGTGATGATGTGCAGGTTAATTTGCCCAAGGGGACGGGCCAGTCGGTGAAGATTGCGGTCCTCACACAAGGTGGGTTGCAATTACATTTTGGAGATTGTTATCGCAGCACCAATGCCAATTGCAATCTTTGGTGCATGGATTGATTAGGTCACTGCTAGTTGTGTCTTTTAGGTGTGGTTTGCCTGCTTGATCATGTGGTTATTTACGGTTCATTAAATTGGAAGCACGCTGTTATATAGTGAATTGAAATGGAAGTATATGAATGCGCTCTAGTCACTAAAGTGGTGCACTAATCACTAGCACTATGTAATGGCTATTGTCAAATATCCTTGCAGGTGAGAAGATAGATCAAGCAAGAGCTGCGGGAGCTGATATTGTCGGTGGAGATGACCTGATTGACCAAATAAAAGGAGGATTTATGGAATTTGACAAGTTGATTGCATCACCTGATATGATGCCTAAGGTATGGCATTAGCTGCATAACTCGTCTAAAACAATTCCAAGCATTATGAAGACTTGTCTTTTTGCATGTCTCCGACATAGTGTATCCCACATCCAAATGAACACGTTATGTTTCAGTGTTATTAGGAACCACAAAACCAGGCAACATTTAGTTGTATTGATCAGATATTGTTTTCTTATCATTACCTGCCATATCTGATCCATCCCTTCATATTACAAGTGTCTAGCATTTACGATTATGATTTGAGCCATAATGGAGATATGCAAATTTGGTTCACTCAGAGAAAATAGATTCGATAAGCAAATAAGGTTCTACTGTTTTGAATTGGTACATTCTTCGGAAGTTTGGATGCAGTTCTGCAATAAGTGTTGAGCTCCATGCAAGACCTGCATGGAAGTTTTAAAGGTGTGCTACTAGCTTGGCATATTATGTTGTTGATTTTGGTCTTTTGCTTCACAGGTCGCCGGATTGGGAAAGATTCTAGGACCGAGAGGACTTATGCCTAACCCCAAAGCTGGGACTGTTTCTCCAAACATAACTCAGGTACAATGGAAATTCTACAGATTACTATATGTATTGACACTGTTGCTTGTGGTTTTCTCTCCCATTTGCTTGGTTATTGTGACCCTGAGTGAAAGGTGGGTAACTGTCCATTTACCTTCTTTGATCCTTGGTGAACTTCTGTTTTATCCTCGTTCAATGCAATAGGCAGAACTCCTGCCCTTTTGTTCAAAGAAGTTGTCCATTTACGTCATCTCAGTACTTACCTCATAGATGCACTTCTGGGAGAAAACCTACTGATATATTGCTACCTTGTTTAGTAGTCTTCATTGTGTGTGCAATATATTTCAGTGGTTCGATTTTCAGACATGTTGATAGACATTTTTTTAACCTTGGTATTCGTAGATAGAAGGTTTGAAATTTTGTTTGTGCCAACTGAATTTGAGGATATGCATGGATGCATAGCTCCATCGTTCGTTTGTTGGCTTATCAACGGCAGCCAAAATCTGGATTTTGAAACTTAATTTAGAATTGATTTTGAGGGGTTTTTTTTATTGTGCTTTATTCTCCAGTGCTGGCTTTTGAATCGCTAAGAACATAGATATAGACGTTTTACTCAAAAGTTATTTTTGGTTGCTTCGTCATTTTTCCACGGCTTATCAGCCATAGAGCAAATGATCGTGTAATGACTGATGATGATGGTAATCTGCTACTTAGCCTGCATAGTGCCTCCGTAACAGTTATGTAAAGCATCACAACAAATCTGCAAAATAGAGAAAACAGGTAAAGTAGGCTACTTGACTGTTAGGAACAACCATCATTTATAACGGTTAACTGAAGGACAGGAGTGGGAGCATTTGTGAAAAATCTAGCCCTTTAGGTAATGAACCGGGCTATATTGTGCTCATATATCTATGAAAAGGGCCCAATTTCTCTAATTTAATACTTCAGTAGATAGATTCAAGGCTGCAATATACAAATGTAACCTTAGCATCAGCCATGACTACAATAATTGATTAATGCTCATACAGCTATTTTCAAATGAACATGGGAACCTCTAAATCTTGTCAATCCTCGTTGTCTCTATAAATTGTTCTTCAAATCAAGTCTGCCTAATGCCAACAATGGTTGAAGTTGTGTACCAGTCATCTTGTTCTATTCATGTTTCTACATGTAGAGAAATTCTAACTTTTGCCATTGACACACATGTAAAAGGATGTCATTGTTTATAATCATATAATGTCATTTGTGATTGTTGTACCAGTACAAAACTGAAGTATTTGAACATTTTGCTTGAAGTATTAAGTTGTAAATGGAGATTGACAGGGGCGGAGCTACATAGAGCTAGGGGGGTGCCCAGGAACCCGGTTGAAAATTTTTTTTAGCTATAGTTTGTCCATTTTCACCATATATATATACTCTGTCAGTTCAAATTTAGACACCCGTATCAAGCTAAATTTGATTCAAACTAGAGTAAAGCAAGCAAGTGGAATCCCCCTTCATTTTGTGCTAGCTCCGCCCCTAGAGATTGATTATGTTAATTATGTTAACTGTGGAAATGGTTTCAGGCTATCGAAGAGTTCAAGAAAGGTAAAGTTGAATACAGAGTTGACAAGACAGGGATTGTTCACATTCCCTTTGGGAAGGTTGATTTTCCTGAAGAAGACCTTATTGCAAACTTCATGGCTGTTGTTGTAAGATATCTGCTCGTATAAGCATCTTTATTGATGTAACTTAAAACCTATGCTGACCTGCCTTCTGCTATATCTTTACAGCGCTCTGTCGAAAGGAACAAACCATCTGGTGCAAAGGGGATATACTGGAAAACGGCATACTTATGCTCATCAATGGGGCCTTCAATCAAGTTAAACATCAAAGAAATGCTTGACTATGGCTCAGAATCATCAGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019789